BAC Information

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BAC

Clone NameB6Ng01-166G14
Chromosome3 (Build37)
Map Location 57,260,575 - 57,261,707
singlet/doubletsinglet
Overlap geneWwtr1
Upstream geneLOC100040139, LOC666585, Tm4sf1, LOC383862, Tm4sf4
Downstream geneCommd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2, EG433594, LOC100040216, 4921539H07Rik, Tsc22d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166G14.bB6Ng01-166G14.g
ACCDH958203DH958204
length1,1571,102
definitionDH958203|Mus musculus domesticus DNA, BAC clone: B6Ng01-166G14, 5' end.DH958204|Mus musculus domesticus DNA, BAC clone: B6Ng01-166G14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagataaacacctgaaaaaatg
ttcaacatccttaatcatcaaggaaatgaaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggta
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaattcctctcctgggc
acatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaag
gaactcgcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagacacaatttgctaaacgcatgaaattcaag
aagaacgaagaccaaagtgtggacactttgccccttcttagaaatggaaa
caaaacacccatggaaggagttacagagacaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatccaaggatccatcccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagctgtctcttgtgagactatgccagggcctagcaaac
acagaagtggatgatcacagtcagctattggatgggcacacggctcccaa
tggaggagctagagaaattacccaaggagctaaagggaactgcaacccta
taggtggacacatatgactaccagtacccagagctcttgtctctagctgc
atatgtatcaaagatggcttagtgcatcactgaagaaagtcatgactgca
acttttatgccagtacaggaacgcaggcaaagtgggaatgggtgtgttag
ggattgg
gaattcagtaaaattgtttcctaagtatactatcctaatccttttgctaa
attggtaagaaaaaaagtccaaggtatgtactcaatgcctcttatgtaac
caacatattatttgtttcgttagcttttaaggaccgagagcttcatgttc
ctctggcaggcaggccgcctgcacttggcaatgacgtccttagctgttta
gtattttgaactgacattatttataatctatgaatttaatctcttttttt
aatttttattttgaaagacatcaagaagctggaaggaagcttttagttgc
cgtgagggtgaaggcttctcggttgaggatcttcagtaagatcccttttg
atccattgaaatagaaacgcacagagtacatttgatcttggtgggaagag
gcaagttgaaaggtcagaggcaaagtagcagagccagggaaggtggcgga
aaggccaggtgatgtgaaattaagtagacatgtcagaacccctcaaagac
aaggcaagcaagacgtgtgagaagtgccccaaagtgctccgctgccttta
tgccaaaagacaccgctgttagagagaagagggtcagggtgcactttact
gggaagggcagaggaggaaggagtggggctgtgacattgtccatgtattg
gcagacgagaacatggactgctgttgctttcagcactcttaaagtgatct
ctctttttctgaaggaaccccaatttatgtccacgttaattccttgctct
ctctctgagcacttcaagagagacaagtaggaattttttgttgatactag
gttgaaagggagcactctttcgtttcctcttttgttagcaaaagttgcaa
aaagagttgtacattcttttctgaggaaaaccaaaaacaagccaaaaaca
caagggacctaacaaacttgacagtgtactatatttaaaatattttatag
atgcatgcagtatagtgtaaaacaagatactccttttttaaaaaaaatag
ttagtcatctatgattatgttaccagtttagagcaattttctatagctgt
ggcatatggatactaggaataatttctagtattagtttaaaacttttatt
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_57260575_57261707
seq2: B6Ng01-166G14.g_66_1167 (reverse)

seq1  TTAATTAAAAAGTTTTAAACTAATTTACTAAGAAAATTATT-CTAGTATT  49
      |||||  ||||||||||||||||  |||||   |||||||| |||||| |
seq2  TTAAT--AAAAGTTTTAAACTAA--TACTA--GAAATTATTCCTAGTA-T  43

seq1  TCATAATGCCACAAGCTTATTAGAAAATTGCTTCTAAAACTTGGTAACAT  99
       ||| ||||||| ||||   ||||||||||| ||||||   |||||||||
seq2  CCAT-ATGCCAC-AGCT--ATAGAAAATTGC-TCTAAA--CTGGTAACAT  86

seq1  AAATCATAGATGACTTAACTAATTTTTTTTTAAAAAAAGGAGTATCTTTT  149
       ||||||||||||| ||||||   ||||||| |||||||||||||||   
seq2  -AATCATAGATGAC-TAACTA---TTTTTTTTAAAAAAGGAGTATCT---  128

seq1  GTTTTTTACACTTAATAACCTGCAATGCATCTATAAAAATATTTTTAAAT  199
       | |||||||||  |||  |||| |||||||||| |||||| ||||||||
seq2  -TGTTTTACACT--ATA--CTGC-ATGCATCTAT-AAAATA-TTTTAAAT  170

seq1  ATAGTAACACTGTCAAGTTTTGTTAGGTCCCTTGTGTTTTTGGCTTGTTT  249
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATAGT-ACACTGTCAAG-TTTGTTAGGTCCCTTGTGTTTTTGGCTTGTTT  218

seq1  TTGGTTTTCCTCAG-AAAGAATGTACAACTCTTTTTTGCAACTTTTGCTA  298
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  TTGGTTTTCCTCAGAAAAGAATGTACAACTC-TTTTTGCAACTTTTGCTA  267

seq1  ACAAAAGAGGAAACGAAAGAGTGCTCCCTTTCAACCTAGTATCAACAAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGAGGAAACGAAAGAGTGCTCCCTTTCAACCTAGTATCAACAAAA  317

seq1  AATTCCTACTTGTCTCTCTTGAAGTGCTCAGAGAGAGAGCAAGGAATTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTACTTGTCTCTCTTGAAGTGCTCAGAGAGAGAGCAAGGAATTAA  367

seq1  CGTGGACATAAATTGGGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGACATAAATTGGGGTTCCTTCAGAAAAAGAGAGATCACTTTAAGAG  417

seq1  TGCTGAAAGCAACAGCAGTCCATGTTCTCGTCTGCCAATACATGGACAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAGCAACAGCAGTCCATGTTCTCGTCTGCCAATACATGGACAAT  467

seq1  GTCACAGCCCCACTCCTTCCTCCTCTGCCCTTCCCAGTAAAGTGCACCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGCCCCACTCCTTCCTCCTCTGCCCTTCCCAGTAAAGTGCACCCT  517

seq1  GACCCTCTTCTCTCTAACAGCGGTGTCTTTTGGCATAAAGGCAGCGGAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCTTCTCTCTAACAGCGGTGTCTTTTGGCATAAAGGCAGCGGAGC  567

seq1  ACTTTGGGGCACTTCTCACACGTCTTGCTTGCCTTGTCTTTGAGGGGTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGGGCACTTCTCACACGTCTTGCTTGCCTTGTCTTTGAGGGGTTC  617

seq1  TGACATGTCTACTTAATTTCACATCACCTGGCCTTTCCGCCACCTTCCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGTCTACTTAATTTCACATCACCTGGCCTTTCCGCCACCTTCCCT  667

seq1  GGCTCTGCTACTTTGCCTCTGACCTTTCAACTTGCCTCTTCCCACCAAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGCTACTTTGCCTCTGACCTTTCAACTTGCCTCTTCCCACCAAGA  717

seq1  TCAAATGTACTCTGTGCGTTTCTATTTCAATGGATCAAAAGGGATCTTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTACTCTGTGCGTTTCTATTTCAATGGATCAAAAGGGATCTTAC  767

seq1  TGAAGATCCTCAACCGAGAAGCCTTCACCCTCACGGCAACTAAAAGCTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATCCTCAACCGAGAAGCCTTCACCCTCACGGCAACTAAAAGCTTC  817

seq1  CTTCCAGCTTCTTGATGTCTTTCAAAATAAAAATTAAAAAAAGAGATTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGCTTCTTGATGTCTTTCAAAATAAAAATTAAAAAAAGAGATTAA  867

seq1  ATTCATAGATTATAAATAATGTCAGTTCAAAATACTAAACAGCTAAGGAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAGATTATAAATAATGTCAGTTCAAAATACTAAACAGCTAAGGAC  917

seq1  GTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATGAAGCTCTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGCCAAGTGCAGGCGGCCTGCCTGCCAGAGGAACATGAAGCTCTC  967

seq1  GGTCCTTAAAAGCTAACGAAACAAATAATATGTTGGTTACATAAGAGGCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTAAAAGCTAACGAAACAAATAATATGTTGGTTACATAAGAGGCA  1017

seq1  TTGAGTACATACCTTGGACTTTTTTTCTTACCAATTTAGCAAAAGGATTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTACATACCTTGGACTTTTTTTCTTACCAATTTAGCAAAAGGATTA  1067

seq1  GGATAGTATACTTAGGAAACAATTTTACTGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  GGATAGTATACTTAGGAAACAATTTTACTGAATTC  1102