BAC Information

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BAC

Clone NameB6Ng01-166I07
Chromosome3 (Build37)
Map Location 51,177,424 - 51,345,836
singlet/doubletdoublet
Overlap geneA630062H14, 4930583H14Rik, LOC669130, Ndufc1, Narg1, Rab33b, Setd7
Upstream geneSlc7a11, EG621304, LOC100039667, Ccrn4l, Elf2
Downstream geneLOC100039684, Mgst2, Maml3, LOC433587, LOC100039788, LOC671890, Olfr1398-ps1, Foxo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166I07.bB6Ng01-166I07.g
ACCDH958278DH958279
length1,0291,073
definitionDH958278|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I07, 5' end.DH958279|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,177,424 - 51,178,480)(51,344,772 - 51,345,836)
sequence
gaattctccaatacagatgtcaaaatttcccatggttccccagagtctca
acggcagatgctgtctaatccttagaaggtctcgccacactcagcagtct
gatcggggaatcaatgtccctttctttgcacatctttttagcaaacagga
atagattgcatattcctaccttccaggcaagaatgcaatcgacttagatt
tttttttttttaagttatatttgttatgtacacagtgttctgcctgcatg
ccagaagagggcaccagatctcattatagatagttctagactgataacct
ggcaccatgtgtttgctgggaattgaactcaggacctctggaagagcagc
tagtgcttttaacctctgagccacgacccatccctcaacttatatatata
tatatatatatatatattaagatttaatttaaattatgtgtattgtgtgt
gtctgctcatgacaaagcagctgctcccaaagatcagaagagggcatcag
atcccccagagctggttacctggtagcagtgatctggctgacctgggtgc
tggaaactgaactcaaacttttaggaaagcagcaagggttcttagccact
gagctacatttcccacccagaattatgtttccgtacacgaaagtcctaca
gcatcctgcagagatccaactattcacaaaggagaaaaacatgcctcatt
ttctggcacttatggctacagagatttttcagactttctttttttactaa
cagagcttatgtagggacagaaacacaaaggccagccaggcgtggtagcg
catgcctttagtcccagcactcgggaggcagaggcagtggatttccaagt
tcgaggccagcctggtctacaaagtgagttccaggacagccagggctata
cagagaaacccgtctcaaacaaaacaaacaaacaacaaccaacaaaagaa
cccaagacccttggatttatcagcacttatattaataacagtttaggatg
atatgtgccattttacaagtcggaatgcg
gaattcagcagtttctggtctttctggagttactacacccctgctggtaa
acagcaaacccccttaccccaaccccaaccccctccccgaactatctcac
cagctccactgttctttataaatcatttaattggctgaggagatggttca
gcagatattgctaaaggtaagtggatctgagttcaaatccccagaaagca
agtaaaaagcctggcttggtcccttatgcactcacaaggcttttacttgg
gtctcatgggagggtctctaggctggcatacctcaagttcagtgagaccc
tgtctctgggactaaagcagagagtggtagatcaggacacccagtgtcat
cctacacacacttggtttgtatttatttttgagacaagggtttcctattt
agtcctgactgtcctgtggctcactgtgtagatgagcctggccttgaact
cagagatccacctgcctctgcctccctagtgctaggatcagaggcgtgag
ccacacatgatcagccacacaattgtttgtttgtgttttcatcagttaag
ctcagtttatgcatgtgtgggcccagctactagggaagcctgagacgggt
atgcctgacagtttggggctggggagatggcccagcagttaagagtgcct
gttgttctatcatgaggactggagtttgaatcccagtattggaggctcca
agggatccaacaccctccccttcccactacccaaccttcccctgacacat
gaaatttttcaaaaagagctgtgccctaaggaaagatgtggtcactcttt
gtccaagatttcccaagcatttttttaggcatcttggtcagctctgaccc
atcagacatcagagttttaggtagaggcagagaagccgatactgggacca
aggtatctgcagtttcttgaaggggtgagagaggacttccgagtggccgg
gctgagctccaatgttgcttggagctggggtgctactgacttcttgagag
atctgtcagaaaagcgagcggagcctgtgtaggcaaaaggattgagaaag
agccagccgaacacagggattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_51177424_51178480
seq2: B6Ng01-166I07.b_47_1075

seq1  GAATTCTCCAATACAGATGTCAAAATTTCCCATGGTTCCCCAGAGTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAATACAGATGTCAAAATTTCCCATGGTTCCCCAGAGTCTCA  50

seq1  ACGGCAGATGCTGTCTAATCCTTAGAAGGTCTCGCCACACTCAGCAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCAGATGCTGTCTAATCCTTAGAAGGTCTCGCCACACTCAGCAGTCT  100

seq1  GATCGGGGAATCAATGTCCCTTTCTTTGCACATCTTTTTAGCAAACAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGGGGAATCAATGTCCCTTTCTTTGCACATCTTTTTAGCAAACAGGA  150

seq1  ATAGATTGCATATTCCTACCTTCCAGGCAAGAATGCAATCGACTTAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTGCATATTCCTACCTTCCAGGCAAGAATGCAATCGACTTAGATT  200

seq1  TTTTTTTTTTTAAGTTATATTTGTTATGTACACAGTGTTCTGCCTGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAAGTTATATTTGTTATGTACACAGTGTTCTGCCTGCATG  250

seq1  CCAGAAGAGGGCACCAGATCTCATTATAGATAGTTCTAGACTGATAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGAGGGCACCAGATCTCATTATAGATAGTTCTAGACTGATAACCT  300

seq1  GGCACCATGTGTTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCATGTGTTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGC  350

seq1  TAGTGCTTTTAACCTCTGAGCCACGACCCATCCCTCAACTTATATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTTTTAACCTCTGAGCCACGACCCATCCCTCAACTTATATATATA  400

seq1  TATATATATATATATATTAAGATTTAATTTAAATTATGTGTATTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATTAAGATTTAATTTAAATTATGTGTATTGTGTGT  450

seq1  GTCTGCTCATGACAAAGCAGCTGCTCCCAAAGATCAGAAGAGGGCATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTCATGACAAAGCAGCTGCTCCCAAAGATCAGAAGAGGGCATCAG  500

seq1  ATCCCCCAGAGCTGGTTACCTGGTAGCAGTGATCTGGCTGACCTGGGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCAGAGCTGGTTACCTGGTAGCAGTGATCTGGCTGACCTGGGTGC  550

seq1  TGGAAACTGAACTCAAACTTTTAGGAAAGCAGCAAGGGTTCTTAGCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTGAACTCAAACTTTTAGGAAAGCAGCAAGGGTTCTTAGCCACT  600

seq1  GAGCTACATTTCCCACCCAGAATTATGTTTCCGTACACGAAAGTCCTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACATTTCCCACCCAGAATTATGTTTCCGTACACGAAAGTCCTACA  650

seq1  GCATCCTGCAGAGATCCAACTATTCACAAAGGAGAAAAACATGCCTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTGCAGAGATCCAACTATTCACAAAGGAGAAAAACATGCCTCATT  700

seq1  TTCTGGCACTTATGGCTACAGAGATTTTTCAGACTTTCTTTTTTTACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCACTTATGGCTACAGAGATTTTTCAGACTTTCTTTTTTTACTAA  750

seq1  CAGAGCTTATGTAGGGACAGAAACACAAAGGCCAGCCAGGCGTGGTAGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTTATGTAGGGACAGAAACACAAAGGCCAGCCAGGCGTGGTAGCG  800

seq1  CATGCCTTTAGTCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCCAAG  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CATGCCTTTAGTCCCAGCACTCGGGAGGCAGAGGCA-GTGGATTTCCAAG  849

seq1  TTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTAT  899

seq1  ACAGAGAAACCCGGTCTCAAAAAACAAAAACAAAAACAAAAACAAAACAA  950
      |||||||||||| |||||||| || | ||||||               | 
seq2  ACAGAGAAACCC-GTCTCAAACAAAACAAACAA---------------AC  933

seq1  AACAAACAAAAAAGAAACACAAAGACCACTTGGGATTTATTCAAGCACTT  1000
      ||||| ||| |||  ||| | |||||| ||| ||||||||   |||||||
seq2  AACAACCAACAAAAGAAC-CCAAGACC-CTT-GGATTTAT--CAGCACTT  978

seq1  ATATTTAATAACAGTTTTAGGGAATGATATGTGCCCATTTTAACAAGTCT  1050
      ||| |||||||||| ||||||  |||||||||| ||||||| ||||||| 
seq2  ATA-TTAATAACAG-TTTAGG--ATGATATGTG-CCATTTT-ACAAGTCG  1022

seq1  GAATGCG  1057
      |||||||
seq2  GAATGCG  1029

seq1: chr3_51344772_51345836
seq2: B6Ng01-166I07.g_66_1138 (reverse)

seq1  GGAATCCCTGT-TTCGGCTGGCTCTCTCTC-ATCC-TCTGCCTACACAGG  47
      ||||||||||| ||||||||||||| |||| |||| | ||||||||||||
seq2  GGAATCCCTGTGTTCGGCTGGCTCTTTCTCAATCCTTTTGCCTACACAGG  50

seq1  CTCCGCTCACTTTTCTGACAAGTCTCTC-AGATGTCAGTAGCACCCCAGC  96
      |||||||| |||||||||||  |||||| ||| |||||||||||||||||
seq2  CTCCGCTCGCTTTTCTGACAGATCTCTCAAGAAGTCAGTAGCACCCCAGC  100

seq1  TCCAAGCAACA-TGGAGCTCAGCCCGGCCACTCGGAAGTCCTCTCTCA-C  144
      ||||||||||| |||||||||||||||||||||||||||||||||||| |
seq2  TCCAAGCAACATTGGAGCTCAGCCCGGCCACTCGGAAGTCCTCTCTCACC  150

seq1  CCTTC-AGAAACTGCAGGTACCTTGGTCCCAGTATCGGCTTCTCTGCCTC  193
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTTCAAGAAACTGCAGATACCTTGGTCCCAGTATCGGCTTCTCTGCCTC  200

seq1  TACCT-AGACTCTGATGTCTGATGGGTCAGAGCTGACCAAGATGCCT-AA  241
      ||||| | ||||||||||||||||||||||||||||||||||||||| ||
seq2  TACCTAAAACTCTGATGTCTGATGGGTCAGAGCTGACCAAGATGCCTAAA  250

seq1  AAAATGCTTGGGAAGTCTTGGACAAAGAGTGACCACATCTTTTCCTTAGG  291
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  AAAATGCTTGGGAAATCTTGGACAAAGAGTGACCACATC-TTTCCTTAGG  299

seq1  GCACAGCTCTTTTTGAAAAATTTCATGTGTCAGGGGAAGGTTGGGTAGTG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCTCTTTTTGAAAAATTTCATGTGTCAGGGGAAGGTTGGGTAGTG  349

seq1  GGAAGGGGAGGGTGTTGGATCCCTTGGAGCCTCCAATACTGGGATTCAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGGAGGGTGTTGGATCCCTTGGAGCCTCCAATACTGGGATTCAAA  399

seq1  CTCCAGTCCTCATGATAGAACAACAGGCACTCTTAACTGCTGGGCCATCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCCTCATGATAGAACAACAGGCACTCTTAACTGCTGGGCCATCT  449

seq1  CCCCAGCCCCAAACTGTCAGGCATACCCGTCTCAGGCTTCCCTAGTAGCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCCCAAACTGTCAGGCATACCCGTCTCAGGCTTCCCTAGTAGCT  499

seq1  GGGCCCACACATGCATAAACTGAGCTTAACTGATGAAAACACAAACAAAC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCACACATGCATAAACTGAGCTTAACTGATGAAAACACAAACAAAC  549

seq1  AATTGTGTGGCTGATCATGTGTGGCTCACGCCTCTGATCCTAGCACTAGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGTGGCTGATCATGTGTGGCTCACGCCTCTGATCCTAGCACTAGG  599

seq1  GAGGCAGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGGCTCATCTACACA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGTGGATCTCTGAGTTCAAGGCCAGGCTCATCTACACA  649

seq1  GTGAGCCACAGGACAGTCAGGACTAAATAGGAAACCCTTGTCTCAAAAAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCACAGGACAGTCAGGACTAAATAGGAAACCCTTGTCTCAAAAAT  699

seq1  AAATACAAACCAAGTGTGTGTAGGATGACACTGGGTGTCCTGATCTACCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAACCAAGTGTGTGTAGGATGACACTGGGTGTCCTGATCTACCA  749

seq1  CTCTCTGCTTTAGTCCCAGAGACAGGGTCTCACTGAACTTGAGGTATGCC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGCTTTAGTCCCAGAGACAGGGTCTCACTGAACTTGAGGTATGCC  799

seq1  AGCCTAGAGACCCTCCCATGAGACCCAAGTAAAAGCCTTGTGAGTGCATA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGAGACCCTCCCATGAGACCCAAGTAAAAGCCTTGTGAGTGCATA  849

seq1  AGGGACCAAGCCAGGCTTTTTACTTGCTTTCTGGGGATTTGAACTCAGAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCAAGCCAGGCTTTTTACTTGCTTTCTGGGGATTTGAACTCAGAT  899

seq1  CCACTTACCTTTAGCAATATCTGCTGAACCATCTCCTCAGCCAATTAAAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTACCTTTAGCAATATCTGCTGAACCATCTCCTCAGCCAATTAAAT  949

seq1  GATTTATAAAGAACAGTGGAGCTGGTGAGATAGTTCGGGGAGGGGGTTGG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATAAAGAACAGTGGAGCTGGTGAGATAGTTCGGGGAGGGGGTTGG  999

seq1  GGTTGGGGTAAGGGGGTTTGCTGTTTACCAGCAGGGGTGTAGTAACTCCA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGGTAAGGGGGTTTGCTGTTTACCAGCAGGGGTGTAGTAACTCCA  1049

seq1  GAAAGACCAGAAACTGCTGAATTC  1065
      ||||||||||||||||||||||||
seq2  GAAAGACCAGAAACTGCTGAATTC  1073