BAC Information

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BAC

Clone NameB6Ng01-166M14
Chromosome3 (Build37)
Map Location 41,059,202 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166M14.bB6Ng01-166M14.g
ACCDH958465DH958466
length1,0221,173
definitionDH958465|Mus musculus domesticus DNA, BAC clone: B6Ng01-166M14, 5' end.DH958466|Mus musculus domesticus DNA, BAC clone: B6Ng01-166M14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttttactctgagccccattttttaatggggctatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttagcatcggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattaacagtgtcttttgctttacagaagcttagcaatttta
tgaggtcccatttgtcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaattgttcccctgtgcccatatctccaaggcttttccccac
tttctcctctataagtttcagtgtctctggtttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagataggaatggatcaattcgaa
ttcttctacatgttaacctccagttgtgccagcaccatttgttgaaaatg
ctgtcgttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggtttatttctgggtcttcaattctattccattga
tctacatgtacgtcattgtactagtaccatgcagtttttatcacaattgc
tctgtagtacagctttagggtaggaatggtgattccaccagaggttcttt
tatccatgagaagagttgctatcctaggttttttgttattccagatgaat
ttgcagattgctctttctaattcgttgaagaattgagttggaattttaat
ggggattgcagtgaatctgtacattgcttttggcaagacagccattttta
ctatattgatcctgccaatccatgagcatgggagatctttccatcttctg
agatcttctttaatctctttcttcagagacttgaaattcttatcatacag
atctttcacttccttacttagagtcacgccaaggtattttatattatttg
tgactattgagaaggtgttgttctctaattcttctcagcctgtttatctt
tgtgtagagaaggccattgact
gaattctttgtttagctctgtaccccatttttaatagggttatttggttc
tccagagtcttaacttcttgagttctttgtgtatattggatattagccct
ctatccgatgtaggattggtaaatatcttttaccaatcagttggttgcca
ttttgtcctattgacagtgtcctttgccttacagaagctttgtaattttg
aggtcccatgtgccaattcttgatcttagagcataagctaatggtgttct
gttcaggaaaatttcccctgtgtgttgggagccattaaggcaacgctatt
gtcctgatctctgaattgggcctctccccccaagaagaaaagagggtcaa
aagcgggccaccgacacatggattccgagaaccatgggaggttccagccc
taggtcatcactgatgtcctgaccacaccctgataccaccaagttcctgc
ttccccgtgtaactgcctaagaatgtgcaattctattgccccccatccac
tgataattacttccccttttgcttgtattgcccaacccctcccactgata
agtatctgtacttccccctttgcttgtgcatttaaaccttggacctttct
caatacattggggtcttgatacaacttcagaacggtttccgtgtcgttat
tcgtacaagaccctcgtctctctctaccccccatttggttattaggagga
ggtcccctcgagatcctcgaataactggacctgctggacgggtcaagtgg
cgcccgacgtggagcacgaggtacgactgccctccggacaacggattaaa
ggattaaagaggtaccgcgcagactgagaaacagtgggacagtccaccga
cacttcactcgagtgtcgagtacggacgtcgggaggtaagcctaggcatt
caattgttgtcccattaccatggggcatttagtgagagataaaggttctc
ttagagagagggatagagtttttaaaaagggaatttataaatattttttg
tttgtgacagagatgtcatggctgtttaatgttctgaaactagaataagg
taagcagaaattcatagttataaaacaggaagatgtccattagttctttt
aagtttatggaatcatcgaattcctgacagcgaatgcgaaatggtctcgc
tcttgtcctatctgagagagtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059202_41059737
seq2: B6Ng01-166M14.b_47_583 (reverse)

seq1  AATTGAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGATCTTCG  50
      |||||||||| ||||||  || |||||||||||||||||||||||||| |
seq2  AATTGAAGACCCAGAAATAAACCCACACACCTATGGTCACTTGATCTTTG  50

seq1  ACAAGGGAGCTAAAACCATCCAGTGGAAAAAA-GACAGCATTTTCAACAA  99
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACAAGGGAGCTAAAACCATCCAGTGGAAAAAACGACAGCATTTTCAACAA  100

seq1  ATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATC  149
      |||||||||||||||||||  |||| ||||||||||||| ||||||||||
seq2  ATGGTGCTGGCACAACTGGAGGTTAACATGTAGAAGAATTCGAATTGATC  150

seq1  CACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGC  199
      || ||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  CATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTC  200

seq1  CACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAG  249
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAT-AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAG  249

seq1  CCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGG  299
      ||||| |||||||| |||||||||| |||||||| |||||||||||||||
seq2  CCTTGGAGATATGGGCACAGGGGAACAATTCCTGAATAGAACAGCAATGG  299

seq1  CTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAA  349
      |||||||||||||||  ||||| ||||||||||||||||| ||| ||| |
seq2  CTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTGCTA  349

seq1  AGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGG-CACCAAC  398
      |||||||| || ||||||||||| || ||||||||||||||| |||||||
seq2  AGCTTCTGTAAAGCAAAAGACACTGTTAATAAGACAAAAAGGCCACCAAC  399

seq1  AGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATAT  448
      |||||||||||||||||||||| || ||||||||||||||||||||||||
seq2  AGATTGGGAAAGGATCTTTACCGATGCTAAATCAGATAGGGGACTAATAT  449

seq1  CCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAATAAC  498
      ||||||||||| ||||||||||||||||||| |||||||||||||||| |
seq2  CCAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAGC  499

seq1  CCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  536
      ||||||||||||||||||||||||  ||||||||||||
seq2  CCCATTAAAAAATGGGGCTCAGAGTAAAACAAAGAATT  537