BAC Information

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BAC

Clone NameB6Ng01-167C18
Chromosome3 (Build37)
Map Location 105,673,475 - 105,674,251
singlet/doubletsinglet
Overlap geneAdora3
Upstream geneSt7l, LOC100043572, Wnt2b, Cttnbp2nl, 4930564D02Rik, 1700095B22Rik, Kcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637
Downstream geneI830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819, LOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070, 2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167C18.bB6Ng01-167C18.g
ACCDH958740DH958741
length1,183777
definitionDH958740|Mus musculus domesticus DNA, BAC clone: B6Ng01-167C18, 5' end.DH958741|Mus musculus domesticus DNA, BAC clone: B6Ng01-167C18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggctaggatgtggagaaagaggaacactcctccactgttggtg
ggattacaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgttccaagtggtaagaaggacacatgctccactat
gttcattgcagccttatttataatatccagaagctggaaaaaacccagat
gtccctcacagaggaatggatatagacaatgtggtacatttacacaatgg
agtactactcagctattaaaaagagtgtatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaaa
aaactcacacaacatgtactcactgataagtggatcttagcccagaaact
tagaatgcccaagatacaagatacaatctgcaaacacatgaaactcaaga
agaacgaagaccaaaatgtggacactttgcaacttcttagaattgggaac
aaaacacccattgaaggagttacagagacaaagtttggagctgagacaaa
aggatggtccatctagagactgccatatccagggatccatcccataatta
gcctccaagcgatgacaccattgcatacactagcaagcctttgttgcaag
gacggtgatatagctgtcccttgtgagactaggccggggcctagcaaact
cagaagtggatgctcacagtcaactattggatggatcacaggcccccaat
ggaggagctagagaaagtatccaggagctaaagagatctgcaccctattt
gaggaacacattatgactaccagtaccccagagctcttgacttatagctg
catatgtatcaaagatgacctagttggccatcactgcaagggaggccatg
gttcagccaaacgttatattgctccaggtacaaggaatgcccagagccta
aaatggaatgggttgggtaagggagagtgtgcg
gaattccaaatcagacatgtcttccttagttgtggtgaaataaaactgat
tttcttgaaattgctcttttagacactgtaagtttaaattgccttctttc
taaaattttccaagtcatcacaaaaggcctagagttctctgacagtttgc
tgtaagaggcttcacggtgctacatggactttttggcaaacatggctttg
atttctcccagagagaagtttcccctttaaaagcctgctctgtgatcata
attgatcacagacaagcacctgtgtcataattgctgctgacatagcagcc
cgcatcaccggaggatgcctgggtgtcagcttgccttcaggtgctcagct
agacttcatcaagcacatgtggagagctctgtattaggttaatgtgctaa
cattaacactggtgagcaaagtatgatcctcgtgctcaaaacgctgagaa
tccaggtaagcagagcagataagcaaagatgcttacggcccttcaatcag
tcttggactggaagtgaatgatcagagttaggagacgatattatcccgac
attggataataagacttttaaagtgagtaggtgactcctgatcctagacc
tagagggattagtttaactttaccaagaatgagtggaactggtgtctgtc
atgttatatgtctgtaatcccagcacttgatggccaaggcagaatcatga
gttcaaatccccccatcttgggcttgtcagagagattgggttcgggggta
ggggagagaaaggggagaattatggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_105673475_105674251
seq2: B6Ng01-167C18.g_67_843

seq1  GAATTCCAAATCAGACATGTCTTCCTTAGTTGTGGTGAAATAAAACTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATCAGACATGTCTTCCTTAGTTGTGGTGAAATAAAACTGAT  50

seq1  TTTCTTGAAATTGCTCTTTTAGACACTGTAAGTTTAAATTGCCTTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGAAATTGCTCTTTTAGACACTGTAAGTTTAAATTGCCTTCTTTC  100

seq1  TAAAATTTTCCAAGTCATCACAAAAGGCCTAGAGTTCTCTGACAGTTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTCCAAGTCATCACAAAAGGCCTAGAGTTCTCTGACAGTTTGC  150

seq1  TGTAAGAGGCTTCACGGTGCTACATGGACTTTTTGGCAAACATGGCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAGGCTTCACGGTGCTACATGGACTTTTTGGCAAACATGGCTTTG  200

seq1  ATTTCTCCCAGAGAGAAGTTTCCCCTTTAAAAGCCTGCTCTGTGATCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCCCAGAGAGAAGTTTCCCCTTTAAAAGCCTGCTCTGTGATCATA  250

seq1  ATTGATCACAGACAAGCACCTGTGTCATAATTGCTGCTGACATAGCAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCACAGACAAGCACCTGTGTCATAATTGCTGCTGACATAGCAGCC  300

seq1  CGCATCACCGGAGGATGCCTGGGTGTCAGCTTGCCTTCAGGTGCTCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATCACCGGAGGATGCCTGGGTGTCAGCTTGCCTTCAGGTGCTCAGCT  350

seq1  AGACTTCATCAAGCACATGTGGAGAGCTCTGTATTAGGTTAATGTGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCATCAAGCACATGTGGAGAGCTCTGTATTAGGTTAATGTGCTAA  400

seq1  CATTAACACTGGTGAGCAAAGTATGATCCTCGTGCTCAAAACGCTGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAACACTGGTGAGCAAAGTATGATCCTCGTGCTCAAAACGCTGAGAA  450

seq1  TCCAGGTAAGCAGAGCAGATAAGCAAAGATGCTTACGGCCCTTCAATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTAAGCAGAGCAGATAAGCAAAGATGCTTACGGCCCTTCAATCAG  500

seq1  TCTTGGACTGGAAGTGAATGATCAGAGTTAGGAGACGATATTATCCCGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGACTGGAAGTGAATGATCAGAGTTAGGAGACGATATTATCCCGAC  550

seq1  ATTGGATAATAAGACTTTTAAAGTGAGTAGGTGACTCCTGATCCTAGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATAATAAGACTTTTAAAGTGAGTAGGTGACTCCTGATCCTAGACC  600

seq1  TAGAGGGATTAGTTTAACTTTACCAAGAATGAGTGGAACTGGTGTCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGATTAGTTTAACTTTACCAAGAATGAGTGGAACTGGTGTCTGTC  650

seq1  ATGTTATATGTCTGTAATCCCAGCACTTGATGGCCAAGGCAGAATCATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATATGTCTGTAATCCCAGCACTTGATGGCCAAGGCAGAATCATGA  700

seq1  GTTCAAATCCCCCCATCTTGGGCTTGTCAGAGAGATTGGGTTCGGGGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAATCCCCCCATCTTGGGCTTGTCAGAGAGATTGGGTTCGGGGGTA  750

seq1  GGGGAGAGAAAGGGGAGAATTATGGTA  777
      |||||||||||||||||||||||||||
seq2  GGGGAGAGAAAGGGGAGAATTATGGTA  777