BAC Information

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BAC

Clone NameB6Ng01-167C20
Chromosome3 (Build37)
Map Location 43,097,150 - 43,098,223
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039204, LOC100039219, LOC677788
Downstream geneLOC100039264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167C20.bB6Ng01-167C20.g
ACCDH958744DH958745
length1,2561,070
definitionDH958744|Mus musculus domesticus DNA, BAC clone: B6Ng01-167C20, 5' end.DH958745|Mus musculus domesticus DNA, BAC clone: B6Ng01-167C20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgtttagatctgtactccattttctaagttggttatttcaat
tgttgatgacttgtttcatgagttctttatatattttggatgttaaccct
ctgtcagatgtacagttggtgaaaattttttcttattttgtatattgcca
ttttgtctcattgatagtgacctttgtcttatagaagattttcagtttca
tgaggtccaatttattaattgttgatctttgtaaatgagctattggtttt
ctgttcaggaatttgtatcctgtgccattttcttcaaggatatttttcac
tttatctttcagatttagtgtttctggcttttgtttgtctgttttgttag
gggtattttgttattgttgttgctgttgttgctgaggtctttgatccttt
cggacttgagttttgggtagggcactcaatatgaatctatttgcattctt
ctatatgcagatatccaattagactagcaatgtttattgtagatgtttct
cctttcaattgtatagtttgggtttatttttcaaaaatcaagtgtccaaa
ggtatgtggattaacttttggttctttcattcagttttgttaatcaacct
gtttgtttttgtgctagtaccatgaggattttattactattattctgctg
ttcagtttgagagcaggaattgtgataccaccagaagttattttattgta
aatgattactttacatatccttattttttccacataatattgaatattaa
tctcttagggtccataagaattgtgtcagaatttagatatgggtatcatt
aaatctgtagattgatttcagcagaatggtcattttattgtgttattcct
gctgattcatgggcatgagagatctttccatctgctgatatcttcttaga
gttctttcttcaagagttgcagatcttgtcattcaagtttttgacttatt
atttcagtcacacaatgtatttatattttgtgactattgatgtttcctca
tttttctcttagctttttattatttattaatagcatggctacagattttt
ttctttttttattaatcttgaatccagtcactttctgaaggtgtttattt
gtggtaaggcattctccggatgcaattggggtatttaaatcactcatatt
ttggagtgaatagcaatttatcctccagattggtaaccttgaatctctgc
gacgtaatcctggaatcccctgtcgtgccctattgtctctgatgaatact
ctcgac
gaattcttttgacactttctttggcattttaatgaaagcaaattgcaaat
gtcagaatgtgtcaatgagactaatcttactccaatcaataaaaataaaa
cttgatgtacacagttggaaactaaggaaaaatggtgatgtggttgttca
acaggaataaactctatggataaactggacttcctgcaaagctgagcatg
gatagatagcagcctttcaaagacacatacaggctccatctcatctgcat
ttatatttttgttgtgttgctttaaattcaagactccttatcgtactcta
aaaggcatatttcacttatttttatcatatgactaatactgtccagtata
tagggtattgttaagtaacattaaatcgatataaaaagtttaaggtctgg
tatgttgttttctggtgtgtgtgtgtgtgtgtgtgtataaatttaccctt
tttaaattcctgctacttcatgaaatatgttatcaatttgagaacatgac
aaaatatttttcttttaatttttgttttattttatattttattatagata
aataaattttgttcataaaactttataaatttaggataattttatctttt
tatatctttgttttatgccaaacagttattaagtaagtctgacaaaatta
gatcttgggttgtcctttagtaaagattttattttttgttgatataaaat
tcaagtgctagacagatggcttagcaattaagataactgtacactgctct
tacaatggactttgtgttcatttcccagcacacacatttggcatctcaca
accacctttaaataaagctcctttattgaatctatgctctagtaggttga
ttacagccaactggaagtattctccaagatgtgaccgtgctacttctttt
aaagaaagaagaaatgataaatattgatatttttcactatgtcatgggca
cagtatcatacgttgctctttagtgaaaacaagcatctgaagtggcattt
gagaaataacttatctccattgagcaatggctgcatactgccctttattc
atcactgtgttatactattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_43097150_43098223
seq2: B6Ng01-167C20.g_66_1135 (reverse)

seq1  AAATAGTTATACACAGTGATTGATAAAAGGGCAGTAATGCAGCCATTGCT  50
      |||||||   ||||||||| |||  |||||||||| ||||||||||||||
seq2  AAATAGTATAACACAGTGA-TGAATAAAGGGCAGT-ATGCAGCCATTGCT  48

seq1  CAATGGAGATAAGTTATTTCTCAAATACCACTTCAAGATGCTTGTATACA  100
      |||||||||||||||||||||||||| ||||||| |||||||||| | ||
seq2  CAATGGAGATAAGTTATTTCTCAAATGCCACTTC-AGATGCTTGTTTTCA  97

seq1  CTAAAGAGCAACGTATGATACTGTGCCCATGACATAGTGTATAAATATCA  150
      ||||||||||||||||||||||||||||||||||||||| | ||||||||
seq2  CTAAAGAGCAACGTATGATACTGTGCCCATGACATAGTG-AAAAATATCA  146

seq1  ATATTTATCATTTTCTTCTTTCTTTAAAAGAAGTAGCACGGTCACATCTT  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATCA-TTTCTTCTTTCTTTAAAAGAAGTAGCACGGTCACATCTT  195

seq1  GGAGAATACTTCCAGTTGGCTGTAATCAACCTACTAGAGCATAGATTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATACTTCCAGTTGGCTGTAATCAACCTACTAGAGCATAGATTCAA  245

seq1  TAAAGGAGCTTTATTTAAAGGTGGTTGTGAGATGCCAAATGTGTGTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAGCTTTATTTAAAGGTGGTTGTGAGATGCCAAATGTGTGTGCTG  295

seq1  GGAAATGAACAC-AAGTCCATTGTAAGAGCAGTGTACAGTTATCTTAATT  349
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAACACAAAGTCCATTGTAAGAGCAGTGTACAGTTATCTTAATT  345

seq1  GCTAAGCCATCTGTCTAGCACTTGAATTTTATATCAACAAAAAATAAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCCATCTGTCTAGCACTTGAATTTTATATCAACAAAAAATAAAAT  395

seq1  CTTTACTAAAGGACAACCCAAGATCTAATTTTGTCAGACTTACTTAATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTAAAGGACAACCCAAGATCTAATTTTGTCAGACTTACTTAATAA  445

seq1  CTGTTTGGCATAAAACAAAGATATAAAAAGATAAAATTATCCTAAATTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGGCATAAAACAAAGATATAAAAAGATAAAATTATCCTAAATTTA  495

seq1  TAAAGTTTTATGAACAAAATTTATTTATCTATAATAAAATATAAAATAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTTATGAACAAAATTTATTTATCTATAATAAAATATAAAATAAA  545

seq1  ACAAAAATTAAAAGAAAAATATTTTGTCATGTTCTCAAATTGATAACATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATTAAAAGAAAAATATTTTGTCATGTTCTCAAATTGATAACATA  595

seq1  TTTCATGAAGTAGCAGGAATTTAAAAAGGGTAAATTTATACACACACACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAAGTAGCAGGAATTTAAAAAGGGTAAATTTATACACACACACA  645

seq1  CACACACACACCAGAAAACAACATACCAGACCTTAAACTTTTTATATCGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACCAGAAAACAACATACCAGACCTTAAACTTTTTATATCGA  695

seq1  TTTAATGTTACTTAACAATACCCTATATACTGGACAGTATTAGTCATATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTTACTTAACAATACCCTATATACTGGACAGTATTAGTCATATG  745

seq1  ATAAAAATAAGTGAAATATGCCTTTTAGAGTACGATAAGGAGTCTTGAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAAGTGAAATATGCCTTTTAGAGTACGATAAGGAGTCTTGAAT  795

seq1  TTAAAGCAACACAACAAAAATATAAATGCAGATGAGATGGAGCCTGTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCAACACAACAAAAATATAAATGCAGATGAGATGGAGCCTGTATG  845

seq1  TGTCTTTGAAAGGCTGCTATCTATCCATGCTCAGCTTTGCAGGAAGTCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGAAAGGCTGCTATCTATCCATGCTCAGCTTTGCAGGAAGTCCA  895

seq1  GTTTATCCATAGAGTTTATTCCTGTTGAACAACCACATCACCATTTTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCCATAGAGTTTATTCCTGTTGAACAACCACATCACCATTTTTCC  945

seq1  TTAGTTTCCAACTGTGTACATCAAGTTTTATTTTTATTGATTGGAGTAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTCCAACTGTGTACATCAAGTTTTATTTTTATTGATTGGAGTAAG  995

seq1  ATTAGTCTCATTGACACATTCTGACATTTGCAATTTGCTTTCATTAAAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCTCATTGACACATTCTGACATTTGCAATTTGCTTTCATTAAAAT  1045

seq1  GCCAAAGAAAGTGTCAAAAGAATTC  1074
      |||||||||||||||||||||||||
seq2  GCCAAAGAAAGTGTCAAAAGAATTC  1070