BAC Information

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BAC

Clone NameB6Ng01-167E13
Chromosome3 (Build37)
Map Location 18,214,253 - 18,215,494
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1
Downstream geneLOC622921, LOC100040153, Armc1, Mtfr1, Pde7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167E13.bB6Ng01-167E13.g
ACCDH958823DH958824
length1,197369
definitionDH958823|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E13, 5' end.DH958824|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcaaaatgaaaactataagattgagcaagctacctttaagta
acaggagaattgagttgtctaataataaattagagatttgttttacttga
tgatttcattttgccaataaggcataaacagttaaagaattaaaacatac
agactatccacctgaaagcatacagaatatccacgtgtagttaatgatgc
agcatttcatcttaatcttctgtcataagaagactattgtctgtcaccta
aaactatagctttttacttagttagttttattttatgcggggagttttaa
ttaatataaaatattgacactttaatattaatatctttattaaatatttt
ctattttaataataataaaagattttctccctgcccacttttctccaaac
cttgtcatagacctctccatgctctccttcaaattcaccgcctcttattt
ttctaatcattatgtaatacaataatataatattaatacaattattgtaa
taatataatattaatataattattaccaaaattaatgttataattattat
atatcatcatatattcctaagtacaacctactcagtctgtataatgtcac
ataaatgtatgtttttagagccaactgcttgacattggacaatgagtaac
tgttctttcctgggaatgatcacccctcccatcctcagctttccttggtt
atagataggtctttgtgttgggttaagaatgtagtggtggcacacataca
ttggcagtaaccaacagcattttattttgaagtatagttggatttgaggt
taagataatccaaacaccaatggttggagactggctagcagcagaaagct
tgtgagtgttttaaagtcagtacagtatctcctgtcaccagagtttggat
cttagccattctgactggtgtgaggtggaatctcaggttgttttgatttg
catttccctgatgactagatgttgaacattttttttagtgtttctcagcc
attcgtatctcagtgagaattctttgttagctttgtacccattttagata
gttatttgtttctctggagtctaactctgagtcttgataaatggatatta
ccctctatcgaattaggatggtaagatcttcccaatgattgatgctttcg
tcaatgcggtctggctacgaagctttgcaatttataaggtcctttgt

agtttgtttgttttttttaaagcacataaagttggaattgaaaaatagag
gaggctgggatggagttagagggggaaggaatggggattagatttgatca
aaacacattgtaacaatacataaaattctcaaaaataaaaatattaaaaa
tctactaccagtatatacatatatatatacatacatacgatagatagata
gatagatagatagatagatagatagatagatagatagatagatagacaga
cagatagatagccagtgagatgacttgtaaatctccagtacacaatcctg
atcatctgagtttaattcttaaaacctagataatattggaaggagataac
caagtcacataggtgtcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18214253_18215494
seq2: B6Ng01-167E13.b_48_1244

seq1  GAATTCTCTCAAAATGAAAACTATAAGATTGAGCAAGCTACCTTTAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAAAATGAAAACTATAAGATTGAGCAAGCTACCTTTAAGTA  50

seq1  ACAGGAGAATTGAGTTGTCTAATAATAAATTAGAGATTTGTTTTACTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAATTGAGTTGTCTAATAATAAATTAGAGATTTGTTTTACTTGA  100

seq1  TGATTTCATTTTGCCAATAAGGCATAAACAGTTAAAGAATTAAAACATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATTTTGCCAATAAGGCATAAACAGTTAAAGAATTAAAACATAC  150

seq1  AGACTATCCACCTGAAAGCATACAGAATATCCACGTGTAGTTAATGATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATCCACCTGAAAGCATACAGAATATCCACGTGTAGTTAATGATGC  200

seq1  AGCATTTCATCTTAATCTTCTGTCATAAGAAGACTATTGTCTGTCACCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCATCTTAATCTTCTGTCATAAGAAGACTATTGTCTGTCACCTA  250

seq1  AAACTATAGCTTTTTACTTAGTTAGTTTTATTTTATGCGGGGAGTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAGCTTTTTACTTAGTTAGTTTTATTTTATGCGGGGAGTTTTAA  300

seq1  TTAATATAAAATATTGACACTTTAATATTAATATCTTTATTAAATATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAAAATATTGACACTTTAATATTAATATCTTTATTAAATATTTT  350

seq1  CTATTTTAATAATAATAAAAGATTTTCTCCCTGCCCACTTTTCTCCAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTAATAATAATAAAAGATTTTCTCCCTGCCCACTTTTCTCCAAAC  400

seq1  CTTGTCATAGACCTCTCCATGCTCTCCTTCAAATTCACCGCCTCTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCATAGACCTCTCCATGCTCTCCTTCAAATTCACCGCCTCTTATTT  450

seq1  TTCTAATCATTATGTAATACAATAATATAATATTAATACAATTATTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATCATTATGTAATACAATAATATAATATTAATACAATTATTGTAA  500

seq1  TAATATAATATTAATATAATTATTACCAAAATTAATGTTATAATTATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAATATTAATATAATTATTACCAAAATTAATGTTATAATTATTAT  550

seq1  ATATCATCATATATTCCTAAGTACAACCTACTCAGTCTGTATAATGTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATCATATATTCCTAAGTACAACCTACTCAGTCTGTATAATGTCAC  600

seq1  ATAAATGTATGTTTTTAGAGCCAACTGCTTGACATTGGACAATGAGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTATGTTTTTAGAGCCAACTGCTTGACATTGGACAATGAGTAAC  650

seq1  TGTTCTTTCCTGGGAATGATCACCCCTCCCATCCTCAGCTTTCCTTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTCCTGGGAATGATCACCCCTCCCATCCTCAGCTTTCCTTGGTT  700

seq1  ATAGATAGGTCTTTGTGTTGGGTTAAGAATGTAGTGGTGGCACACATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGGTCTTTGTGTTGGGTTAAGAATGTAGTGGTGGCACACATACA  750

seq1  TTGGCAGTAACCAACAGCATTTTATTTTGAAGTATAGTTGGATTTGAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGTAACCAACAGCATTTTATTTTGAAGTATAGTTGGATTTGAGGT  800

seq1  TAAGATAATCCAAACACCAATGGTTGGAGACTGGCTAGCAGCAGGAAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAAGATAATCCAAACACCAATGGTTGGAGACTGGCTAGCAGCA-GAAAGC  849

seq1  TTGTGAGTGTTTTAAAGTCAGTACAGTATCTCCTGTCACCAGAGTTTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGTGTTTTAAAGTCAGTACAGTATCTCCTGTCACCAGAGTTTGGA  899

seq1  TCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATT  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCA-GGTTGTTTTGATT  948

seq1  TGCATTTCCCTGATGACTAAGGATGTTGAACATTTTTTTTAGGTGTTTCT  1000
      |||||||||||||||||||  |||||||||||||||||||| ||||||||
seq2  TGCATTTCCCTGATGACTA--GATGTTGAACATTTTTTTTA-GTGTTTCT  995

seq1  CAGCCATTCGGTATTCCTCAGTTGAGAATTCTTTGTTTAGCTTTGTACCC  1050
      ||||||||| ||||  ||||| ||||||||||||| ||||||||||| ||
seq2  CAGCCATTC-GTAT--CTCAG-TGAGAATTCTTTG-TTAGCTTTGTA-CC  1039

seq1  CATTTTTAAAGATAAGGTTATTTGTTTCTCTGGAGTCTAACTTCTTGAGT  1100
      ||||||   |||||  ||||||||||||||||||||||||||   |||| 
seq2  CATTTT---AGATA--GTTATTTGTTTCTCTGGAGTCTAACT--CTGAG-  1081

seq1  TCTTTGTATATATTGGATATTACCCCTCTATCGTATTTAGGATTGGTAAA  1150
      ||||  ||   | ||||||||| |||||||||| | |||||| |||| ||
seq2  TCTTGATA---AATGGATATTA-CCCTCTATCG-AATTAGGA-TGGT-AA  1124

seq1  GATCTTTCCCCAATGTATTGGTTGCCTTTTCGTTCTATTGACAGTATCCT  1200
      ||||||  ||||||| ||| | |||  ||||||        || |    |
seq2  GATCTT--CCCAATG-ATT-GATGC--TTTCGT--------CAATGCGGT  1160

seq1  TTGCCTTACAGAAGCTTTGCAATTTTATAAGGTCCCTTTTGT  1242
       || | ||| |||||||||||| ||||||||||||  |||||
seq2  CTGGC-TAC-GAAGCTTTGCAA-TTTATAAGGTCC--TTTGT  1197


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