BAC Information

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BAC

Clone NameB6Ng01-168K19
Chromosome3 (Build37)
Map Location 41,058,972 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168K19.bB6Ng01-168K19.g
ACCDH959853DH959854
length1,0021,210
definitionDH959853|Mus musculus domesticus DNA, BAC clone: B6Ng01-168K19, 5' end.DH959854|Mus musculus domesticus DNA, BAC clone: B6Ng01-168K19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgata
ttctggagtccacattcttgagttctttatatatattggatattagtccc
ctatatgatatagaataggtaaagatcctttcccaatctgttggtggcct
ttttgacttattgacagtgtcttttgcattacagaagctttgcaatttta
tgaggtcccatttgtcaattctcgatcttacagcacaagccactgctgtt
ctattcaggaatttttcccctgtgcccatatcttcgaggcttttcccctc
ttctcctctataagtttcattgtctctggttttatgtggagttccttgat
ccacttagatttgaccttagtacaaggagataggaatggatcaattcaca
ttcttctacatgataatcgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttacactggatggttttagctcccttgtcaaggatcaagtt
tccatagctgtgtgggttcatttctgggtcttcaattctgttccattgat
ctacctgtctgtcactgtaccagtaccatgcagtttttatcacaattgtt
ctgtagtacagctttaggtcaggctggtgagtccaccagagattctttta
tcattgagaagagtttttgctatcttaggtttttttgttattccagatga
atttgcaatttgccctttctaacttggtgaaaaactgagttggaattttg
atggggattgcattgaaaaatttaaaatatactaactgataagataattt
ctgtcctagaaacactaataatgttttataagtaaactgattgttacatt
acgtacacagatatataatatattttaaataatcatctattaaaacagat
ggaatcatataaggctttagaaaatatttcttaatgattcatttaatatt
ttacgctcttttactattctctctctctctctttctgttgtttgtttgtt
tg
gaattccttttctgtctatttggtgttctgtaggcttcttgtatgttcac
agacatctccttctttaggttatggaagttttcttctatagttttgttga
agatatttactctccctctaagttgggaatctttgctctcttctattcct
attatccttaggtttggactttgcattgtgtcctggattttcttgatatt
ttgggtgaggagctttttgcattttgcatttcctttgattgtgtgtgttt
tctatggtatcttctgcacctgagattctcacttctatctcttgtattct
gttggtgatgcttgcatctatggctcccgatatctttccaagattttcta
tccccagaattgtctctctttgtgatttctttattgtttctacttccatt
tttagatcctgaatggttttgttcaattccttcacctgtttggttgtgtt
ttcctgcaattctttaagggatttttgtgtttcctctttaagggtttcta
cctgttaatttctgttttcctgtatttctttaagggagttatatgtcctt
cttaaaatcctaggtcaggggggctagagaggtggctcagtggttaaggg
cactgactgctcttctgaaggtcctgagttcaaatcccagcacatggtgg
ctcacaatcacccgtaatgagatctgatactcctttgtggtgagtcagag
acagctacagtgtgtttatatgtaataaataaataaataatttttaaaat
cctatgtcagcatcatgagatatgattttaaatcatcatcttgcttttcc
tgtgtgttgggatatccagggcttgctgtggctggagaactgggttttga
tgataccaggataccctggtttctgttgctaagattcttgcatttgcctt
tcaccacctagtttatctctggtgctagatggcttgctgtctctggctga
gctgtccctcctgtagtctataagctgtgtcagcactctgggaaaccact
cttctcttggcaaggacccacgcccagcaagcttgtgaacagcctcagct
ctacaggcttagttttgaaatgtcttcattatacgtctccaggtagccta
tcgatgagatctggagattccacgcaccatctttgagcctccgggattga
ccctctctcaggactcaatgcactcttagtgactcgtctctcgtgagcac
tcgttctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41058972_41059737
seq2: B6Ng01-168K19.b_42_807 (reverse)

seq1  TTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTTGA  50
      |||||||||||||||||||||||||||||||| || |||| | | || ||
seq2  TTCAATGCAATCCCCATCAAAATTCCAACTCAGTTTTTCACCAAGTTAGA  50

seq1  AAGAGCAATCTGCAAATTCATCTGGAATAAC-AAAAAACCTAGGATAGCA  99
      ||| ||||  ||||||||||||||||||||| |||||||||| |||||||
seq2  AAGGGCAAATTGCAAATTCATCTGGAATAACAAAAAAACCTAAGATAGCA  100

seq1  AAAACTCTTCTCAAGGATAACAGAACCTCTGGTGGAATCACCATGCCTGA  149
      |||||||||||||| ||||| |||| |||||||||| |||||| ||||||
seq2  AAAACTCTTCTCAATGATAAAAGAATCTCTGGTGGACTCACCA-GCCTGA  149

seq1  CCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGT  199
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  CCTAAAGCTGTACTACAGAACAATTGTGATAAAAACTGCATGGTACTGGT  199

seq1  ATAGTGACAGACAAGCAGACCAATGGAATAGAATTGAAGACTCAGAAACG  249
      | ||||||||||| | ||| |||||||| |||||||||||| |||||| |
seq2  ACAGTGACAGACAGGTAGATCAATGGAACAGAATTGAAGACCCAGAAATG  249

seq1  AATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAT  299
      || ||||||| ||||||  |||||||| | ||||||||||||||||||||
seq2  AACCCACACAGCTATGGAAACTTGATCCTTGACAAGGGAGCTAAAACCAT  299

seq1  CCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGT  349
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  CCAGTGTAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGC  349

seq1  TGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACT  399
        |||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  GATTATCATGTAGAAGAATGTGAATTGATCCATTCCTATCTCCTTGTACT  399

seq1  AAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACT  449
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  AAGGTCAAATCTAAGTGGATCAAGGAACTCCACATAAAACCAGAGACAAT  449

seq1  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAG  499
      |||||||||||||||| ||| |||||||||||| |||||||||| |||||
seq2  GAAACTTATAGAGGAG-AAGAGGGGAAAAGCCTCGAAGATATGGGCACAG  498

seq1  GGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGA  549
      |||||||||||||| ||||||||||| |||||||||||||||||| ||||
seq2  GGGAAAAATTCCTGAATAGAACAGCAGTGGCTTGTGCTGTAAGATCGAGA  548

seq1  ATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGA  599
      || ||||||||||||||||| ||| ||||||||||||| || ||||||||
seq2  ATTGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAATGCAAAAGA  598

seq1  CACCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTA  648
      ||| ||||||||| |||||||| |||||||||||||||||||||||||||
seq2  CACTGTCAATAAGTCAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTA  648

seq1  CCTATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTC  698
      ||||| ||| |||| |||||||||||||||||||||||||| ||||||||
seq2  CCTATTCTATATCATATAGGGGACTAATATCCAATATATATAAAGAACTC  698

seq1  AAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTC  748
      ||||| ||||| ||||||| ||||||||||||||||||||||||||||||
seq2  AAGAATGTGGACTCCAGAATATCAAATAACCCCATTAAAAAATGGGGCTC  748

seq1  AGAGCTAAACAAAGAATT  766
      ||||||||||||||||||
seq2  AGAGCTAAACAAAGAATT  766