BAC Information

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BAC

Clone NameB6Ng01-169J22
Chromosome3 (Build37)14 (Build37)
Map Location 41,059,641 - 41,059,73784,324,868 - 84,325,014
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169J22.bB6Ng01-169J22.g
ACCDH960548DH960549
length1,017147
definitionDH960548|Mus musculus domesticus DNA, BAC clone: B6Ng01-169J22, 5' end.DH960549|Mus musculus domesticus DNA, BAC clone: B6Ng01-169J22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,641 - 41,059,737)(84,324,868 - 84,325,014)
sequence
gaattctttgtttagatctgtaccccattttttaatggggttatttaatt
ttctggagtccagcttcttgagttctttatatatattggatattagtctc
tagtttctagtgctctctctagtttctttttggtggcactcagaactatg
agttttcctcttagatctgctttcattgtgtcccataaatttgggtatgt
tgtgtctttgttttcattaaactctaaaaagtctttaatctctttcttta
tttcttccttgactaagttatcactgagtagtgtgttgttcagcttccac
atgaatgttggttttctattatttctgttgttattgtagagcagccttag
tccattaggatgcatgggataatttcaatatttttgtatctgttgaaggc
tgttttgtgaccagttatatggtcaggtttggagaaggaaccttgaggta
ctgagaagaaagtatatccttttgttttaggataaaatgttctgtagcta
tctgttagatccatttgtttcataacttctgttagtttcaatgtgtctct
gcttaatttctgtttccaggatctgttcattgatgagagttgggtgttga
agtctcccactattattgtttgaggtgcaatatgtgctttgagcttgagt
atagattccttaatgaatgtggattcccttgcatctgtagcatagatatt
cagaattgagagttcatcttggcagattttacctttgatgagtttgaagt
gcccctccttgtcttttttgataactttgttggaagtcgattttattcga
tattagaatggctactccagcttgtttctttggattgcttgctcattgct
tctgaggcccacgtgttctcctgagaggactgatctctgtgggacctgga
tccaagatggtgctctcacctgagtcccgtggcagagccctctctggaga
ccaactctcctcagtgatcctatgatcctgcatgtgctaggtgcctgcag
catggagagtcctctgg
tcagtactgtttcattagaatttgtttttgtttggtgcttttaaaattat
atttgtattcacatgtagtgtttggtgtgtgtatgtatatatatgtgtgt
gtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059641_41059737
seq2: B6Ng01-169J22.b_43_139 (reverse)

seq1  GACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAA  50
      |||||||||||||||||||| |||||||||||||| |||| |||||||||
seq2  GACTAATATCCAATATATATAAAGAACTCAAGAAGCTGGACTCCAGAAAA  50

seq1  TCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  97
      | ||||||||||||||||||||||||  |||| ||||||||||||||
seq2  TTAAATAACCCCATTAAAAAATGGGGTACAGATCTAAACAAAGAATT  97

seq1: chr14_84324868_84325014
seq2: B6Ng01-169J22.g_73_219

seq1  TCAGTACTGTTTCATTAGAATTTGTTTTTGTTTGGTGCTTTTAAAATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACTGTTTCATTAGAATTTGTTTTTGTTTGGTGCTTTTAAAATTAT  50

seq1  ATTTGTATTCACATGTAGTGTTTGGTGTGTGTATGTATATATATGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTCACATGTAGTGTTTGGTGTGTGTATGTATATATATGTGTGT  100

seq1  GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  147