BAC Information

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BAC

Clone NameB6Ng01-170E24
Chromosome3 (Build37)
Map Location 122,691,727 - 122,834,567
singlet/doubletdoublet
Overlap geneMyoz2, Synpo2
Upstream geneArhgap29, Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726, Bcar3, Fnbp1l, Ppia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53
Downstream geneSec24d, G430022H21Rik, Prss12, EG668804, Ndst3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170E24.bB6Ng01-170E24.g
ACCDH961057DH961058
length1,161928
definitionDH961057|Mus musculus domesticus DNA, BAC clone: B6Ng01-170E24, 5' end.DH961058|Mus musculus domesticus DNA, BAC clone: B6Ng01-170E24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,691,727 - 122,692,894)(122,833,637 - 122,834,567)
sequence
gaattctagtgtagcataaagaatagtggtcagagataagcaaaggctgg
aaagaccctgcaaggacagcatatatgtataagaacaaacaataacacag
gagtatgcactacctgggtcccttgaacttggaaaaccaaaaatgagtta
gacatttaagtgatcagtaataggaaacatttttctgtctttatctcaaa
tgtgtcactcccaagtgggtcttcctctgaagagccttgggcatcattta
ctctgtttacctagatttcctgatggtggccttattggcatgtccctggt
aaactcagtgtgctccatgtggctggttcataatatactcatattgtcag
cctctggggaaaaaaaaaatgtgccacccaaaaataaaactgcacttttg
cagtgagtctgattgcagtttagagaagtatttcttctgttgtttcccac
cactgattcttaatcagagcagctcatcgagggctgttttagaatggctt
gtacctacgcttcgcccgccagtgtcagtttgtatttagaataattaatt
tgacttgattttttgttttgttctgttttgttttgttttgttttgttttg
ttttcaagacaggatttctctgtatagccctggctgtcctggaactcact
ttgtagaccagactggcctctgactcagaaatcagcctgcctctgcctct
gcctcctgagtgctgggattaaaggcgtgtgccaccacgcccggctcttg
acttgatttttaatggatttatatgaaactaagaacctatgaacccttag
gttcttcatagagcatgaatgtttatgtagccttgcacacaagatcctat
taggttttcaacctattaggtattccataactgacaaaaaggattcactg
gtctatttcattttaggatggtttgctgtttgttttgagactattttgtg
tagcttactgtcctacaagctctatagctgctgatgaagtagaactccta
cagcctcacctcatcccagggccggcttcttcctaaagttattgcctaga
aacgtccttactttcagcagtgtcaggagggaggcagagctgaattcctg
acgttccatctcgtgagttgtctggcattatctcccagggcggttttgga
caagatagaaa
gaattcattttggtttcattttgctgcactgaaatcttccttctcttcac
tcctgactctgggaactcccaaagccaaaaccttacatgtttcacagagt
cctggccctgccgctatgtttctaaagatggcccatgccagtcagctagt
gtgaccttcagcagcctgcatgaggaagccagaaatttaaagggaacttc
tgtaggacagaaaagggttttttcccccagttgacaaggaacatggtgat
tctcccagttgatgaggtagaccgtgggctggccgttctgctcacttgcc
cacagaagctcatgaaagggttagaaagggtatacagcagggggagatgt
tcctatctgtctgagactggaggaggggggtaggtacagggtttccccag
gctgtggctagggtggagagagactgctcagattaccacctgttgctaaa
aggaggctgtagatctcaaaggatggagctcagaagaaccatgaaggcgg
agaagataaatcatctgcactaggaaaggtggcccttggcctcgaaactc
acagaagatagtcagtagccaagggaggaatagaaacaacgtccaactat
accaaaagaccttagcctgagcttccagatcagccccctgcaccctgcaa
aggcagctgtgggtcagagggtggagctcaaccagaagctgccagtgggg
aaggcctctgccctcacgcagcatctgcgagcaaggaacgctgagttagg
ggagaatgtttgagatgcatagaaacggacgtcttgtttcagatgaaatt
ggaccacttatagcctggaaatgaggctaactaggctctgaagtgaccga
gggaggcaaattggttctgctcacatcttttgactatgacaaaggtatga
gaggaaaaaaaatatataaatcacacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_122691727_122692894
seq2: B6Ng01-170E24.b_48_1208

seq1  GAATTCTAGTGTAGCATAAAGAATAGTGGTCAGAGATAAGCAAAGGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTGTAGCATAAAGAATAGTGGTCAGAGATAAGCAAAGGCTGG  50

seq1  AAAGACCCTGCAAGGACAGCATATATGTATAAGAACAAACAATAACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCCTGCAAGGACAGCATATATGTATAAGAACAAACAATAACACAG  100

seq1  GAGTATGCACTACCTGGGTCCCTTGAACTTGGAAAACCAAAAATGAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGCACTACCTGGGTCCCTTGAACTTGGAAAACCAAAAATGAGTTA  150

seq1  GACATTTAAGTGATCAGTAATAGGAAACATTTTTCTGTCTTTATCTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTAAGTGATCAGTAATAGGAAACATTTTTCTGTCTTTATCTCAAA  200

seq1  TGTGTCACTCCCAAGTGGGTCTTCCTCTGAAGAGCCTTGGGCATCATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCACTCCCAAGTGGGTCTTCCTCTGAAGAGCCTTGGGCATCATTTA  250

seq1  CTCTGTTTACCTAGATTTCCTGATGGTGGCCTTATTGGCATGTCCCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTACCTAGATTTCCTGATGGTGGCCTTATTGGCATGTCCCTGGT  300

seq1  AAACTCAGTGTGCTCCATGTGGCTGGTTCATAATATACTCATATTGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGTGTGCTCCATGTGGCTGGTTCATAATATACTCATATTGTCAG  350

seq1  CCTCTGGGGAAAAAAAAAATGTGCCACCCAAAAATAAAACTGCACTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGGAAAAAAAAAATGTGCCACCCAAAAATAAAACTGCACTTTTG  400

seq1  CAGTGAGTCTGATTGCAGTTTAGAGAAGTATTTCTTCTGTTGTTTCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTCTGATTGCAGTTTAGAGAAGTATTTCTTCTGTTGTTTCCCAC  450

seq1  CACTGATTCTTAATCAGAGCAGCTCATCGAGGGCTGTTTTAGAATGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATTCTTAATCAGAGCAGCTCATCGAGGGCTGTTTTAGAATGGCTT  500

seq1  GTACCTACGCTTCGCCCGCCAGTGTCAGTTTGTATTTAGAATAATTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTACGCTTCGCCCGCCAGTGTCAGTTTGTATTTAGAATAATTAATT  550

seq1  TGACTTGATTTTTTGTTTTGTTCTGTTTTGTTTTGTTTTGTTTTGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGATTTTTTGTTTTGTTCTGTTTTGTTTTGTTTTGTTTTGTTTTG  600

seq1  TTTTCAAGACAGGATTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGACAGGATTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACT  650

seq1  TTGTAGACCAGACTGGCCTCTGACTCAGAAATCAGCCTGCCTCTGCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGACCAGACTGGCCTCTGACTCAGAAATCAGCCTGCCTCTGCCTCT  700

seq1  GCCTCCTGAGTGCTGGGATTAAAGGCGTGTGCCACCACGCCCGGCTCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTGAGTGCTGGGATTAAAGGCGTGTGCCACCACGCCCGGCTCTTG  750

seq1  ACTTGATTTTTAATGGATTTATATGAAACTAAGAACCTATGAACCCTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATTTTTAATGGATTTATATGAAACTAAGAACCTATGAACCCTTAG  800

seq1  GTTCTTCATAGAGCATGAATGTTTATGTAGCCTTGCACACAAGATCCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCATAGAGCATGAATGTTTATGTAGCCTTGCACACAAGATCCTAT  850

seq1  TAGGTTTTCAACCTATTAGGTATTCCATAACTGACAAAAAGGATTCACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTCAACCTATTAGGTATTCCATAACTGACAAAAAGGATTCACTG  900

seq1  GTCTATTTCATTTTAGGATGGTTTGCTGTTTGTTTTGAGACTATTTTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTTCATTTTAGGATGGTTTGCTGTTTGTTTTGAGACTATTTTGTG  950

seq1  TAGCTTACTGTCCTACAAGCTCTATAGCTGCTGATGGAGTTAGACTCCCA  1000
      |||||||||||||||||||||||||||||||||||| |||   ||||| |
seq2  TAGCTTACTGTCCTACAAGCTCTATAGCTGCTGATGAAGTAGAACTCCTA  1000

seq1  CAGCCTCCACCTCATCCCATGGCCGGCTTCTTCCTAAATGTTTATTGCCT  1050
      |||||| |||||||||||| ||||||||||||||||||   |||||||||
seq2  CAGCCT-CACCTCATCCCAGGGCCGGCTTCTTCCTAAA--GTTATTGCCT  1047

seq1  AGATACCGTCTTTATCTTCAGCAGTGTCAGGGAGGAAGGCAGAGGCTGGA  1100
      ||| | |||| |||  ||||||||||||| ||||| ||||||| |||| |
seq2  AGA-AACGTCCTTACTTTCAGCAGTGTCA-GGAGGGAGGCAGA-GCTGAA  1094

seq1  TTCCTGACGTTCCACTCCGTGAGTTGTCT-GCATTAACTCCCAAGGGCAG  1149
      ||||||||||||||   |||||||||||| |||||| ||||| ||||| |
seq2  TTCCTGACGTTCCATCTCGTGAGTTGTCTGGCATTATCTCCC-AGGGCGG  1143

seq1  TTTTGAAACAAGTTAGAAA  1168
      |||||  ||||| ||||||
seq2  TTTTG-GACAAGATAGAAA  1161

seq1: chr3_122833637_122834567
seq2: B6Ng01-170E24.g_67_994 (reverse)

seq1  TGGTGTGATTTAAATATTTTTTTTCCTCTCACTACCTTCTGTCATAGTCA  50
      |||||||||||| |||||||||||||||||| |||||| |||||||||||
seq2  TGGTGTGATTTATATATTTTTTTTCCTCTCA-TACCTT-TGTCATAGTCA  48

seq1  AAAGATGTTGAGCAGAACCCATTTTGCCTTCCTCGGTCACTTCAGAGCCT  100
      ||||||| ||||||||| ||| ||||||| ||||||||||||||||||||
seq2  AAAGATG-TGAGCAGAA-CCAATTTGCCTCCCTCGGTCACTTCAGAGCCT  96

seq1  AGTTAGCCTCATTTCCAGGTATTAAGTGGTCCAATTTCATCTGAAACAAG  150
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  AGTTAGCCTCATTTCCAGGCTATAAGTGGTCCAATTTCATCTGAAACAAG  146

seq1  ACGTCCGTTTCTTATGCATCTCAAACATTCT-CCCTAACTCAGCGTTCCT  199
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  ACGTCCGTTTC-TATGCATCTCAAACATTCTCCCCTAACTCAGCGTTCCT  195

seq1  TGCTCGCAGATGCTGCGTGA-GGCAGAGGCCTTCCCCACTGGCAGCTTCT  248
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCTCGCAGATGCTGCGTGAGGGCAGAGGCCTTCCCCACTGGCAGCTTCT  245

seq1  GGTTGAGCTCCACCCTCTGACCCACAGCTGCCTTTGCAGGGTGCAGGGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGCTCCACCCTCTGACCCACAGCTGCCTTTGCAGGGTGCAGGGGG  295

seq1  CTGATCTGGAAGCTCAGGCTAAGGTCTTTTGGTATAGTTGGACGTTGTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTGGAAGCTCAGGCTAAGGTCTTTTGGTATAGTTGGACGTTGTTT  345

seq1  CTATTCCTCCCTTGGCTACTGACTATCTTCTGTGAGTTTCGAGGCCAAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCTCCCTTGGCTACTGACTATCTTCTGTGAGTTTCGAGGCCAAGG  395

seq1  GCCACCTTTCCTAGTGCAGATGATTTATCTTCTCCGCCTTCATGGTTCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTTTCCTAGTGCAGATGATTTATCTTCTCCGCCTTCATGGTTCTT  445

seq1  CTGAGCTCCATCCTTTGAGATCTACAGCCTCCTTTTAGCAACAGGTGGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTCCATCCTTTGAGATCTACAGCCTCCTTTTAGCAACAGGTGGTA  495

seq1  ATCTGAGCAGTCTCTCTCCACCCTAGCCACAGCCTGGGGAAACCCTGTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGCAGTCTCTCTCCACCCTAGCCACAGCCTGGGGAAACCCTGTAC  545

seq1  CTACCCCCCTCCTCCAGTCTCAGACAGATAGGAACATCTCCCCCTGCTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCCCTCCTCCAGTCTCAGACAGATAGGAACATCTCCCCCTGCTGT  595

seq1  ATACCCTTTCTAACCCTTTCATGAGCTTCTGTGGGCAAGTGAGCAGAACG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTTTCTAACCCTTTCATGAGCTTCTGTGGGCAAGTGAGCAGAACG  645

seq1  GCCAGCCCACGGTCTACCTCATCAACTGGGAGAATCACCATGTTCCTTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCCACGGTCTACCTCATCAACTGGGAGAATCACCATGTTCCTTGT  695

seq1  CAACTGGGGGAAAAAACCCTTTTCTGTCCTACAGAAGTTCCCTTTAAATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGGGGAAAAAACCCTTTTCTGTCCTACAGAAGTTCCCTTTAAATT  745

seq1  TCTGGCTTCCTCATGCAGGCTGCTGAAGGTCACACTAGCTGACTGGCATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTTCCTCATGCAGGCTGCTGAAGGTCACACTAGCTGACTGGCATG  795

seq1  GGCCATCTTTAGAAACATAGCGGCAGGGCCAGGACTCTGTGAAACATGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCTTTAGAAACATAGCGGCAGGGCCAGGACTCTGTGAAACATGTA  845

seq1  AGGTTTTGGCTTTGGGAGTTCCCAGAGTCAGGAGTGAAGAGAAGGAAGAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGGCTTTGGGAGTTCCCAGAGTCAGGAGTGAAGAGAAGGAAGAT  895

seq1  TTCAGTGCAGCAAAATGAAACCAAAATGAATTC  931
      |||||||||||||||||||||||||||||||||
seq2  TTCAGTGCAGCAAAATGAAACCAAAATGAATTC  928