BAC Information

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BAC

Clone NameB6Ng01-170K18
Chromosome3 (Build37)
Map Location 114,998,378 - 115,182,135
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043220, Olfm3
Downstream geneEG546808, Edg1, Dph5, LOC626061, Slc30a7, Extl2, Vcam1, Gpr88, Cdc14a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170K18.bB6Ng01-170K18.g
ACCDH961325DH961326
length351120
definitionDH961325|Mus musculus domesticus DNA, BAC clone: B6Ng01-170K18, 5' end.DH961326|Mus musculus domesticus DNA, BAC clone: B6Ng01-170K18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,181,785 - 115,182,135)(114,998,378 - 114,998,497)
sequence
ttgtagattttttttccttacaggtcctttgtttaagccctgggaaataa
aatcattggcagcatcataatatgataaatcatgaagtagaatgttagaa
tttagaaaccctgatgaacctaataaatctaatagtctttttttcctttg
agttactgacaaaatctatcagtagattatagctttgaatgtttgctcca
ttgtggactgttcagacttgtgccctataactatagatagaactgtagac
agaagacagaaatagcttttttttttttaatgtatgttggaactttcttg
tgtttggcaaagagagagcctagtcctttaggaggatggggggaggggag
g
tagaagagatcagatgcaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtaaaaacgaggatgtgagtgtgtgttaat
atggtcaatatgcatgaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_115181785_115182135
seq2: B6Ng01-170K18.b_51_401 (reverse)

seq1  CCTCCCCTCCCCCCATCCTCCTAAAGGACTAGGCTCTCTCTTTGCCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTCCCCCCATCCTCCTAAAGGACTAGGCTCTCTCTTTGCCAAAC  50

seq1  ACAAGAAAGTTCCAACATACATTAAAAAAAAAAAAGCTATTTCTGTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAGTTCCAACATACATTAAAAAAAAAAAAGCTATTTCTGTCTTC  100

seq1  TGTCTACAGTTCTATCTATAGTTATAGGGCACAAGTCTGAACAGTCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACAGTTCTATCTATAGTTATAGGGCACAAGTCTGAACAGTCCACA  150

seq1  ATGGAGCAAACATTCAAAGCTATAATCTACTGATAGATTTTGTCAGTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCAAACATTCAAAGCTATAATCTACTGATAGATTTTGTCAGTAAC  200

seq1  TCAAAGGAAAAAAAGACTATTAGATTTATTAGGTTCATCAGGGTTTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAAAAAAAGACTATTAGATTTATTAGGTTCATCAGGGTTTCTAA  250

seq1  ATTCTAACATTCTACTTCATGATTTATCATATTATGATGCTGCCAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAACATTCTACTTCATGATTTATCATATTATGATGCTGCCAATGAT  300

seq1  TTTATTTCCCAGGGCTTAAACAAAGGACCTGTAAGGAAAAAAAATCTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCCCAGGGCTTAAACAAAGGACCTGTAAGGAAAAAAAATCTACA  350

seq1  A  351
      |
seq2  A  351

seq1: chr3_114998378_114998497
seq2: B6Ng01-170K18.g_71_190

seq1  TAGAAGAGATCAGATGCAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAGATCAGATGCAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50

seq1  GTGTGTGTGTGTGTGTGTGTGTAAGAGCGAGGATGTGAGTGTGTGTTAAC  100
      |||||||||||||||||||||||| | |||||||||||||||||||||| 
seq2  GTGTGTGTGTGTGTGTGTGTGTAAAAACGAGGATGTGAGTGTGTGTTAAT  100

seq1  AAGGTCAATATGCATCAAAT  120
      | ||||||||||||| ||||
seq2  ATGGTCAATATGCATGAAAT  120