BAC Information

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BAC

Clone NameB6Ng01-171D08
Chromosome3 (Build37)
Map Location 70,608,069 - 70,609,191
singlet/doubletsinglet
Overlap geneEG625901
Upstream geneLOC100041334, 1110032A04Rik, Gm414, LOC100041384, LOC625868, LOC670542
Downstream geneEG667377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171D08.bB6Ng01-171D08.g
ACCGA000153GA000154
length1,1211,136
definitionB6Ng01-171D08.b B6Ng01-171D08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacactgctccatgtccataaccagggacctccatctccagcga
ctggagaggagaggactgcaataaagaaatggataggagagctgcacctg
tcagagtcatggacacaaacatactcaggcaagtattaagtgtaaccgct
ggaaatacagctaggtgagaagagagcaaccaccaccccaaggcgaatac
aagctagagtcatccagcattcccactgagaacttcagacatggaaatat
tgtgcggagacatgataacccatcatcccatggagaacaatgtggtatgg
tggggaaagaggcaaagtactagaagtggcaacccaaataaggactgtaa
atctgctacagaaagttgccattttttgtagggaattaagttattttgaa
ctacatgtcttcttgtagagtgatctgtagaatataatgtgtgaagagaa
atattttcattgcggcaaaccagaagtactcttccattgatggtatcaat
tttctattctatttatcttgtacttgaatttttctttgtttctaggtttg
tatttcaatgctttgttttgttttagctttgccttgctgaaataggcttt
actagattcttttttctgcacctacttcaagctgtaccctctgctacttc
caatgcctctgtggtcattaaataatcaattaattgattaatagcctctg
caactgcaagcaattgtatgtaccacaggtatgcaggagcaggctggggt
cagaagacagtgtcagacttcctggagctggagttatgattcctgtgaga
caccctatttgtgctgagaactgacattgggtcctctgctagagcatgaa
gtattcctagctacagagtcatctctcccacctcattagcttaaagaaac
agctttaaaggcatctagtctaactaacacagtttcctctaattccaaac
caacccttgagtttaagtgaaatacaaaacatgcattttactgcattttg
atagcagattgttcacatcaggttctcttaatgttcccgaatcctgttct
ctaaaatttagtggtaattataagccaagttaccagttacatctaagaga
gccacataggtaagcagcagt
gaattccacccaaccaggggctgggatttttcctggtctgtgacagcccc
tcaccatcttcagcatgaactcagcagagggtcccaaggtccccagagga
ctctccacgccacaggcaccctagcacacccaggatcttgggatcactga
gaccagtctacccaggagagcacacgggctgcagaagcaacagagcttct
tagacagggtgcctttgggccttcatcctcagccaggaggtggagctgag
atccagacccctgtgtaccttccttgccagaggagagtcagcctccaggg
agggatctgaccccagggctcaggaggtagatctgagctctggacttctg
ggcaccttcactgcaagaggagagcttgcttgcagagagtgctctgacca
ctgggactcgggagggagttagactcccaggaggctaacagaatcacagg
aggaacaagctcctgccagagacagctagaacaactaacagagattatca
gatggtaaacataagaatcttactaacagaaaccaagacgactgggcatc
atcagagcccagtacgcccaccacagcaaatcctggatacaacaacacac
ccgaaaagcaagactcagatttaaaaccatatctcataaagctagtagag
gattttaaaaagggcattaatagctcacttaaagaaatacaggagaacat
ggttaacaggtagaagtccttaaagaactacaggaaaacactactaaaca
ggtagaagttgttaaagaggaaacacaaaaatcccttaaagaattatagg
aaaacacaaccaaacaggtgatggaatttaacaaaaccatccaagatcta
aaatagaagtagaaacaataaagaaaatccaaagagagacaattctggat
atagaaaaccttaagaaagaaattaggaaccatagatgcgagcatcagca
cagaatacagagatagaagagatctcagtgcagaagatcatagaaaacat
gacccaccaatcaagaaattgccaattcaaaataggacgaacttaaccct
agaaaggcagaaaaacctctactcgaacttcggaaatccagaccatgaag
acaacctaggtaatggtgcaattgaagtgagactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_70608069_70609191
seq2: B6Ng01-171D08.b_36_1156

seq1  GAATTCAACACTGCTCCATGTCCATAACCAGGGACCTCCATCTCCAGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACTGCTCCATGTCCATAACCAGGGACCTCCATCTCCAGCGA  50

seq1  CTGGAGAGGAGAGGACTGCAATAAAGAAATGGATAGGAGAGCTGCACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAGGAGAGGACTGCAATAAAGAAATGGATAGGAGAGCTGCACCTG  100

seq1  TCAGAGTCATGGACACAAACATACTCAGGCAAGTATTAAGTGTAACCGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTCATGGACACAAACATACTCAGGCAAGTATTAAGTGTAACCGCT  150

seq1  GGAAATACAGCTAGGTGAGAAGAGAGCAACCACCACCCCAAGGCGAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATACAGCTAGGTGAGAAGAGAGCAACCACCACCCCAAGGCGAATAC  200

seq1  AAGCTAGAGTCATCCAGCATTCCCACTGAGAACTTCAGACATGGAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGAGTCATCCAGCATTCCCACTGAGAACTTCAGACATGGAAATAT  250

seq1  TGTGCGGAGACATGATAACCCATCATCCCATGGAGAACAATGTGGTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGGAGACATGATAACCCATCATCCCATGGAGAACAATGTGGTATGG  300

seq1  TGGGGAAAGAGGCAAAGTACTAGAAGTGGCAACCCAAATAAGGACTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAAGAGGCAAAGTACTAGAAGTGGCAACCCAAATAAGGACTGTAA  350

seq1  ATCTGCTACAGAAAGTTGCCATTTTTTGTAGGGAATTAAGTTATTTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTACAGAAAGTTGCCATTTTTTGTAGGGAATTAAGTTATTTTGAA  400

seq1  CTACATGTCTTCTTGTAGAGTGATCTGTAGAATATAATGTGTGAAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGTCTTCTTGTAGAGTGATCTGTAGAATATAATGTGTGAAGAGAA  450

seq1  ATATTTTCATTGCGGCAAACCAGAAGTACTCTTCCATTGATGGTATCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCATTGCGGCAAACCAGAAGTACTCTTCCATTGATGGTATCAAT  500

seq1  TTTCTATTCTATTTATCTTGTACTTGAATTTTTCTTTGTTTCTAGGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTCTATTTATCTTGTACTTGAATTTTTCTTTGTTTCTAGGTTTG  550

seq1  TATTTCAATGCTTTGTTTTGTTTTAGCTTTGCCTTGCTGAAATAGGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAATGCTTTGTTTTGTTTTAGCTTTGCCTTGCTGAAATAGGCTTT  600

seq1  ACTAGATTCTTTTTTCTGCACCTACTTCAAGCTGTACCCTCTGCTACTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATTCTTTTTTCTGCACCTACTTCAAGCTGTACCCTCTGCTACTTC  650

seq1  CAATGCCTCTGTGGTCATTAAATAATCAATTAATTGATTAATAGCCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCTCTGTGGTCATTAAATAATCAATTAATTGATTAATAGCCTCTG  700

seq1  CAACTGCAAGCAATTGTATGTACCACAGGTATGCAGGAGCAGGCTGGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCAAGCAATTGTATGTACCACAGGTATGCAGGAGCAGGCTGGGGT  750

seq1  CAGAAGACAGTGTCAGACTTCCTGGAGCTGGAGTTATGATTCCTGTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACAGTGTCAGACTTCCTGGAGCTGGAGTTATGATTCCTGTGAGA  800

seq1  CACCCTATTTGTGCTGAGAACTGACATTGGGTCCTCTGCTAGAGCATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTATTTGTGCTGAGAACTGACATTGGGTCCTCTGCTAGAGCATGAA  850

seq1  GTATTCCTAGCTACAGAGTCATCTCTCCCACCTCATTAGCTTAAAG-AAC  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTATTCCTAGCTACAGAGTCATCTCTCCCACCTCATTAGCTTAAAGAAAC  900

seq1  AGCTTTAAAGGCATCTAGTCTAACTAACACAG-TTCCTCTAATTCCAAAC  948
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGCTTTAAAGGCATCTAGTCTAACTAACACAGTTTCCTCTAATTCCAAAC  950

seq1  CAA-CCTTGAGTTTAAGTGAAATAC-AAACATGCATTTTACTGCATTTTG  996
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAACCCTTGAGTTTAAGTGAAATACAAAACATGCATTTTACTGCATTTTG  1000

seq1  ATAGCAGGATTG-TCACATCAGTTTTCTCTTATTGTTCCCCGATCCCTGT  1045
      |||||| ||||| |||||||||  |||||||| |||||||  ||||   |
seq2  ATAGCA-GATTGTTCACATCAG-GTTCTCTTAATGTTCCCGAATCCTGTT  1048

seq1  CTCTAAATATTAGTGGTAATCATAAGCCCAAGTAACAGTTACAAACAAAG  1095
      |||||||  ||||||||||| ||||||| |  || ||||||| | | |||
seq2  CTCTAAAATTTAGTGGTAATTATAAGCCAAGTTACCAGTTAC-ATCTAAG  1097

seq1  AAGAGCCACATAAGGTAAGGCAAGCAGT  1123
       |||||||||| |||||||   ||||||
seq2  -AGAGCCACAT-AGGTAAG--CAGCAGT  1121