BAC Information

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BAC

Clone NameB6Ng01-171L19
Chromosome3 (Build37)
Map Location 134,864,171 - 134,864,593
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039199, Cxxc4, Ppia-ps3_1390.1, LOC100039234, Tacr3, LOC229837, LOC100039290
Downstream geneEG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2, Ube2d3, Manba, LOC668745, Nfkb1, ENSMUSG00000045520, Slc39a8, LOC100039350, LOC383923, Bank1, LOC100039477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171L19.bB6Ng01-171L19.g
ACCGA000537GA000538
length1,142418
definitionB6Ng01-171L19.b B6Ng01-171L19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaatcaatctaagcaaaccag
tagccaacatcaaagtaaatggtgagaaactggaagcaatcccattaaaa
tcagggactagacaaggctgcccactttctccatacctattcaacatagt
acttgaagtcctagtcacagcaattcgacaacaaaaggagatcaaaggga
tacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatgtg
atagtatatataagtgaccctaaaaattccaccagagaacttctagacct
gataaacagctttcatgaactagctggatataaaattaactcaacaagtc
aatggcctttctctacacaaagtataaacaggctgagaaagaaattaggg
aaacaacacccttcacaatagtcacaaataatataaaataccttggtgtg
actctaactaatgaagtgaaagatctgtatgataagaacttcaagtctct
gaagaaagaaatcaaagaagatctcagaaggtgaaaagatctctcatgct
catgaattggcaggatcaatatagtaaaaatggctatcttgccaaaagca
atctacagattcaatgcaacccccatcaaaattccaattcaattcttcaa
tgaattagaaagggcaatttgaaaattcatctggaataacaaaaaaacct
aggatagcaaaaactcttctcaaggataaaagaacctccggtggaatcac
catgcctgacctaaagctgtactacagagcaattgtgataaaaacttcat
ggtactgctataacaacagacaagtagatcaatgcaatagaattgaagac
ccagaaatgaacccacacacctatggtcacttgaactttgacagggagct
aaaaccacccagtagaaaaagaaagcattttcaacagtggtgctggtaca
ctgcagttatcatgtagaagaatgtgatgatcatctatctctgtactagg
tcaaattagtgaatcagacttcacataaacagagaaactgacttatgagg
agagtggggacagcttagaatggccggaattctggatgacgcatggctgc
gtgatcgattgccatgacctatgtaactgcaagccttgccag
ttggagttcactgcctggttctttgttgttgctgtttgtttgtttacttt
ttttcagcttctactcagcaggttgataatttgggctttctcattgcttc
tgagctacctgactccttgtgagaaactattggggtgctatctaaaaccg
aaaggcgatccaaagaacctctgaaaacataactcactcctaagctccca
cggatcctttttctttatataagaaataaagattagtaacagtgctattt
aggtgtttatgaatctaatataaagtgagctaatctcactacaacattag
gagacttaaaagtgggttcccctgaggggtgggagtgtgtaggagatgag
gaagaagcttgaaggagaggtggctagtttctgttttaagattttaaact
ctacttgtatctgtactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_134864171_134864593
seq2: B6Ng01-171L19.g_64_487 (reverse)

seq1  GAGTACAGAT-CAAGTAGTGTTTAAAATCTTAAAACAGAAACTAGCCACC  49
      |||||||||| ||||||| |||||||||||||||||||||||||||||||
seq2  GAGTACAGATACAAGTAGAGTTTAAAATCTTAAAACAGAAACTAGCCACC  50

seq1  TCTCCTTCAAGCTTCTTCCTCATCTCCTACACACTCCCACCCCTCAGGGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCAAGCTTCTTCCTCATCTCCTACACACTCCCACCCCTCAGGGG  100

seq1  AACCCACTTTTAAGTCTCCTAATGTTGTAGTGAGATTAGCTCACTTTATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTTTTAAGTCTCCTAATGTTGTAGTGAGATTAGCTCACTTTATA  150

seq1  TTAGATTCATAAACACCTAAATAGCACTGTTACTAATCTTTATTTCTTAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTCATAAACACCTAAATAGCACTGTTACTAATCTTTATTTCTTAT  200

seq1  ATAAAGAAAAAGGATCCGTGGGAGCTTAGGAGTGAGTTATGTTTTCAGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAAAAGGATCCGTGGGAGCTTAGGAGTGAGTTATGTTTTCAGAG  250

seq1  GTTCTTTGGATCGCCTTTCGGTTTTAGATAGCACCCCAATAGTTTCTCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGGATCGCCTTTCGGTTTTAGATAGCACCCCAATAGTTTCTCAC  300

seq1  AAGGAGTCAGGTAGCTCAGAAGCAATGAGAAAGCCCAAATTATCAACCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTCAGGTAGCTCAGAAGCAATGAGAAAGCCCAAATTATCAACCTG  350

seq1  CTGAGTAGAAGCTGAAAAAAAGTAAACAAACAAACAGCAACAACAAAGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAGAAGCTGAAAAAAAGTAAACAAACAAACAGCAACAACAAAGAA  400

seq1  CCAGGCAGTGAACTCCAAGAATTC  423
      ||||||||||||||||||||||||
seq2  CCAGGCAGTGAACTCCAAGAATTC  424