MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-172A13
Chromosome	3 (Build37)
Map Location	27,039,923 - 27,040,512
singlet/doublet	singlet
Overlap gene	Ect2
Upstream gene	Nlgn1, LOC229152, Spata16, LOC665258
Downstream gene	Aadacl1, LOC100040527, Tnfsf10, Ghsr, Fndc3b, E030011K20Rik, Pld1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Nlgn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192167 MGI:2179435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC229152 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:229152
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Spata16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70862 MGI:1918112
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665258 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	Ect2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13605 MGI:95281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aadacl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320024 MGI:2443191
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040527 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040527
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Tnfsf10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22035 MGI:107414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ghsr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208188 MGI:2441906
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fndc3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72007 MGI:1919257
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E030011K20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208613 MGI:2685410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 2 Proteins

name	Pld1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18805 MGI:109585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nlgn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34447216 GeneID:192167 MGI:2179435
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuroligin 1 transcript_id : NM_138666.2

name	Spata16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375818 GeneID:70862 MGI:1918112
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated 16 transcript_id : NM_029150.2

name	Spata16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312343 GeneID:70862 MGI:1918112
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated 16 transcript_id : NM_027583.1

name	Ect2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131143 GeneID:13605 MGI:95281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ect2 oncogene transcript_id : NM_007900.2

name	Aadacl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363800 GeneID:320024 MGI:2443191
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arylacetamide deacetylase-like 1 transcript_id : NM_178772.3

name	Tnfsf10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79750226 GeneID:22035 MGI:107414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor (ligand) superfamily, member 10 transcript_id : NM_009425.2

name	Ghsr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801989 GeneID:208188 MGI:2441906
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth hormone secretagogue receptor transcript_id : NM_177330.3

name	Fndc3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27502352 GeneID:72007 MGI:1919257
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type III domain containing 3B transcript_id : NM_173182.1

name	E030011K20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250854 GeneID:208613 MGI:2685410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 2 Proteins product : RIKEN cDNA E030011K20 gene transcript_id : XM_149293.6

name	Pld1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47087137 GeneID:18805 MGI:109585
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase D1 transcript_id : NM_008875.3

name	Spata16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28077041 CCDS:CCDS17269.1 GeneID:70862 MGI:1918112
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; spermatogenesis-related protein product : Nyd-sp12 protein isoform 2 protein_id : NP_083426.1

name	Spata16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312344 GeneID:70862 MGI:1918112
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; spermatogenesis-related protein product : Nyd-sp12 protein isoform 1 protein_id : NP_081859.1

name	Ect2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681261 CCDS:CCDS17270.1 GeneID:13605 MGI:95281
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 product : ect2 oncogene protein_id : NP_031926.1

name	Aadacl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520239 CCDS:CCDS17271.1 GeneID:320024 MGI:2443191
definition	codon_start : 1 product : arylacetamide deacetylase-like 1 protein_id : NP_848887.1

name	Tnfsf10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678431 CCDS:CCDS17272.1 GeneID:22035 MGI:107414
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005164 - tumor necrosis factor receptor binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : TNF-related apoptosis inducing ligand; TRAIL/APO2L product : tumor necrosis factor (ligand) superfamily, member 10 protein_id : NP_033451.1

name	Ghsr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893445 CCDS:CCDS17273.1 GeneID:208188 MGI:2441906
definition	GO_component : GO:0009986 - cell surface [Evidence ISS] GO_function : GO:0001616 - growth hormone secretagogue receptor activity [Evidence ISS]; GO:0016520 - growth hormone-releasing hormone receptor activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0008343 - adult feeding behavior [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0030252 - growth hormone secretion [Evidence ISS]; GO:0009755 - hormone-mediated signaling [Evidence ISS]; GO:0032100 - positive regulation of appetite [Evidence IMP]; GO:0040018 - positive regulation of body size [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G-protein coupled receptor; growth hormone secretagogue receptor type 1 product : growth hormone secretagogue receptor protein_id : NP_796304.1

name	Fndc3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27502353 CCDS:CCDS17274.1 GeneID:72007 MGI:1919257
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0045600 - positive regulation of fat cell differentiation [Evidence IPI] codon_start : 1 exception : mismatches in translation note : fibronectin domain-containing protein 3b product : FAD104 protein_id : NP_775274.1

name	E030011K20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250855 GeneID:208613 MGI:2685410
definition	codon_start : 1 product : hypothetical protein protein_id : XP_149293.4

name	Pld1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059071 CCDS:CCDS17275.1 GeneID:18805 MGI:109585
definition	EC_number : 3.1.4.4 GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005768 - endosome [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0004630 - phospholipase D activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0016042 - lipid catabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : choline phosphatase 1 product : phospholipase D1 protein_id : NP_032901.2

name	LOC229152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:229152
definition	number : 1 pseudo : _no_value

name	LOC229152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:229152
definition	number : 2 pseudo : _no_value

name	LOC229152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:229152
definition	number : 3 pseudo : _no_value

name	LOC229152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:229152
definition	number : 4 pseudo : _no_value

name	LOC665258 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665258
definition	number : 1 pseudo : _no_value

name	LOC100040527 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040527
definition	number : 1 pseudo : _no_value

clone name	MSMg01-268K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-410A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132A22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312G01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-172A13.b	B6Ng01-172A13.g
ACC	GA000759	GA000760
length	584	567
definition	B6Ng01-172A13.b	B6Ng01-172A13.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	aacatgttcattcgttcgttctttctttctttgaaatatttgtttttttg tgtttgtttttgtatatttgtgtacttggatgaatatttttgtaccacat gtatacagtgtctgatgaaccccaaggttgcaggcatcaaatccactggg actagagttgctcagagtcaaacctgggccctggaatagcagccagggtt tttaactactgagccatctctctacccaacatattgttattattttttaa agtgtggttaacatttgttttaaagataaagccatgtgccaacaaaaact aaatttgaaaatagtatagaaaacatgaattctttgaatggcttagggaa taaaacataggttataaaactcatttataataagcatataagtaagacag gtttttgaaacaattaaaattgtaagatttgatatcattgggttttattt tataaaatcatttctcagaattaagcactttgtgcgtgattgtatgtgtg ggcagatttggaggatggagggtgtcttagtcagggtttctattcctgca caaacatcatgaccaagaagcaagttggggagga	tttatcgtgaagcctgtgagcaaggcaaacctgtctgtctttttgatcag agatatggtagtcttaattagttaataattgactatgagctaataaagtg gtggattaccttggggtaaggagctagaggtccattttctagctgtcaag ctgcagttagcttagctgtcaatgtagttagaaatcttggaggaataaat tataatctagatgttatatattaatttaaatgacactggttggtctatag tccactacctaaaccattttcccaggtcttgtggtctccacggcaaccca gacagagtcagtctggccatcagtcccaggagtcaagaagctttttttct gtggagtatgaatgtggcagaaatgactcaccttgtttaggcaatatgag gcatgtaactctctgagtatcctctgtttgtccatgatctaggccaagcc ctggcagcggacaaggcaatggagaagtgtttctcagtggttaccatacc acaatccaggcagtcttgtcactgtgtccatatcttctcagagaccttgg gtgggtgggggcggggg
quality values	Open. Hide. 21 59 46 47 59 62 56 62 49 30 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 23 30 23 23 23 23 26 32 32 38 48 40 32 38 54 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 50 40 49 56 56 48 28 54 59 59 62 48 49 62 62 62 62 62 62 59 56 50 56 46 49 62 59 62 59 54 62 62 59 62 46 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 50 51 62 59 50 59 62 59 62 62 62 62 62 59 59 54 54 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 59 51 62 62 62 62 62 62 62 62 62 62 62 62 62 43 50 48 54 43 35 59 62 62 59 46 56 56 46 54 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 43 56 56 51 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 59 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 54 58 58 58 58 58 54 58 58 54 52 47 58 54 58 58 58 58 58 52 41 44 46 37 45 46 51 50 58 58 29 58 29 53 53 51 51 49 51 50 51 54 48 49 52 50 42 39 48 46 49 46 38 41 35 39 43 50 48 48 37 54 58 50 50 50 44 49 53 51 58 41 41 39 54 42 44 20	Open. Hide. 62 62 59 62 59 59 17 12 13 11 11 7 8 13 23 23 23 23 26 34 43 49 59 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 43 30 24 27 25 27 23 27 27 28 34 32 28 50 51 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 54 62 62 59 62 62 56 54 54 62 56 62 62 62 59 59 54 46 62 62 62 62 54 54 54 46 48 62 59 59 59 56 62 62 59 59 59 59 59 49 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 59 59 62 62 54 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 59 59 62 62 49 51 59 59 59 59 59 51 62 62 62 62 62 56 59 59 59 48 56 62 62 62 62 59 62 62 62 62 59 49 59 59 62 59 62 59 62 59 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 59 59 56 46 59 59 59 59 62 59 62 62 59 59 59 59 50 56 44 44 56 51 56 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 49 44 44 50 44 50 50 51 62 56 62 56 56 62 62 56 62 47 54 62 62 62 62 62 62 54 56 62 43 41 56 56 51 51 56 56 27 38 14 13 20 18 30 21 26 32 32 23 30 20 40 16 23 31 25 56 47 62 38 39 39 16 17 38 27 38 30 38 42 21 14 8 9 18 18 38 38 47 47 52 39 38 52 43 33 38 47 47 42 52 52 39 38 38 52 29 31 29 29 34 34 44 58 48 42 41 34 31 45 32 43 52 34 43 40 52 47 40 42 29 33 42 25 33 29 16 25 23 52 42 36 25 33 47 28 32 34 42 46 33 37 42 34 26 14 13 9 9 9 7 9 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_27039923_27040512
seq2: B6Ng01-172A13.b_45_634 (reverse)

seq1  TCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACC  50

seq1  CTGACTAAGACACCCTCCATCCTCCAAATCTGCCCACACATACAATCACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAAGACACCCTCCATCCTCCAAATCTGCCCACACATACAATCACG  100

seq1  CACAAAGTGCTTAATTCTGAGAAATGATTTTATAAAATAAAACCCAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGTGCTTAATTCTGAGAAATGATTTTATAAAATAAAACCCAATGA  150

seq1  TATCAAATCTTACAATTTTAATTGTTTCAAAAACCTGTCTTACTTATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATCTTACAATTTTAATTGTTTCAAAAACCTGTCTTACTTATATG  200

seq1  CTTATTATAAATGAGTTTTATAACCTATGTTTTATTCCCTAAGCCATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATAAATGAGTTTTATAACCTATGTTTTATTCCCTAAGCCATTCA  250

seq1  AAGAATTCATGTTTTCTATACTATTTTCAAATTTAGTTTTTGTTGGCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCATGTTTTCTATACTATTTTCAAATTTAGTTTTTGTTGGCACA  300

seq1  TGGCTTTATCTTTAAAACAAATGTTAACCACACTTTAAAAAATAATAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTATCTTTAAAACAAATGTTAACCACACTTTAAAAAATAATAACA  350

seq1  ATATGTTGGGTAGAGAGATGGCTCAGTAGTTAAAAACCCTGGCTGCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTGGGTAGAGAGATGGCTCAGTAGTTAAAAACCCTGGCTGCTATT  400

seq1  CCAGGGCCCAGGTTTGACTCTGAGCAACTCTAGTCCCAGTGGATTTGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCCCAGGTTTGACTCTGAGCAACTCTAGTCCCAGTGGATTTGATG  450

seq1  CCTGCAACCTTGGGGTTCATCAGACACTGTATACATGTGGTACAAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAACCTTGGGGTTCATCAGACACTGTATACATGTGGTACAAAAATA  500

seq1  TTCATCCAAGTACACAAATATACAAAAACAAACACAAAAAAACAAATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCAAGTACACAAATATACAAAAACAAACACAAAAAAACAAATATT  550

seq1  TCAAAGAAAGAAAGAACGAACGAATGAACATGTTGAATTC  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAAGAAAGAACGAACGAATGAACATGTTGAATTC  590

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information