BAC Information

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BAC

Clone NameB6Ng01-172L17
Chromosome3 (Build37)
Map Location 76,379,696 - 76,512,897
singlet/doubletdoublet
Overlap geneFstl5
Upstream geneSerpini1, Golph4
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172L17.bB6Ng01-172L17.g
ACCGA001272GA001273
length1,116974
definitionB6Ng01-172L17.b B6Ng01-172L17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,511,788 - 76,512,897)(76,379,696 - 76,380,531)
sequence
gaattcccagataatcatacaccaataatataatgcactctagtgaatga
aagcaaaatgtggacacaatacattgcaaacatttttaccatacaaattt
ttctcccttcctgtccattttctatagcacaatggacatagtacagtgaa
tgttggatagcttctcatctgtatacagcccaaggccaaattatgccttc
acatgacatttcattgaaggtcaaacaaatgcctgaaggcaggatttggc
gcaagatataaacatttcttaatgacagtagattcattgcttatgaggtt
gtccaatatgcagagcttagccttccttttttttttttccttccatgaca
tttccttcaaggcacaaaagattttaaacagtggacgggacagagtattt
tgaattaagaattttaaggtttaacacgaccttttatttctgatttaagc
atagcaaaataacagaggaaaaaaaaatgccgtaaagaatgacatgatgc
ttaggtcatctgaaattccctgcagtgtattttttttttaaataatttaa
atctcatttcattggtttaaaatatagctacatgtttgattcttgtgagt
gctgtaatttccaattaaatattgtatgaaatgtttctaactagccaatt
atcattgtaaaaaaaaatctatcttatttgaacaaacagaggggatttga
ctagaatataaatttggaaaagttaagttgtaatttaaatatggatgaag
tgcaatgtactgtaaaactcttctttcataattaggtaagagggctcctt
aggcatcgccaacccaaacaactgtatttcctttctgaacctcagtgatc
tcacagtttaatttattaaggcgaccatccaggatgaagagagaatcttt
tggaaggtgtcatcaggtactgtccaaacagggccactgccttgggatgt
gcctgtttttctggctccagggcccagtcttctgtcttggagaggtcttt
gaggcttttgatcatcttgaaccttcccagagaaagctcacaaagagtac
atcctgtttgttggccttgagctggcataaaatgttgtactggtgggctt
ctgtgaagaatggctg

gaattcaaacagggcaggaacttggatggaggagcttatgcagaggccat
ggagtagtgctgcctactactggctttcttgccctggcctaccaggttaa
tttcttatggaactatagcccagagatagcagcactcacagtgggctgta
ccttctcccaattaattgttaattaacaaaatggcctgcagctggattgt
aaggaggcattttctcaattgttattcttttttcatacacctctagcttg
tgtcaagtggacgtgaagctagccagggccaccctttaacatagataaga
tctcttccctatgcactaagagttaaacaaaatgactagttcagtcttca
ttcttcttgagtttcatgtgtttagcaaattgtatcttatatcttgggta
tcctaggtttggggctaatatccacttatcagtgagtacatattgtgtga
gttcctttgtgaatgtgttacctcactcaggatgatgccctccacgtcca
tccatttggctaggaatttcataaattcattctttttaatagctgagtag
tactccattgtgtagatgtaccacattttctgtatccattcctctgttga
ggggcatctgggttctttccagcttctggctattataaataaggctgcta
tgaacatagtggagcatgtgtccttcttaccagttggggcatcttctgga
tatatgcccaggagaggtattgctggatcctccggtagtactatgtccaa
ttttctgaggaaccgccagactgatttccagagtggttgtacaagcctgc
aatcccaccaacaatggaggagtgttcctctttctccacatccacggcag
catctgctgtcacctgaatttttgatcttagccattctgactggtgtgag
gtggaatctcagggttgttttgatttgcatttcctgatgattaaaggatg
tgaacattttttcaggtgcttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76511788_76512897
seq2: B6Ng01-172L17.b_43_1158 (reverse)

seq1  CAGCCATCCTTCACAGAAGCCCACCAGTACAACA-TCTATGGCAGCTCAA  49
      ||||||| |||||||||||||||||||||||||| | |||| ||||||||
seq2  CAGCCATTCTTCACAGAAGCCCACCAGTACAACATTTTATGCCAGCTCAA  50

seq1  -GCCAACAAACA-GATGTACTCTTTGTGGAGCTTTCCTCTGGGAAGG-TC  96
       ||||||||||| |||||||||||||| ||||||| ||||||||||| ||
seq2  GGCCAACAAACAGGATGTACTCTTTGT-GAGCTTT-CTCTGGGAAGGTTC  98

seq1  AAGATGATCAAAAGCCTCAAAGAACCTCT-CAAGACAGAAGACT-GGCCC  144
      |||||||||||||||||||||| |||||| |||||||||||||| |||||
seq2  AAGATGATCAAAAGCCTCAAAG-ACCTCTCCAAGACAGAAGACTGGGCCC  147

seq1  TGGAGCCAGAAAAACAGGCACAT-CCAAGGCAGTGG-CCTGTTTGGACAG  192
      ||||||||||||||||||||||| |||||||||||| |||||||||||||
seq2  TGGAGCCAGAAAAACAGGCACATCCCAAGGCAGTGGCCCTGTTTGGACAG  197

seq1  TACCTGATGACACCTTCC-AAAGATTCTCTCTTCATCCTGGATGGTCGCC  241
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TACCTGATGACACCTTCCAAAAGATTCTCTCTTCATCCTGGATGGTCGCC  247

seq1  TTAATAAATTAAACTGTGAGATCACTGAGGTTCAGAAAGGAAATACAGTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATTAAACTGTGAGATCACTGAGGTTCAGAAAGGAAATACAGTT  297

seq1  GTTTGGGTTGGCGATGCCTAAGGAGCCCTCTTACCTAATTATGAAAGAAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGTTGGCGATGCCTAAGGAGCCCTCTTACCTAATTATGAAAGAAG  347

seq1  AGTTTTACAGTACATTGCACTTCATCCATATTTAAATTACAACTTAACTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACAGTACATTGCACTTCATCCATATTTAAATTACAACTTAACTT  397

seq1  TTCCAAATTTATATTCTAGTCAAATCCCCTCTGTTTGTTCAAATAAGATA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATTTATATTCTAGTCAAATCCCCTCTGTTTGTTCAAATAAGATA  447

seq1  GATTTTTTTTTACAATGATAATTGGCTAGTTAGAAACATTTCATACAATA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTTACAATGATAATTGGCTAGTTAGAAACATTTCATACAATA  497

seq1  TTTAATTGGAAATTACAGCACTCACAAGAATCAAACATGTAGCTATATTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGGAAATTACAGCACTCACAAGAATCAAACATGTAGCTATATTT  547

seq1  TAAACCAATGAAATGAGATTTAAATTATTTAAAAAAAAAATACACTGCAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAATGAAATGAGATTTAAATTATTTAAAAAAAAAATACACTGCAG  597

seq1  GGAATTTCAGATGACCTAAGCATCATGTCATTCTTTACGGCATTTTTTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTCAGATGACCTAAGCATCATGTCATTCTTTACGGCATTTTTTTT  647

seq1  TCCTCTGTTATTTTGCTATGCTTAAATCAGAAATAAAAGGTCGTGTTAAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTTATTTTGCTATGCTTAAATCAGAAATAAAAGGTCGTGTTAAA  697

seq1  CCTTAAAATTCTTAATTCAAAATACTCTGTCCCGTCCACTGTTTAAAATC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAATTCTTAATTCAAAATACTCTGTCCCGTCCACTGTTTAAAATC  747

seq1  TTTTGTGCCTTGAAGGAAATGTCATGGAAGGAAAAAAAAAAAAGGAAGGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGCCTTGAAGGAAATGTCATGGAAGGAAAAAAAAAAAAGGAAGGC  797

seq1  TAAGCTCTGCATATTGGACAACCTCATAAGCAATGAATCTACTGTCATTA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCTGCATATTGGACAACCTCATAAGCAATGAATCTACTGTCATTA  847

seq1  AGAAATGTTTATATCTTGCGCCAAATCCTGCCTTCAGGCATTTGTTTGAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTTTATATCTTGCGCCAAATCCTGCCTTCAGGCATTTGTTTGAC  897

seq1  CTTCAATGAAATGTCATGTGAAGGCATAATTTGGCCTTGGGCTGTATACA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATGAAATGTCATGTGAAGGCATAATTTGGCCTTGGGCTGTATACA  947

seq1  GATGAGAAGCTATCCAACATTCACTGTACTATGTCCATTGTGCTATAGAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAAGCTATCCAACATTCACTGTACTATGTCCATTGTGCTATAGAA  997

seq1  AATGGACAGGAAGGGAGAAAAATTTGTATGGTAAAAATGTTTGCAATGTA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACAGGAAGGGAGAAAAATTTGTATGGTAAAAATGTTTGCAATGTA  1047

seq1  TTGTGTCCACATTTTGCTTTCATTCACTAGAGTGCATTATATTATTGGTG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCCACATTTTGCTTTCATTCACTAGAGTGCATTATATTATTGGTG  1097

seq1  TATGATTATCTGGGAATTC  1110
      |||||||||||||||||||
seq2  TATGATTATCTGGGAATTC  1116


seq1: chr3_76379696_76380531
seq2: B6Ng01-172L17.g_64_899

seq1  GAATTCAAACAGGGCAGGAACTTGGATGGAGGAGCTTATGCAGAGGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAGGGCAGGAACTTGGATGGAGGAGCTTATGCAGAGGCCAT  50

seq1  GGAGTAGTGCTGCCTACTACTGGCTTTCTTGCCCTGGCCTACCAGGTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGTGCTGCCTACTACTGGCTTTCTTGCCCTGGCCTACCAGGTTAA  100

seq1  TTTCTTATGGAACTATAGCCCAGAGATAGCAGCACTCACAGTGGGCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATGGAACTATAGCCCAGAGATAGCAGCACTCACAGTGGGCTGTA  150

seq1  CCTTCTCCCAATTAATTGTTAATTAACAAAATGGCCTGCAGCTGGATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCCAATTAATTGTTAATTAACAAAATGGCCTGCAGCTGGATTGT  200

seq1  AAGGAGGCATTTTCTCAATTGTTATTCTTTTTTCATACACCTCTAGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGCATTTTCTCAATTGTTATTCTTTTTTCATACACCTCTAGCTTG  250

seq1  TGTCAAGTGGACGTGAAGCTAGCCAGGGCCACCCTTTAACATAGATAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGTGGACGTGAAGCTAGCCAGGGCCACCCTTTAACATAGATAAGA  300

seq1  TCTCTTCCCTATGCACTAAGAGTTAAACAAAATGACTAGTTCAGTCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCCTATGCACTAAGAGTTAAACAAAATGACTAGTTCAGTCTTCA  350

seq1  TTCTTCTTGAGTTTCATGTGTTTAGCAAATTGTATCTTATATCTTGGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTGAGTTTCATGTGTTTAGCAAATTGTATCTTATATCTTGGGTA  400

seq1  TCCTAGGTTTGGGGCTAATATCCACTTATCAGTGAGTACATATTGTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGTTTGGGGCTAATATCCACTTATCAGTGAGTACATATTGTGTGA  450

seq1  GTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCACGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCACGTCCA  500

seq1  TCCATTTGGCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTGAGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTGGCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTGAGTAG  550

seq1  TACTCCATTGTGTAGATGTACCACATTTTCTGTATCCATTCCTCTGTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCATTGTGTAGATGTACCACATTTTCTGTATCCATTCCTCTGTTGA  600

seq1  GGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTA  650

seq1  TGAACATAGTGGAGCATGTGTCCTTCTTACCAGTTGGGGCATCTTCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATAGTGGAGCATGTGTCCTTCTTACCAGTTGGGGCATCTTCTGGA  700

seq1  TATATGCCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAA  750

seq1  TTTTCTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGC  800

seq1  AATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTC  836
      ||||||||||||||||||||||||||||||||||||
seq2  AATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTC  836


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