BAC Information

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BAC

Clone NameB6Ng01-172N07
Chromosome3 (Build37)
Map Location 13,072,077 - 13,073,160
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621965, LOC100039798, EG668033, LOC668037
Downstream geneLOC100039823, LOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172N07.bB6Ng01-172N07.g
ACCGA001343GA001344
length1,0981,194
definitionB6Ng01-172N07.b B6Ng01-172N07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatactctttgtgttacatgagaaagggaatcttatttttaag
taaaaagaatttttcctgtgtttactctaggaaagctttgcaggaatcaa
actgtggtaaagtttatggaaaaaggttactcactcattccctaccttct
gatctgtaatttctccactgcatgcacatgactaaagtagcctccacagt
tatgatgctcacaaggcatttcagagaatttcctggataaaggttttaat
taaagaattatccaactttgtctagccagacagtacaatagcaatcactg
cttagacatcaagcataaatttccaaatcccaataaaattaaagcatcct
tttgtattaaccacatattaaattataatatttataagaagtacatatca
taatatattttagtacaaaaatttgaaatttaagctctcatataaaaaac
aagatacaatttgtacacatgatccactttttttctatcatcattttctg
aatggtttcatttaatatcaatttgttattttaaaatgccataaaatctt
acagtcccatcattaaaactatagctcataggtgacatttggtaggaaaa
tggaagatcagatcctagactttacccttatcttcttatctaaattcaca
tgtctttccttcaaaattatggagaataaaaaggttcactgtaaatgaac
gtgtgctacaaatccccgtctttacactctaatgtttatgagttattctt
cactgctacacaaaattgttataccctgtatactatgcttactgcatgat
ttttcaaattcataatctttgaaatgagaataataacatttggccttgca
gatagtaagatactgtgaaaaatgagctatcatatctgatattttaccaa
caaatattagctgtttctcattttatcccattcaatatttgagtggcata
atatataataattaagggatctgggatgctcaaggtcaaatttaaaaaac
agaaaataaagtttcgtgttatgaagattgtagttcatatattcacccaa
aggactttggagtcagattagtctctggactaaatgatctaaaaattg

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaaccggacatagtactaccggatgatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacaaaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaagttcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
aaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggatacccaagatataagatataattcgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctaaaaaaca
cagaagtggatgctcaccagtcagctaatggatggatcataggctcccaa
atggaggagctagaagaaagtagctcaaggagcttaaagggatctgcaac
ttattaggtgaacacatatgaacctaccagtaccccggagctcttcactc
tagctgcatatattatcaaaagatgcctagtccgcccatcactggaaaga
gagttcatgacatgcaacttatatgcccagttactgggtaacctatggtc
tatagggcattgcctgttactggggaatgtcgctctactacgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_13072077_13073160
seq2: B6Ng01-172N07.b_43_1140

seq1  GAATTCATATACTCTTTGTGTTACATGAGAAAGGGAATCTTATTTTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATACTCTTTGTGTTACATGAGAAAGGGAATCTTATTTTTAAG  50

seq1  TAAAAAGAATTTTTCCTGTGTTTACTCTAGGAAAGCTTTGCAGGAATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAATTTTTCCTGTGTTTACTCTAGGAAAGCTTTGCAGGAATCAA  100

seq1  ACTGTGGTAAAGTTTATGGAAAAAGGTTACTCACTCATTCCCTACCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGTAAAGTTTATGGAAAAAGGTTACTCACTCATTCCCTACCTTCT  150

seq1  GATCTGTAATTTCTCCACTGCATGCACATGACTAAAGTAGCCTCCACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTAATTTCTCCACTGCATGCACATGACTAAAGTAGCCTCCACAGT  200

seq1  TATGATGCTCACAAGGCATTTCAGAGAATTTCCTGGATAAAGGTTTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGCTCACAAGGCATTTCAGAGAATTTCCTGGATAAAGGTTTTAAT  250

seq1  TAAAGAATTATCCAACTTTGTCTAGCCAGACAGTACAATAGCAATCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATTATCCAACTTTGTCTAGCCAGACAGTACAATAGCAATCACTG  300

seq1  CTTAGACATCAAGCATAAATTTCCAAATCCCAATAAAATTAAAGCATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACATCAAGCATAAATTTCCAAATCCCAATAAAATTAAAGCATCCT  350

seq1  TTTGTATTAACCACATATTAAATTATAATATTTATAAGAAGTACATATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTAACCACATATTAAATTATAATATTTATAAGAAGTACATATCA  400

seq1  TAATATATTTTAGTACAAAAATTTGAAATTTAAGCTCTCATATAAAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATTTTAGTACAAAAATTTGAAATTTAAGCTCTCATATAAAAAAC  450

seq1  AAGATACAATTTGTACACATGATCCACTTTTTTTCTATCATCATTTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACAATTTGTACACATGATCCACTTTTTTTCTATCATCATTTTCTG  500

seq1  AATGGTTTCATTTAATATCAATTTGTTATTTTAAAATGCCATAAAATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTCATTTAATATCAATTTGTTATTTTAAAATGCCATAAAATCTT  550

seq1  ACAGTCCCATCATTAAAACTATAGCTCATAGGTGACATTTGGTAGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCCATCATTAAAACTATAGCTCATAGGTGACATTTGGTAGGAAAA  600

seq1  TGGAAGATCAGATCCTAGACTTTACCCTTATCTTCTTATCTAAATTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGATCAGATCCTAGACTTTACCCTTATCTTCTTATCTAAATTCACA  650

seq1  TGTCTTTCCTTCAAAATTATGGAGAATAAAAAGGTTCACTGTAAATGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCCTTCAAAATTATGGAGAATAAAAAGGTTCACTGTAAATGAAC  700

seq1  GTGTGCTACAAATCCCCGTCTTTACACTCTAATGTTTATGAGTTATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTACAAATCCCCGTCTTTACACTCTAATGTTTATGAGTTATTCTT  750

seq1  CACTGCTACACAAAATTGTTATACCCTGTATACTATGCTTACTGCATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTACACAAAATTGTTATACCCTGTATACTATGCTTACTGCATGAT  800

seq1  TTTTCAAATTCATAATCTTTGAAATGAGAATAATAACA-TTGGCCTTGCA  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTTCAAATTCATAATCTTTGAAATGAGAATAATAACATTTGGCCTTGCA  850

seq1  GATAGTAAGATACTGTGAAAAATGAGCTATCATATCTGATATTTTACCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTAAGATACTGTGAAAAATGAGCTATCATATCTGATATTTTACCAA  900

seq1  CAAATATTAGCTGTTTCTCATTTTAT-CCAATCAATATTTGAGT-GCATA  947
      |||||||||||||||||||||||||| ||| ||||||||||||| |||||
seq2  CAAATATTAGCTGTTTCTCATTTTATCCCATTCAATATTTGAGTGGCATA  950

seq1  ATATATATTAATTAA-GGATCTGGGATGCTCAAGGTCAAA-TTAAAAAAC  995
      ||||||| ||||||| |||||||||||||||||||||||| |||||||||
seq2  ATATATAATAATTAAGGGATCTGGGATGCTCAAGGTCAAATTTAAAAAAC  1000

seq1  AG-AAATAAAGTTT-GTGTTATG-AGATTG-AGTTC--ATATTCA-CCAA  1038
      || ||||||||||| |||||||| |||||| |||||  ||||||| ||||
seq2  AGAAAATAAAGTTTCGTGTTATGAAGATTGTAGTTCATATATTCACCCAA  1050

seq1  AGGACTTT-GAGTCAGA-TAGTCTTCTGACT-AATGATCTAAAATATTG  1084
      |||||||| |||||||| ||||||   |||| |||||||||||| ||||
seq2  AGGACTTTGGAGTCAGATTAGTCTCTGGACTAAATGATCTAAAA-ATTG  1098


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