BAC Information

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BAC

Clone NameB6Ng01-173I12
Chromosome3 (Build37)
Map Location 19,025,904 - 19,026,559
singlet/doubletsinglet
Overlap genenone
Upstream geneCyp7b1, LOC622921, LOC100040153
Downstream geneArmc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55, Crh, LOC665002, LOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173I12.bB6Ng01-173I12.g
ACCGA001854GA001855
length6581,205
definitionB6Ng01-173I12.b B6Ng01-173I12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgaagaacctggagactcctagattgctacctgcttcctata
atcatctcatttgatccttgtttgtttttttaaaaaaatactttttaata
tatgtttgaaatcatttataactacatcatttcccctcttccctttcctc
cctctaccccatgccttctgcccctttgctctcatctcaaattcaaagcc
tcttattctttaattattggtgtgtgtgttgctaaataactaagtccaac
ctgctcaaactaaatgtatagtgtcacttagggtttgggttggtatgtgt
atgtatgttttcaggtatgaccatttggagaagatactttctcctgctct
cagtgttccttagttgcttgtaattctttgtgtagatttgaggcctcctg
agttttccccttccatgttagtgtggctgttgtcatctttcttcaggtca
tgtttgtgcagccatgttgctgccccattttcacattggaatgatctgta
ggcttttaacagatagtacagtctgtgtcccaccccaggcagttgaacta
caactcccctgggggaggtggtagtggtggaccagtgcatggtatacatt
ataatagcattgaaatgatgttgattttgcggtgatgttgatcttctggg
attgactc
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcatggatgtggagaaagaggaacactcctccattgatggt
gggagtgcaggcttgtacaaccattctggaaatcagtctggcagttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagctgccttatttataatagccagaagctggaaagaacctaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacatggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtactcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacactgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgccggggtcctagcaa
acacagaagtgggatgctcacagtcagctaatggatggatcatagggctt
cccaatggaggagcttgaagaaagtactcaaggagcttaagggatctgca
accctatagggtgaacaacattatgacctaccagtaccccgggagctctt
gacttctagctgcattataatatacaaaagatggcctagtcgcccatcac
tggagaagagaggccatttgacttgcaaactttatatgctcattacatga
atccaggtctaaacgggactggggtggtcagggagattgcgctcgctagc
ttccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_19025904_19026559
seq2: B6Ng01-173I12.b_37_694 (reverse)

seq1  GAGTCAATCCCAG-AGCTCAACATCACCGC-AAATCAACATCATTTCAAT  48
      ||||||||||||| || ||||||||||||| |||||||||||||||||||
seq2  GAGTCAATCCCAGAAGATCAACATCACCGCAAAATCAACATCATTTCAAT  50

seq1  GCTATTATAATGTATCCCATGCACTGGTCCACCACTACCACCTCCCCCAG  98
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCTATTATAATGTATACCATGCACTGGTCCACCACTACCACCTCCCCCAG  100

seq1  GGGAGTTGTAGTTCAACTGCCTGGGGTGGGACACAGACTGTACTATCTGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTGTAGTTCAACTGCCTGGGGTGGGACACAGACTGTACTATCTGT  150

seq1  TAAAAGCCTACAGATCATTCCAATGTGAAAATGGGGCAGCAACATGGCTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCCTACAGATCATTCCAATGTGAAAATGGGGCAGCAACATGGCTG  200

seq1  CACAAACATGACCTGAAGAAAGATGACAACAGCCACACTAACATGGAAGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACATGACCTGAAGAAAGATGACAACAGCCACACTAACATGGAAGG  250

seq1  GGAAAACTCAGGAGGCCTCAAATCTACACAAAGAATTACAAGCAACTAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACTCAGGAGGCCTCAAATCTACACAAAGAATTACAAGCAACTAAG  300

seq1  GAACACTGAGAGCAGGAGAAAGTATCTTCTCCAAATGGTCATACCTGAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGAGAGCAGGAGAAAGTATCTTCTCCAAATGGTCATACCTGAAA  350

seq1  ACATACATACACATACCAACCCAAACCCTAAGTGACACTATACATTTAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACACATACCAACCCAAACCCTAAGTGACACTATACATTTAGT  400

seq1  TTGAGCAGGTTGGACTTAGTTATTTAGCAACACACACACCAATAATTAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCAGGTTGGACTTAGTTATTTAGCAACACACACACCAATAATTAAA  450

seq1  GAATAAGAGGCTTTGAATTTGAGATGAGAGCAAAGGGGCAGAAGGCATGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGAGGCTTTGAATTTGAGATGAGAGCAAAGGGGCAGAAGGCATGG  500

seq1  GGTAGAGGGAGGAAAGGGAAGAGGGGAAATGATGTAGTTATAAATGATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGGGAGGAAAGGGAAGAGGGGAAATGATGTAGTTATAAATGATTT  550

seq1  CAAACATATATTAAAAAGTATTTTTTTAAAAAAACAAACAAGGATCAAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATATATTAAAAAGTATTTTTTTAAAAAAACAAACAAGGATCAAAT  600

seq1  GAGATGATTATAGGAAGCAGGTAGCAATCTAGGAGTCTCCAGGTTCTTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGATTATAGGAAGCAGGTAGCAATCTAGGAGTCTCCAGGTTCTTCA  650

seq1  TGGAATTC  656
      ||||||||
seq2  TGGAATTC  658