BAC Information

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BAC

Clone NameB6Ng01-174N10
Chromosome3 (Build37)
Map Location 141,721,883 - 141,722,951
singlet/doubletsinglet
Overlap genenone
Upstream genePdha2, Unc5c, LOC100039923, Bmpr1b
Downstream geneGabarapl2-ps3, Pdlim5, Gbp5, Gbp6, Gbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2, LOC100040053, LOC100039883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174N10.bB6Ng01-174N10.g
ACCGA002806GA002807
length7991,076
definitionB6Ng01-174N10.b B6Ng01-174N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cttgagctcagagaggagggatttaatggagacctcccgtttacaagtga
gtgttctctcactttcagctcattttcaagtagtgggtctctgtatttgt
taccatctggtacaggacaaagcttctctgatggtggataagcaagatac
tgatctacgaatgtagcagaatgtcattgggagtcattttgttgctacgt
ttctttagctgaacagtagtatttggtcaagtagtgtcaggttatagatt
ccatttcacggagtgggccttaaattcaatcagacagtggttggttggtc
actccctccacttcagtgccactgttgtaccagtgtatcatgtgggcagg
ccaccattgtagattgaaggctttatatcaggcttggtgtttacttttct
tctcaggtagtgtgcagagttccttccagtaccgtgaacactaatcagta
ggggtgaagtctctaggtagacaccaacttgactcctcagtgttcaacaa
attatgtcaggtgttttcttcagcatcagggccttgacatcatttgtaga
gagcaaataacagcctgggcaatagcctgggtttttgtgggatcctctga
agccccattggcaagcaatttgattagatgtaactcatttttggcactag
atgtttaatttggtagtgagagatgtctagttgtaactttgtcatgccca
tatttagtagttctattagtataaggaccttttcttgatgattaataaat
tgattatagacccagcctagccccattgtgaatggtgttcaccactgag
gaattcatgagcagcctatatttgaacgcttacctcatgaagcaattttg
aacttgagaagtttctagtgtgggaatatagtcaaggaacatatacaagg
atttcttgaagaaaagtcatagtcaaaatagagctaattttcagctttca
catttgaatagaacaaattcaggacatcaagggattagatacataaaatc
atctttcaagtgtgatatttaaaatctccatttccaaaatattccttctg
tagaagaacagatattctatacaagatattctgatagttgagccttgatt
taattgccaaaaatagcgagaactcacagactacacattcacaattttgt
cttagtaatttaataaattacatcatcttcaacaaagcaattagagattt
aacatttataaacactttataaacatcaagaaaaaggtaccattcatttt
tatccgccgagttagaaataacagatatttttataaatccccaaagagct
gttacctatgactgcatgactgaatgtaaaggagacttctagatgaaaga
agtctgtaactattatccttgctggaggattggtagtccctcctgtctaa
gaagttacactggtgaacgtggacaaaaaaatatttctttttggaaaata
tatttgagtccccaaaagatgcaattcaagtggcaatcagtagcttctta
tggacatcccacaaatagccacagttcatttcctgaccttataagatttc
tgccctgctatagcattctaacaataaagcacatggtgcagttaattttg
tatattatgggaatactcataggatggcttaaagattgctttgaagcagg
acatattcagattttaaccaatggattgtgtctaagaatctcaacaattt
aaataattttacttgatccaatatcccatagatcactcctgaaagaatct
tgattatattatttaataaacagagctgatttgcaggagactaaattctt
cttcatgaatggtttttcagaaatgagtatgtttgtctaaatctttcata
ttgggttaaaaactaacagacgaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141721883_141722951
seq2: B6Ng01-174N10.g_73_1148

seq1  GAATTCATGAGCAGCCTATATTTGAACGCTTACCTCATGAAGCAATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGCAGCCTATATTTGAACGCTTACCTCATGAAGCAATTTTG  50

seq1  AACTTGAGAAGTTTCTAGTGTGGGAATATAGTCAAGGAACATATACAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAGAAGTTTCTAGTGTGGGAATATAGTCAAGGAACATATACAAGG  100

seq1  ATTTCTTGAAGAAAAGTCATAGTCAAAATAGAGCTAATTTTCAGCTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGAAGAAAAGTCATAGTCAAAATAGAGCTAATTTTCAGCTTTCA  150

seq1  CATTTGAATAGAACAAATTCAGGACATCAAGGGATTAGATACATAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAATAGAACAAATTCAGGACATCAAGGGATTAGATACATAAAATC  200

seq1  ATCTTTCAAGTGTGATATTTAAAATCTCCATTTCCAAAATATTCCTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCAAGTGTGATATTTAAAATCTCCATTTCCAAAATATTCCTTCTG  250

seq1  TAGAAGAACAGATATTCTATACAAGATATTCTGATAGTTGAGCCTTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAACAGATATTCTATACAAGATATTCTGATAGTTGAGCCTTGATT  300

seq1  TAATTGCCAAAAATAGCGAGAACTCACAGACTACACATTCACAATTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCCAAAAATAGCGAGAACTCACAGACTACACATTCACAATTTTGT  350

seq1  CTTAGTAATTTAATAAATTACATCATCTTCAACAAAGCAATTAGAGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTAATTTAATAAATTACATCATCTTCAACAAAGCAATTAGAGATTT  400

seq1  AACATTTATAAACACTTTATAAACATCAAGAAAAAGGTACCATTCATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTATAAACACTTTATAAACATCAAGAAAAAGGTACCATTCATTTT  450

seq1  TATCCGCCGAGTTAGAAATAACAGATATTTTTATAAATCCCCAAAGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCGCCGAGTTAGAAATAACAGATATTTTTATAAATCCCCAAAGAGCT  500

seq1  GTTACCTATGACTGCATGACTGAATGTAAAGGAGACTTCTAGATGAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTATGACTGCATGACTGAATGTAAAGGAGACTTCTAGATGAAAGA  550

seq1  AGTCTGTAACTATTATCCTTGCTGGAGGATTGGTAGTCCCTCCTGTCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTAACTATTATCCTTGCTGGAGGATTGGTAGTCCCTCCTGTCTAA  600

seq1  GAAGTTACACTGGTGAACGTGGACAAAAAAATA-TTCTTTTTGGAAAATA  649
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAAGTTACACTGGTGAACGTGGACAAAAAAATATTTCTTTTTGGAAAATA  650

seq1  TATTTGAGTCCCCAAAAGATGCAATTCAAGTGGCAATCAGTAGCTTCTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAGTCCCCAAAAGATGCAATTCAAGTGGCAATCAGTAGCTTCTTA  700

seq1  TGGACATCCCACAAATAGCCACAGTTCATTTCCTGACCTTATAAGATTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATCCCACAAATAGCCACAGTTCATTTCCTGACCTTATAAGATTTC  750

seq1  TGCCCTGCTATAGCATTCTAACAATAAAGCACATGGTGCAGTTAATTTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGCTATAGCATTCTAACAATAAAGCACATGGTGCAGTTAATTTTG  800

seq1  TATATTAT-GGAATACTCATAGGATGGCTTAAAGATTGCTTTGAAGCAGG  848
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATATTATGGGAATACTCATAGGATGGCTTAAAGATTGCTTTGAAGCAGG  850

seq1  ACATATTCAGA-TTTAACCAATGGATTGTGTCTAAG-ATCTCAACAATTA  896
      ||||||||||| |||||||||||||||||||||||| |||||||||||| 
seq2  ACATATTCAGATTTTAACCAATGGATTGTGTCTAAGAATCTCAACAATTT  900

seq1  AAATAATTTTACTTGATCCAATATCCCCATAGATCAACTCCTGAAAGAAT  946
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  AAATAATTTTACTTGATCCAATAT-CCCATAGATC-ACTCCTGAAAGAAT  948

seq1  C-TGAATATATAATTTAAT-AACAGAGCTGATTTGCAGGAGACTAAA-TC  993
      | ||| ||||| ||||||| ||||||||||||||||||||||||||| ||
seq2  CTTGATTATATTATTTAATAAACAGAGCTGATTTGCAGGAGACTAAATTC  998

seq1  TTCTTCATGAATTGGTTTTTAG-AATGAGTATGTTTGTCTAAAATCTTCA  1042
      |||||||||||| | |||| || ||||||||||||||||||||   ||||
seq2  TTCTTCATGAATGGTTTTTCAGAAATGAGTATGTTTGTCTAAATCTTTCA  1048

seq1  TATTTGTTTAAAAACT-ACAGACGAAGC  1069
      |||| | ||||||||| |||||||||||
seq2  TATTGGGTTAAAAACTAACAGACGAAGC  1076