BAC Information

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BAC

Clone NameB6Ng01-174P05
Chromosome3 (Build37)
Map Location 135,826,843 - 135,827,748
singlet/doubletsinglet
Overlap geneBank1
Upstream geneEG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2, Ube2d3, Manba, LOC668745, Nfkb1, ENSMUSG00000045520, Slc39a8, LOC100039350, LOC383923, LOC100039477
Downstream geneLOC668868, Ppp3ca, LOC668870
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174P05.b
ACCGA002888
length907
definitionB6Ng01-174P05.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctgctgactattgactgagaagagcatgggattctttccatg
agtcaggtgcttcccccacggccatttgtacctgcacagacatcacggtg
ctctctcaaagggaccatggccttccctcacataggctggaggcctcctc
acataagcacatttgatatgtcatgttgtcaggtgccttcttttacatga
actggggcattcctatgcattgtgcttactacttctcacgggaatgagag
tgctccctcacattggccacagtgttccttcacagagcttggatgctccc
tcacatagatatgaatggggtccctagctcatgctatcccactctcaaat
gggtgtagaaactcactacatggatccaagcatagtccctcataggagtt
gagtgttccccatagggatgagagtattgcctcagagatcaggatgcatc
ttcaaagaggccatggtgctccctcatcaattccaagacaagtactcctc
ataggggacttggtgcccctttgatatgggtgaaaagcatagtggtcaca
acaattctagccagatctaaggcctctacttctcattaaatgattctttc
atgaactaaactagaaagacatgtttacctaaacccagcaaataatagta
tttctaaatacaaatggaatttcattaagtggcctccgagtacacagcac
ccacacaacttgtaaggaagacacataaggaaagtacaacttctctgtcc
ttattttttcactctagggtaaacaggctattttatacagcctatacagg
gaaaacataatgacttaggtactcaacgaagcccagtgtattaagaacag
gtaactttttgtcatttgtcaagattgttgtgtttctctgtgggaatcta
gcacagt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_135826843_135827748
seq2: B6Ng01-174P05.b_45_951 (reverse)

seq1  ACTGTGCTAGAATCCCACAGAGATACACAACAATCTTGACAAATGACAAA  50
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  ACTGTGCTAGATTCCCACAGAGAAACACAACAATCTTGACAAATGACAAA  50

seq1  ATGTTACCTGTTCTTACTACACTGGGCTTCGTTGGGTACCT-AGTCATTT  99
      | |||||||||||||| ||||||||||||||||| |||||| ||||||| 
seq2  AAGTTACCTGTTCTTAATACACTGGGCTTCGTTGAGTACCTAAGTCATTA  100

seq1  TGTTTTTCCTTGTATATGGCTGTAT-AAATAGCCTGTTTAACCTAGAGTG  148
      || |||||| |||||| |||||||| |||||||||||||| |||||||||
seq2  TG-TTTTCCCTGTATA-GGCTGTATAAAATAGCCTGTTTACCCTAGAGTG  148

seq1  -AAAAATAAGGACAGAGAAGTTGTAACTTCCTTATGTGTCTTCCTTACAA  197
       ||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  AAAAAATAAGGACAGAGAAGTTGTACTTTCCTTATGTGTCTTCCTTACAA  198

seq1  GTTGTGTGGGTGCTGTGTACTCGGAGGCCACTTAATG-AATTCCATTTGT  246
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTTGTGTGGGTGCTGTGTACTCGGAGGCCACTTAATGAAATTCCATTTGT  248

seq1  ATTTAG-AATACTATTATTTGCTGGGTTTAGGTAAACATGTCTTTCTAGT  295
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAATACTATTATTTGCTGGGTTTAGGTAAACATGTCTTTCTAGT  298

seq1  TTAGTTCATGAAAGAATCATTTAATGAGAAGTAGAGGCCTTAGATCTGGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCATGAAAGAATCATTTAATGAGAAGTAGAGGCCTTAGATCTGGC  348

seq1  TAGAATTGTTGTGACCACTATGCTTTTCACCCATATCAAAGGGGCACCAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGTTGTGACCACTATGCTTTTCACCCATATCAAAGGGGCACCAA  398

seq1  GTCCCCTATGAGGAGTACTTGTCTTGGAACTGATGAGGGAGCACCATGGC  445
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTCCCCTATGAGGAGTACTTGTCTTGGAATTGATGAGGGAGCACCATGGC  448

seq1  CTCTTTGAAGATGCATCCTGATCTCTGAGGCAATACTCTCATCCCTATGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGAAGATGCATCCTGATCTCTGAGGCAATACTCTCATCCCTATGG  498

seq1  GGAACACTCAACTCCTATGAGGGACTATGCTTGGATCCATGTAGTGAGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACTCAACTCCTATGAGGGACTATGCTTGGATCCATGTAGTGAGTT  548

seq1  TCTACACCCATTTGAGAGTGGGATAGCATGAGCTAGGGACCCCATTCATA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACCCATTTGAGAGTGGGATAGCATGAGCTAGGGACCCCATTCATA  598

seq1  TCTATGTGAGGGAGCATCCAAGCTCTGTGAAGGAACACTCTGGCCAATGT  645
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTATGTGAGGGAGCATCCAAGCTCTGTGAAGGAACACTGTGGCCAATGT  648

seq1  GAGGGAGCACTCTCATTCCCGTGAGAAGTACTAAGGCCAATGCATAGGAA  695
      |||||||||||||||||||||||||||||| ||||  |||||||||||||
seq2  GAGGGAGCACTCTCATTCCCGTGAGAAGTAGTAAGCACAATGCATAGGAA  698

seq1  TGCCCCAGTTCATGTAAAAGAAGGCACCTGACAACATGACATAACAAATG  745
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCCCCAGTTCATGTAAAAGAAGGCACCTGACAACATGACATATCAAATG  748

seq1  TGCTTATGTGAGGAGGCCTCCAGCCTATGTGAGGGAAGGCCATGGTCCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATGTGAGGAGGCCTCCAGCCTATGTGAGGGAAGGCCATGGTCCCT  798

seq1  TTGAGAGAGCACCCTCATCTATGTGCAGGAACACCTGGCCTTGGGGGAAG  845
      ||||||||||||| | || | |||||||| |||  ||||| |||||||||
seq2  TTGAGAGAGCACCGTGATGTCTGTGCAGGTACAAATGGCCGTGGGGGAAG  848

seq1  CACCTGGCTCATGGCTAAGACCCCATGCTCTTCTCATGTCAATTTGTCAG  895
      |||||| |||||||  |  | ||||||||||||||| ||||| | |||||
seq2  CACCTGACTCATGGAAAGAATCCCATGCTCTTCTCA-GTCAA-TAGTCAG  896

seq1  CAGTGGAATTC  906
      ||| |||||||
seq2  CAGAGGAATTC  907