BAC Information

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BAC

Clone NameB6Ng01-175M22
Chromosome3 (Build37)
Map Location 73,931,344 - 73,932,384
singlet/doubletsinglet
Overlap genenone
Upstream geneBche, LOC667425
Downstream geneLOC619764, LOC667434, LOC100041551, EG667459, BC050789
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175M22.bB6Ng01-175M22.g
ACCGA003515GA003516
length1,1831,050
definitionB6Ng01-175M22.b B6Ng01-175M22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagtgcaatgataattctgtcatggaagaaataaagaaatcaa
agatggtttagattttagtgaaaatgaaggcacatcataccaaaatttac
aggatatgatgaaagcagtgttaagaggaaagttcatagatcatgtgatc
tcatacaagcaacttaacagcatattggaaagctctagaacagaaagtag
caaacataggcaaaagtagtagaaggcaggaaatagtcaaactcaggact
gaaaaaaaaaaaaaaacagtttacaacaaagagaatgatacaaagaatca
acaaaaccaagagctagttaattgagaatatcaataaggtagttaaacct
ttagcaaaactaactaaaggacacagaggcagtatcaaaattacaaaacc
agaaatgaaaagggagacagaacacccgaaactgaggaaattttaaaaag
tcatcagaacctactggaaaagcccatattctacaaaaactgaaaaatct
agatgatttcctatacagatatcatgtaccaaatttcaatcaagatcaca
tacatgatctaaacagccccataatacttaaggaaaaagaaatagtcctc
aaatcctcctaacccataaaagtcaaaggctaaatggttttagtgaaaaa
ttctaccagatattcaaaaagagctaataccaatactcctcaaaatattt
tacgaaagaggaacagaagaaacattacttatgtcattctatgaagccat
agtttactatgatacctaaagcacacaaagaaacaacaaagaaaagacaa
gtttagaccaatcttgattatgaatattgttgccaaagtaactcaataaa
attctctcaaacttccaagaacacatatcacaaactgaattccaagaaca
catcaaaacccatcatttcaccaaggatcaggtaggcttttatcccaagg
gatgcaggaatggtttcaatgttataaaaaatcccatcaacattatttac
acctattatgttatattccctagggacaagctaacatgggtcatcctatt
tagatgctcagagccttcacaaagtacacaatcctttcatattaaaaagc
tttggagagatcagaattcatggacctgatctaaccttaaagatatatcc
aatttatggaaaaaattattctagctttacatc
gaattcaaaagtactagaaaagtttagatttttggcagtaagcctccaag
atgacaattatttctggtgaataaaacagggtaaaagtcattttcttcct
ctaacatgttttatgacttttctcaaatacagtatgcatttagttatgcc
tgttgagaccccaaacttatccataaaccgcatcatatcagagatatgtc
ttataacatccttgggattctggaaggagtcatcagctttatcattctta
actgtggaggtcttacaaatttctcttacataaaaacctctaagtggtat
ttttttaaatataattttatttaaaagtgtttattatccagctaaaaagg
gccatcatgactttacgagaaaaccaagaatttacagtgcctcaccaaag
agaacacaactggtctggagagctaagaatcaattcgtattttcattatt
agtcttatttattatttagaaacatcagtggagtaccatgtaggatcttt
tgagtgtctttttaaacttgtaagcttacaaatgatatgttacattggca
ttttattagtgaatagggcatttaaacatgtttttatgtgtatggggcag
tgggcctgatttatcccagatctaacctcaggtgcaattcttcagggaaa
aaaaacattatttatttatttcattggttgtttgcttaattttatttatt
taatttatttatttggttggttgtttgctttgagacagtctctgctggcc
agaaacctataaagaagtccatcaagcaacaagaatccttttccctcctt
cttcccagcgctgaggctgagttcacatgcccatgtcaccaatcatatat
atatatatatatatatatatatatatatacacacatatacattacatata
tgcatacatatatatatacatatatgttgtttctaaaggttttttatttc
ctgatgttatttttaatgtattattttattaatcaatatatatatatata
tatatatatatatatattatattggtataccatacacggagcatggtttt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_73931344_73932384
seq2: B6Ng01-175M22.g_62_1111

seq1  GAATTCAAAAGTACTAGAAAAGTTTAGATTTTTGGCAGTAAGCCTCCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGTACTAGAAAAGTTTAGATTTTTGGCAGTAAGCCTCCAAG  50

seq1  ATGACAATTATTTCTGGTGAATAAAACAGGGTAAAAGTCATTTTCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATTATTTCTGGTGAATAAAACAGGGTAAAAGTCATTTTCTTCCT  100

seq1  CTAACATGTTTTATGACTTTTCTCAAATACAGTATGCATTTAGTTATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATGTTTTATGACTTTTCTCAAATACAGTATGCATTTAGTTATGCC  150

seq1  TGTTGAGACCCCAAACTTATCCATAAACCGCATCATATCAGAGATATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGACCCCAAACTTATCCATAAACCGCATCATATCAGAGATATGTC  200

seq1  TTATAACATCCTTGGGATTCTGGAAGGAGTCATCAGCTTTATCATTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACATCCTTGGGATTCTGGAAGGAGTCATCAGCTTTATCATTCTTA  250

seq1  ACTGTGGAGGTCTTACAAATTTCTCTTACATAAAAACCTCTAAGTGGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGAGGTCTTACAAATTTCTCTTACATAAAAACCTCTAAGTGGTAT  300

seq1  TTTTTTAAATATAATTTTATTTAAAAGTGTTTATTATCCAGCTAAAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAATATAATTTTATTTAAAAGTGTTTATTATCCAGCTAAAAAGG  350

seq1  GCCATCATGACTTTACGAGAAAACCAAGAATTTACAGTGCCTCACCAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCATGACTTTACGAGAAAACCAAGAATTTACAGTGCCTCACCAAAG  400

seq1  AGAACACAACTGGTCTGGAGAGCTAAGAATCAATTCGTATTTTCATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACAACTGGTCTGGAGAGCTAAGAATCAATTCGTATTTTCATTATT  450

seq1  AGTCTTATTTATTATTTAGAAACATCAGTGGAGTACCATGTAGGATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTATTTATTATTTAGAAACATCAGTGGAGTACCATGTAGGATCTTT  500

seq1  TGAGTGTCTTTTTAAACTTGTAAGCTTACAAATGATATGTTACATTGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCTTTTTAAACTTGTAAGCTTACAAATGATATGTTACATTGGCA  550

seq1  TTTTATTAGTGAATAGGGCATTTAAACATGTTTTTATGTGTATGGGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTAGTGAATAGGGCATTTAAACATGTTTTTATGTGTATGGGGCAG  600

seq1  TGGGCCTGATTTATCCCAGATCTAACCTCAGGTGCAATTCTTCAGGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTGATTTATCCCAGATCTAACCTCAGGTGCAATTCTTCAGGGAAA  650

seq1  AAAAACATTATTTATTTATTTCATTGGTTGTTTGCTTAATTTTATTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATTATTTATTTATTTCATTGGTTGTTTGCTTAATTTTATTTATT  700

seq1  TAATTTATTTATTTGGTTGGTTGTTTGCTTTGAGACAGTCTCTGCTGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATTTATTTGGTTGGTTGTTTGCTTTGAGACAGTCTCTGCTGGCC  750

seq1  AGAAACCTATAAAGAAGTCCATCAAGCAACAAGAATCCTTTTCCCTCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTATAAAGAAGTCCATCAAGCAACAAGAATCCTTTTCCCTCCTT  800

seq1  CTTCCCAGCGCTGAGGCTGAGTTCACATGCCCATGTCACCAATCATATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGCGCTGAGGCTGAGTTCACATGCCCATGTCACCAATCATATAT  850

seq1  ATATATATATATATATATATATATATATACACACATATACA-TACATATA  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATATATATATATATATATATATATATATACACACATATACATTACATATA  900

seq1  TGCATACATATATATATACATATATGTTGTTTCTAAAGG-TTTTTATTTC  948
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGCATACATATATATATACATATATGTTGTTTCTAAAGGTTTTTTATTTC  950

seq1  CTGATGTTA-TTTTAATGTATTA-TTTATTAATCAATATATATATATATA  996
      ||||||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  CTGATGTTATTTTTAATGTATTATTTTATTAATCAATATATATATATATA  1000

seq1  TATATATATATATATA-TATAT--GTATA-CATACA-TGAGCCTGGTTTT  1041
      |||||||||||||||| |||||  ||||| ||||||  |||| |||||||
seq2  TATATATATATATATATTATATTGGTATACCATACACGGAGCATGGTTTT  1050