BAC Information

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BAC

Clone NameB6Ng01-175N09
Chromosome3 (Build37)
Map Location 151,264,730 - 151,265,890
singlet/doubletsinglet
Overlap genenone
Upstream geneEltd1
Downstream geneIfi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33, Zzz3, Ak5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175N09.bB6Ng01-175N09.g
ACCGA003536GA003537
length1,169615
definitionB6Ng01-175N09.b B6Ng01-175N09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccttaatgatcaactgtaacctgcaatataagtcaaataaacca
ttttccccaaagttgtttcttcttctaacatttcacagtcatagacataa
agctaacacggttgtatttactgtgcccctttattttgtgtttttattat
tactcctgctctgactttggcatttccttgtctctgaagcaagcacctct
cagaggtctttcttactagtgctcagttgttgtcttactattctgagtaa
tatctagaatatctataatattatcatgtctaaccttaaaacattaaata
ttattagtgtattactcttctcaactaacattgtcttagcatacacaatt
tctctgaactacatggtattgctatgtaagacagccttattttattcctg
aaattacacacaaaaattattttataaaactattatgtttgcatgtttgc
ttacatatttaccaattcatttgctcaccacttcttatacagcagatatt
ttcagagccatttttcttcttcctaaaatgcccatatgatttggaaattt
tcctcatgtggctgtgctgatattaaacatgtactgacatcataatacgt
gtagtcactcatttcagtataagcatgtcaaaatttgcctgcatataaat
tacattagaaaagaattttatcattgaacttctataatattttatcaatt
caatatgaaaatatatatatgaatgagagagactcttatcagatatactt
ttagtgatttaaaagaaacactttaatgctttgagacccaaaacaaagtg
agggatgattgtgttgtgaaactgagagttttctgaaatgacaccatcca
taacataaactatttttattctggttttggttacatagtctcattcaatg
tgaagcctgtgtgttgtcaaggtggtatgctaatgtaatgtgatttctaa
gaccagtaaaacaagctaattttgttggcttttcaataatatttcttgga
tctcagtattgggaaattattttttatctttaagtgaataatataactaa
tagtattcagtagttttaatatgtctccatatacaatacacagagagaat
gcacacccatgtattgatttccaagaaacatgtgtaaagaatgtaattct
gaaccgtggcttgagagtg
gaattcaatccattcgaaatgaggttataatgtatgtgagtgtggcatgt
agaaaaatagtgttatcaatagtttatttagtttatttatatgtctattg
tactcatgtgcatgtgtgagcatacatggcagcatgctaggttgtacatg
tgtgtgtgtctgtctgtatgtgtgtgtgtatgtgtgtatgtatgtgtgat
tccatgtggctttaaaacctttccttgtgccacattgtatgtgtgtttct
ctttccattatctttacgcaagaaatcaccccgcaccctctataataaat
atttccgggacaacttttacctaatgacacttggtgcttgattcatgata
cagtcactatgatcaagcgttatgatccttagcaacttatgaaaaaaaag
tttattttgtcttttcgttaaaaggggaatgaaaccactgtggaggggtt
ggcagtagttgaagataatgaggtgaacggaacagggaacaaactgttct
ctttttcttccccataagtgaattccagagatgagactggaaaagggaga
gtctataaaccctccaaaggattgaacctactgtcttcacatgcatatac
tgtttctttttatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_151264730_151265890
seq2: B6Ng01-175N09.b_48_1216

seq1  GAATTCCCTTAATGATCAACTGTAACCTGCAATATAAGTCAAATAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTAATGATCAACTGTAACCTGCAATATAAGTCAAATAAACCA  50

seq1  TTTTCCCCAAAGTTGTTTCTTCTTCTAACATTTCACAGTCATAGACATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCAAAGTTGTTTCTTCTTCTAACATTTCACAGTCATAGACATAA  100

seq1  AGCTAACACGGTTGTATTTACTGTGCCCCTTTATTTTGTGTTTTTATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACACGGTTGTATTTACTGTGCCCCTTTATTTTGTGTTTTTATTAT  150

seq1  TACTCCTGCTCTGACTTTGGCATTTCCTTGTCTCTGAAGCAAGCACCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTGCTCTGACTTTGGCATTTCCTTGTCTCTGAAGCAAGCACCTCT  200

seq1  CAGAGGTCTTTCTTACTAGTGCTCAGTTGTTGTCTTACTATTCTGAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTCTTTCTTACTAGTGCTCAGTTGTTGTCTTACTATTCTGAGTAA  250

seq1  TATCTAGAATATCTATAATATTATCATGTCTAACCTTAAAACATTAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGAATATCTATAATATTATCATGTCTAACCTTAAAACATTAAATA  300

seq1  TTATTAGTGTATTACTCTTCTCAACTAACATTGTCTTAGCATACACAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTGTATTACTCTTCTCAACTAACATTGTCTTAGCATACACAATT  350

seq1  TCTCTGAACTACATGGTATTGCTATGTAAGACAGCCTTATTTTATTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAACTACATGGTATTGCTATGTAAGACAGCCTTATTTTATTCCTG  400

seq1  AAATTACACACAAAAATTATTTTATAAAACTATTATGTTTGCATGTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACACACAAAAATTATTTTATAAAACTATTATGTTTGCATGTTTGC  450

seq1  TTACATATTTACCAATTCATTTGCTCACCACTTCTTATACAGCAGATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATATTTACCAATTCATTTGCTCACCACTTCTTATACAGCAGATATT  500

seq1  TTCAGAGCCATTTTTCTTCTTCCTAAAATGCCCATATGATTTGGAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGCCATTTTTCTTCTTCCTAAAATGCCCATATGATTTGGAAATTT  550

seq1  TCCTCATGTGGCTGTGCTGATATTAAACATGTACTGACATCATAATACGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATGTGGCTGTGCTGATATTAAACATGTACTGACATCATAATACGT  600

seq1  GTAGTCACTCATTTCAGTATAAGCATGTCAAAATTTGCCTGCATATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCACTCATTTCAGTATAAGCATGTCAAAATTTGCCTGCATATAAAT  650

seq1  TACATTAGAAAAGAATTTTATCATTGAACTTCTATAATATTTTATCAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAGAAAAGAATTTTATCATTGAACTTCTATAATATTTTATCAATT  700

seq1  CAATATGAAAATATATATATGAATGAGAGAGACTCTTATCAGATATACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGAAAATATATATATGAATGAGAGAGACTCTTATCAGATATACTT  750

seq1  TTAGTGATTTAAAAGAAACACTTTAATGCTTTGAGACCCAAAACAAAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGATTTAAAAGAAACACTTTAATGCTTTGAGACCCAAAACAAAGTG  800

seq1  AGGGATGATTGTGTTGTGAAACTGAGAGTTTTCTGAAATGACACCATCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGATTGTGTTGTGAAACTGAGAGTTTTCTGAAATGACACCATCCA  850

seq1  TAACATAAACTATTTTTATTCTGGTTTTGGTTACATAGTCTCATTCAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAAACTATTTTTATTCTGGTTTTGGTTACATAGTCTCATTCAATG  900

seq1  TGAAGCCTGTGTGTTGTCAAGGTGGTATGCTAATGTAATGTGATTTCTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCTGTGTGTTGTCAAGGTGGTATGCTAATGTAATGTGATTTCTAA  950

seq1  GACCAGTAAAACAAGCTAATTTTGTTGGCTTTTCAATAATATTTCTTGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GACCAGTAAAACAAGCTAATTTTGTTGGCTTTTCAATAATATTTCTTGG-  999

seq1  ATCTCAGTAATTGGGAATTA-TTTTTATCTTTAAGTGATTAATATAACTA  1049
      ||||||||| | || ||||| ||||||||||||||||| |||||||||| 
seq2  ATCTCAGTATTGGGAAATTATTTTTTATCTTTAAGTGAATAATATAACT-  1048

seq1  AATAGTATTCAGTAGTTTTAATATGTCTTCATATAC-ATACACAGAGAG-  1097
      |||||||||||||||||||||||||||| ||||||| |||||||||||| 
seq2  AATAGTATTCAGTAGTTTTAATATGTCTCCATATACAATACACAGAGAGA  1098

seq1  ATGCACACACATGTA-TGATT--CAAG-AACATGTG-AAAGAATGGAATT  1142
      |||||||| |||||| |||||  |||| |||||||| |||||||| ||||
seq2  ATGCACACCCATGTATTGATTTCCAAGAAACATGTGTAAAGAATGTAATT  1148

seq1  CTGGACCGTGG--TTAGAGTG  1161
      ||| |||||||  | ||||||
seq2  CTGAACCGTGGCTTGAGAGTG  1169