BAC Information

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BAC

Clone NameB6Ng01-177I15
Chromosome3 (Build37)
Map Location 10,281,633 - 10,282,492
singlet/doubletsinglet
Overlap gene1700008G05Rik
Upstream geneZbtb10, Zfp704, Pag1, LOC621504, Fabp5, LOC100041480, Pmp2, Fabp9, Fabp4
Downstream geneImpa1, Slc10a5, Zfand1, Chmp4c, Snx16, LOC670564, LOC383826, EG667978
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177I15.bB6Ng01-177I15.g
ACCGA004779GA004780
length1,235867
definitionB6Ng01-177I15.b B6Ng01-177I15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaattctgaacatctatgttccaaatgcaagggcacccacatt
cataaaagagactttactaaagctcaaagcacacaatgtacctcacacga
taatagtggcagacttcaacatcccactctcatcaatgggcagatcatgg
aaacacaaactaaacagagacccattgaagctaacagaagttatggacca
aatggatctaacagatatttatagaacatttcatcctaagcaaaagaatg
tatcatctcagtatctcatggtaccttttccaaaattgaccatgtaatca
gtcacaagacaggattcaacagatacaaaccgattaaaataatcacacaa
atcctatcagctcactgtggactaaggctggtcttcaatagcaacaaaaa
caacagaaaacctacatacacatggaagctgaacaatgctctattcaatg
agaacttggtcaaggaagaaataaagaaagaaattaaagactttttagaa
tttaatgaaaatgaaggcacagcatacccaaacaatcaaagcagtgctaa
gaggaaaactcatagctctgagtgcctccaaaaataaactggaaagagca
tacactagtagcttaatagcacagatgaaagctctatttaaaaaaaaaat
gcaaatctaccaagggtgtagaggacagaaaataatagtcacactcaggg
ctgaagtcaaccaagtagaaacaaaaagacctatacaaataatcaccaaa
accaggagctggttctttgagaaaatcaacaagatagataagcccttagc
cagactaaccagaggttacagagatagtatccaaattaacaaaatcagaa
atgaaaagggagatataatctcctcagaaagtgaggaaattaaaaaaaaa
atcatcagatcctactacaaagcctatattcaacaaaactggatgaaatg
gataattttctagacagataccaggaccaagtttaatcaggatcagataa
accatctaaacagtcccatagcccctaaagcatagaaaacagtcatgaaa
tctcccaccagccaggcagtgatgcacatgcctttatccagaacttgtga
ggcagaagcaggtgatttctgagtttgagcagcctgactgtggagcaggt
ccgggcccaatgcacttatggaccttggccaatggccaggccgtgaaacc
cacatgatactgtcttgcccgaagacagttgcgca
gaattccacacatcaaagctatgggtaaggggcagatgtgaaaccagagt
agtctttcccaaatcacacctgcctgatgtccttagtcatcgatgcccat
gaaaatcaccagggtgtttcaaacctcaagtgaaccagactcttttggaa
tgggacgtagcatcagtgtttatgctctctgctgatgccgatgggagcct
ccactgtagccattaaggcaaactcatggcgtagccagacaccacagcga
ctctgtggcagatcccacagaaagggattatagtccgttcacaatcacta
agcagtgagaccacacaatcgaaaatcagcccctcttgggggatggaaat
gggagacagtttgtgaagcagctcggggagagaatcacaatattcctaat
gttggctgagactgatggagtaattgcatgattttctgaaagtggagtaa
aggtacctgtgtttggtgcctgcctggagtctaagattgtgtgagctttc
cctgtcctttctgtgtgtctctttccttcactgtccaggctgaagttaga
tatggtgtggatttgtgtggttcttgtctctttgctataagtctcctata
ggagtgtacacagtctgatatcacttatatcttgcccttaagcacatctg
aaattcaaatgtgctgttaagtagaaaagaagaggtagggaggaggttgg
agggaaagagggctctgaaacatttcattttcacattgaatattctccct
atctgtaagattctccacttattgctcagccacaaatggtatatctaata
tcatccctgttctctccagtgctgaggagaccatctcagaaaaacgggtg
gaaagattgtagaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_10281633_10282492
seq2: B6Ng01-177I15.g_65_931 (reverse)

seq1  GGCTTCTACAATCTTTCCACCCCTTCTTCTGAGATGGTCTCCTCAGCACT  50
      |||||||||||||||||||||| || ||||||||||||||||||||||||
seq2  GGCTTCTACAATCTTTCCACCCGTTTTTCTGAGATGGTCTCCTCAGCACT  50

seq1  GGAGAG-ACA-GGATGATA-TAGATATACCATTTGTGGCTGAGCAATAAG  97
      |||||| ||| |||||||| ||||||||||||||||||||||||||||||
seq2  GGAGAGAACAGGGATGATATTAGATATACCATTTGTGGCTGAGCAATAAG  100

seq1  TGGAGAATCTTACAGATA-GGAG-ATATTCAATGTG-AAATG-AATGTTT  143
      |||||||||||||||||| |||| |||||||||||| ||||| |||||||
seq2  TGGAGAATCTTACAGATAGGGAGAATATTCAATGTGAAAATGAAATGTTT  150

seq1  CAGAGCCCTCTTTCCCTCCAACCTCCTCCCTACCTCTTCTTTTCTACTTA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCCTCTTTCCCTCCAACCTCCTCCCTACCTCTTCTTTTCTACTTA  200

seq1  ACAGCACATTTGAATTTCAGATGTGCTTAAGGGCAAGATATAAGTGATAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACATTTGAATTTCAGATGTGCTTAAGGGCAAGATATAAGTGATAT  250

seq1  CAGACTGTGTACACTCCTATAGGAGACTTATAGCAAAGAGACAAGAACCA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTGTACACTCCTATAGGAGACTTATAGCAAAGAGACAAGAACCA  300

seq1  CACAAATCCACACCATATCTAACTTCAGCCTGGACAGTGAAGGAAAGAGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATCCACACCATATCTAACTTCAGCCTGGACAGTGAAGGAAAGAGA  350

seq1  CACACAGAAAGGACAGGGAAAGCTCACACAATCTTAGACTCCAGGCAGGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAAAGGACAGGGAAAGCTCACACAATCTTAGACTCCAGGCAGGC  400

seq1  ACCAAACACAGGTACCTTTACTCCACTTTCAGAAAATCATGCAATTACTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACACAGGTACCTTTACTCCACTTTCAGAAAATCATGCAATTACTC  450

seq1  CATCAGTCTCAGCCAACATTAGGAATATTGTGATTCTCTCCCCGAGCTGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTCTCAGCCAACATTAGGAATATTGTGATTCTCTCCCCGAGCTGC  500

seq1  TTCACAAACTGTCTCCCATTTCCATCCCCCAAGAGGGGCTGATTTTCGAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAACTGTCTCCCATTTCCATCCCCCAAGAGGGGCTGATTTTCGAT  550

seq1  TGTGTGGTCTCACTGCTTAGTGATTGTGAACGGACTATAATCCCTTTCTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGTCTCACTGCTTAGTGATTGTGAACGGACTATAATCCCTTTCTG  600

seq1  TGGGATCTGCCACAGAGTCGCTGTGGTGTCTGGCTACGCCATGAGTTTGC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATCTGCCACAGAGTCGCTGTGGTGTCTGGCTACGCCATGAGTTTGC  650

seq1  CTTAATGGCTACAGTGGAGGCTCCCATCGGCATCAGCAGAGAGCATAAAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGGCTACAGTGGAGGCTCCCATCGGCATCAGCAGAGAGCATAAAC  700

seq1  ACTGATGCTACGTCCCATTCCAAAAGAGTCTGGTTCACTTGAGGTTTGAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGCTACGTCCCATTCCAAAAGAGTCTGGTTCACTTGAGGTTTGAA  750

seq1  ACACCCTGGTGATTTTCATGGGCATCGATGACTAAGGACATCAGGCAGGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTGGTGATTTTCATGGGCATCGATGACTAAGGACATCAGGCAGGT  800

seq1  GTGATTTGGGAAAGACTACTCTGGTTTCACATCTGCCCCTTACCCATAGC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTGGGAAAGACTACTCTGGTTTCACATCTGCCCCTTACCCATAGC  850

seq1  TTTGATGTGTGGAATTC  860
      |||||||||||||||||
seq2  TTTGATGTGTGGAATTC  867