BAC Information

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BAC

Clone NameB6Ng01-177K13
Chromosome3 (Build37)
Map Location 119,113,447 - 119,114,540
singlet/doubletsinglet
Overlap geneDpyd
Upstream genenone
Downstream geneLOC100043275, LOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177K13.bB6Ng01-177K13.g
ACCGA004866GA004867
length8841,075
definitionB6Ng01-177K13.b B6Ng01-177K13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttagcatggtattgtatgttgtcaaa
ggctttttcaaaatctaatgagatgattatgtgattttcttacttgagtt
tgtttatatagtagattatgttgatggatttccatatatagaagcatcca
tgcattcttgagatgaagcctacttgttcatggtgaatgatagttttgat
gtgttcttggatttgatttttgagaactttattgagtatttttttgcatt
atattcataagtgaaatttgtctaaagttctctttctttgttgggtcttt
gtgtggtttagatatcagtataattgtggctttataaaaagaattgggta
gtgttccttccttttctcttttgtggaatagtttgaaaatctaaaagttt
tgatatcagttattttttgaaagtatgatagaattctgcactaacccatc
tggctctgggcttttttttgggttgggagacttcactgactgcttctatt
tcctttggggttatgagagtgtttagataatttacatgctcttgatttaa
gtttgatacctggtatctgtctagaaaatcatccattttatctaaatttt
ccagttttgttgagtataggcttttgtagtaggatatgatgacattttga
atttccacagtttctgtcattatgtctcccttttcatttctgatttgtta
attttgataccgtctttgtgccctttagttaatttggctaagggttcatc
tatctgattttctcaaagaaccagctcttaatgttgctgattctttgtat
atttctcttgtttctaattggttgatgtcagccctgtgttttatttcttg
ctgctacttcttcttgggtatactttgcctcttt

gaattctttttacattaaagtggctttcctacgggataagttctgagggc
tgctttgagactcttacttgtttatgattttaataagccagcatcgctta
tattacaggaaaatagatagaaattattctaccctccgtcatatcatttc
atgttactgtaagcattaaatgttgtaatttggaaaagtgctaagatata
gagatgaagtacataattctaatccaattgggtataaattaatttggcat
tgacttccattttccatttacttgacttcttgacataattatagtgcgtt
gatcgtcagagtaacaagcttagatgtatttccacataaatatgttcttt
gctaatataaatatacagtggaaggctacagtctggtcttccttgattgg
gtgacgtgtcctcctccaccaaggctactcttacaatctccaaagagctc
atgcccctttatgcaagctggagagtgaaggctggtacgatgaaacaagt
gtgattctttttctactgctgggtcagagaccaggatgaccttgcaagag
ctgttcttttccaaatccctatctagaaaaatgggtttcattgtgcagga
ggaagagcatgtgttttcagtggtgtaaaagccacggcaactccagttta
cagtctgctgtggaacatttggaattcagtggtgtctgtcatcagtggga
tgtgtcagtgaatgtgcagatcaaaggttccagaaaggggaaagacactg
tgaagaggagatattgtgggatatgaatggtatgagggcattctttgttg
taaacttaaaaccacttagcatttttccacggcacctaggtttcttccta
aatgaactttgtaaagtacatttgaataaccttgagatttaaagcctcac
tatgcttccgaatactgatgaagttgttaagcgttgggatataacccttt
gccttcgttctatttttggcctccatccacgcaaataaggttattgctgg
ccagaggaatcatattttggcatttgcctttcaactctcagtagtgcaac
acattagttcaatcttaaagaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119113447_119114540
seq2: B6Ng01-177K13.g_64_1138

seq1  GAATTCTTTTTACATTAAAGTGGCTTTCCTACGGGATAAGTTCTGAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTACATTAAAGTGGCTTTCCTACGGGATAAGTTCTGAGGGC  50

seq1  TGCTTTGAGACTCTTACTTGTTTATGATTTTAATAAGCCAGCATCGCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAGACTCTTACTTGTTTATGATTTTAATAAGCCAGCATCGCTTA  100

seq1  TATTACAGGAAAATAGATAGAAATTATTCTACCCTCCGTCATATCATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAGGAAAATAGATAGAAATTATTCTACCCTCCGTCATATCATTTC  150

seq1  ATGTTACTGTAAGCATTAAATGTTGTAATTTGGAAAAGTGCTAAGATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACTGTAAGCATTAAATGTTGTAATTTGGAAAAGTGCTAAGATATA  200

seq1  GAGATGAAGTACATAATTCTAATCCAATTGGGTATAAATTAATTTGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAAGTACATAATTCTAATCCAATTGGGTATAAATTAATTTGGCAT  250

seq1  TGACTTCCATTTTCCATTTACTTGACTTCTTGACATAATTATAGTGCGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCCATTTTCCATTTACTTGACTTCTTGACATAATTATAGTGCGTT  300

seq1  GATCGTCAGAGTAACAAGCTTAGATGTATTTCCACATAAATATGTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGTCAGAGTAACAAGCTTAGATGTATTTCCACATAAATATGTTCTTT  350

seq1  GCTAATATAAATATACAGTGGAAGGCTACAGTCTGGTCTTCCTTGATTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATAAATATACAGTGGAAGGCTACAGTCTGGTCTTCCTTGATTGG  400

seq1  GTGACGTGTCCTCCTCCACCAAGGCTACTCTTACAATCTCCAAAGAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGTGTCCTCCTCCACCAAGGCTACTCTTACAATCTCCAAAGAGCTC  450

seq1  ATGCCCCTTTATGCAAGCTGGAGAGTGAAGGCTGGTACGATGAAACAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCTTTATGCAAGCTGGAGAGTGAAGGCTGGTACGATGAAACAAGT  500

seq1  GTGATTCTTTTTCTACTGCTGGGTCAGAGACCAGGATGACCTTGCAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCTTTTTCTACTGCTGGGTCAGAGACCAGGATGACCTTGCAAGAG  550

seq1  CTGTTCTTTTCCAAATCCCTATCTAGAAAAATGGGTTTCATTGTGCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTTTCCAAATCCCTATCTAGAAAAATGGGTTTCATTGTGCAGGA  600

seq1  GGAAGAGCATGTGTTTTCAGTGGTGTAAAAGCCACGGCAACTCCAGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCATGTGTTTTCAGTGGTGTAAAAGCCACGGCAACTCCAGTTTA  650

seq1  CAGTCTGCTGTGGAACATTTGGAATTCAGTGGTGTCTGTCATCAGTGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGCTGTGGAACATTTGGAATTCAGTGGTGTCTGTCATCAGTGGGA  700

seq1  TGTGTCAGTGAATGTGCAGATCAAAGGTTCCAGAAAGGGGAAAGACACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAGTGAATGTGCAGATCAAAGGTTCCAGAAAGGGGAAAGACACTG  750

seq1  TGAAGAGGAGATAATTGTGGGATAATGAATGGTATGAGGGCA-TCTTTGT  799
      |||||||||||| |||||||||| |||||||||||||||||| |||||||
seq2  TGAAGAGGAGAT-ATTGTGGGAT-ATGAATGGTATGAGGGCATTCTTTGT  798

seq1  GTTAAACTTAAAACCACTTAGCATTTTTCCACGGCACCTAGGTTTCTTCC  849
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACTTAAAACCACTTAGCATTTTTCCACGGCACCTAGGTTTCTTCC  848

seq1  TAAATGAACTTTGTAAAGTACAATTGAATAACCTTGAGATTTAAAGCCTC  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TAAATGAACTTTGTAAAGTACATTTGAATAACCTTGAGATTTAAAGCCTC  898

seq1  ACTATGCTTCGGAATACTGATGAAGTTTGTTTAAGCGTTGTGATAT-ACC  948
      |||||||||| ||||||||||||||||   |||||||||| ||||| |||
seq2  ACTATGCTTCCGAATACTGATGAAGTT--GTTAAGCGTTGGGATATAACC  946

seq1  CTTTGCCTTTCGTTTCTATTTTTTGCCTCC-TTCACGCAAAATAAAGTTT  997
      ||||||| |||| |||||||||| |||||| | ||||| |||||| ||| 
seq2  CTTTGCC-TTCG-TTCTATTTTTGGCCTCCATCCACGC-AAATAAGGTT-  992

seq1  ATTTGCTGTGCAGAGGAATCAATATTTTTGCCATTTTGCTTTTTCAACTC  1047
        ||||||  |||||||||| ||||||| ||   |||||  |||||||||
seq2  -ATTGCTGGCCAGAGGAATC-ATATTTTGGC--ATTTGC-CTTTCAACTC  1037

seq1  TTCCAGTAAGTTGCAATCAACATTAGTTACAATCTTTAAAGAGATGC  1094
      |  |||||   |||||   ||||||||| ||||| ||||||| ||||
seq2  T--CAGTA--GTGCAA--CACATTAGTT-CAATC-TTAAAGA-ATGC  1075


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