BAC Information

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BAC

Clone NameB6Ng01-178C01
Chromosome3 (Build37)
Map Location 79,685,803 - 79,686,575
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144
Downstream gene1110032E23Rik, EG626797, Gria2, Glrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178C01.bB6Ng01-178C01.g
ACCGA005205GA005206
length7731,183
definitionB6Ng01-178C01.b B6Ng01-178C01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatgtggcaagcaggagaaaggctgcagttgaattgagcttcc
agtgaagtggtgcatcctgtcaggagtaccactgtgtgccctgtggactc
aaactccccaaccttctgaaagctattggcaaaataatttatagggactc
tcactgaaagttcactcactaactcttcccttttctttgttgacccttgc
ttgttacatgttacatatccaagaatgggcattctgagatgaagtgtggg
tcaccacatgaagggaatttaccatgtagaccaagggtgctgatggagac
tgttgaatcacatcccttatgagacagggctaaggaagccagtttgctgg
tcatctgacatgctgcttgagagaacaattaggagaggtgaagtgtaatg
actagtgtgtaatggtggaatgatggatttcagagtctgaggagacatca
atagccagctggagagatgctgtgatattggcccctttgaagagattgta
agatgctccttggagggcacatataccccatgcccagggacctgctcagt
agattcacaatagtttcaaaggggagattttctgctctccccctagtcta
tcgaacactgggttacctggagccaggcttagcattcggtgaggaggtag
aaaagcccagaatggatttattatacaggaaacacacaaacaagcaaaca
aacaccatgggtcaccttgcttttctgttttagtagtttttcgtgtgtgt
gtgtgtgtgtgtgtgtgtgtggg
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcacggaaacgaaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaacctggtacaaccattctggaaattagtcttgcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatacccagaagatgttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagctcagaaac
ttagaatacccaagatacaagatataatttgcaaaacacatgaaattgaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagaatttgga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagata
aaaggatggaccatctagagactgccacacctggggatccatcccataat
cagcctccaaacgctgacaccattacatacgccagcaagattttgctgta
aagaccctgatatagctgtctggcaaacacataagtagatgctcacagtc
agctattggatggatcacagggtccccaatgtaggcgctagaaaaagtac
ccaaggagctaaaggagtctgcaaccctatagtggaacacaatatgaact
aaccagtacccccagagctcgtgtctctagctgcatatgtagtaggagat
gcctgtcagaacaacgttggaagagagccctctctgcaactttattatgc
tcagtataggaatgccaaggcagagttagatgggtgcttacgggagattg
gggggatagactttgctgatcgtagctgcgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79685803_79686575
seq2: B6Ng01-178C01.b_45_817

seq1  GAATTCCCATGTGGCAAGCAGGAGAAAGGCTGCAGTTGAATTGAGCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGTGGCAAGCAGGAGAAAGGCTGCAGTTGAATTGAGCTTCC  50

seq1  AGTGAAGTGGTGCATCCTGTCAGGAGTACCACTGTGTGCCCTGTGGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGTGGTGCATCCTGTCAGGAGTACCACTGTGTGCCCTGTGGACTC  100

seq1  AAACTCCCCAACCTTCTGAAAGCTATTGGCAAAATAATTTATAGGGACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCCCAACCTTCTGAAAGCTATTGGCAAAATAATTTATAGGGACTC  150

seq1  TCACTGAAAGTTCACTCACTAACTCTTCCCTTTTCTTTGTTGACCCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAAAGTTCACTCACTAACTCTTCCCTTTTCTTTGTTGACCCTTGC  200

seq1  TTGTTACATGTTACATATCCAAGAATGGGCATTCTGAGATGAAGTGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACATGTTACATATCCAAGAATGGGCATTCTGAGATGAAGTGTGGG  250

seq1  TCACCACATGAAGGGAATTTACCATGTAGACCAAGGGTGCTGATGGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACATGAAGGGAATTTACCATGTAGACCAAGGGTGCTGATGGAGAC  300

seq1  TGTTGAATCACATCCCTTATGAGACAGGGCTAAGGAAGCCAGTTTGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAATCACATCCCTTATGAGACAGGGCTAAGGAAGCCAGTTTGCTGG  350

seq1  TCATCTGACATGCTGCTTGAGAGAACAATTAGGAGAGGTGAAGTGTAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGACATGCTGCTTGAGAGAACAATTAGGAGAGGTGAAGTGTAATG  400

seq1  ACTAGTGTGTAATGGTGGAATGATGGATTTCAGAGTCTGAGGAGACATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGTGTAATGGTGGAATGATGGATTTCAGAGTCTGAGGAGACATCA  450

seq1  ATAGCCAGCTGGAGAGATGCTGTGATATTGGCCCCTTTGAAGAGATTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAGCTGGAGAGATGCTGTGATATTGGCCCCTTTGAAGAGATTGTA  500

seq1  AGATGCTCCTTGGAGGGCACATATACCCCATGCCCAGGGACCTGCTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTCCTTGGAGGGCACATATACCCCATGCCCAGGGACCTGCTCAGT  550

seq1  AGATTCACAATAGTTTCAAAGGGGAGATTTTCTGCTCTCCCCCTAGTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCACAATAGTTTCAAAGGGGAGATTTTCTGCTCTCCCCCTAGTCTA  600

seq1  TCGAACACTGGGTTACCTGGAGCCAGGCTTAGCATTCGGTGAGGAGGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACACTGGGTTACCTGGAGCCAGGCTTAGCATTCGGTGAGGAGGTAG  650

seq1  AAAAGCCCAGAATGGATTTATTATACAGGAAACACACAAACAAGCAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCCAGAATGGATTTATTATACAGGAAACACACAAACAAGCAAACA  700

seq1  AACACCATGGGTCACCTTGCTTTTCTGTTTTAGTAGTTTTTCGTGTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATGGGTCACCTTGCTTTTCTGTTTTAGTAGTTTTTCGTGTGTGT  750

seq1  GTGTGTGTGTGTGTGTGTGTGTG  773
      ||||||||||||||||||||| |
seq2  GTGTGTGTGTGTGTGTGTGTGGG  773