BAC Information

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BAC

Clone NameB6Ng01-178L14
Chromosome3 (Build37)
Map Location 123,094,784 - 123,247,992
singlet/doubletdoublet
Overlap genePrss12, EG668804, Ndst3
Upstream geneBcar3, Fnbp1l, Ppia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2, Sec24d, G430022H21Rik
Downstream geneLOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178L14.bB6Ng01-178L14.g
ACCGA005631GA005632
length1,0111,160
definitionB6Ng01-178L14.b B6Ng01-178L14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,094,784 - 123,095,526)(123,246,844 - 123,247,992)
sequence
gaattcttttttctaaattggttcaccaaaagggaataatacagaaagag
ggcttatagttttgttcatattaatgtccttgatgcaaattatagtatga
gatcaaaataagaacttcagagtccatagtgtaggctaattcctggattt
ctcataattcactttgtgtagcttttcactagttttaagaaaatatttac
tgtatatttcatgtatgtatgggcgtgagtgtaatgtgtatgcatgtgtg
ggtttgtacatctatgaagagatcaaagaatggtgtaggatattatgctg
tatagctttccaccttactctgttgagacaggatctcattgaactcagaa
caatgtgttgggcagccaatcccaatgatcctgtctctgcccatttccca
gtgctggaatagcaggcatacagggctatgcacagcttcttaggtgcatg
ctgggatttgaacccaggtaccttgctagcttttatagtgctagaaggtg
ctatatacactagtagaagagaaaaagatccacaaatcttacccatctgt
gagccctgtgagccacaacaatgaccagaccagcaagacatgcccactgg
tgcagtagtgacacaaatgtcatggaagtaaacagccacttgctaattta
atttaaatccacactacaagtaaaaacctatagcttgtactagtatcata
gccaagagcctgtggctagattggtcacagaccctagatgagaacctact
actattactctgctaaaaggacatagtattaaacggactcctgatgacta
atcgttatactcacagataagtgtgtctttcaaccctcatgagaaaggct
tcttttttgcagtgggatagcaaataacacagaggacccacaagtggtca
gtgtgcagagaataagagtatcaatttgctcaggccctaaaaatagaaca
tctctaatcactctccctctcccagggcttagtgattctgggaagaacgg
ggtgcaggaaa
gaattccaggacagccagggctatacagaaaaaccctgtctcgaaaaaaa
aaaatatatatatatatatattttaatttaataattccatgcaatatatt
ttaattactttcatctcctctctcctcaccctaattccatccatacacac
cctacattagcatccctcttccaactacatgacttttttcttttcctcca
catttaatatcatcaccatcatcaatttctttggtcatttcacccctccc
ccaactcctcccagataaaactcagttccacgaaggatttgagtttgcat
ctgctgttaaattctattccatgacagtttaaaaagtggggaaaaggttt
ctccttcctttcagcaccccttgcaataaagagttggcagaaagacatca
aaacctatgtatgtagtgtaccaaccatatgtggagatgtgttagacact
ctagtttaggggccaaaggatactataactctgaagtttcaagctttcgt
cccaggagtctcttacttgccgttacctgctgggccagttttctatactt
ctagtatggccagttttgtggagttttagttcaacaattgatagacacta
gctttaagtatttaacattcaacttaaccttaaagaaagctgagtgcttt
tagtttgcagctagaaattcaagtccactttctgctttctgctttaagta
tctctttgaaaagaaaagcttttattttctaaacgattttctatttcaag
ttggcctatctttgtgttttttttatagggtttctcgcaaggtattgtgt
ttcagaaagaaaaaaaaaaaaagaagtaaagtagtctataaagacatcat
ttctttttcttgtagagtggtccttgacctgcatgctatgtgtttgttct
ctctgcatcctgctcagcagaagcttttttttattcatctccactgctga
aaaaggcacttgtgaacttgagagacagaccatcaaagaaacacatttat
tatacaaaggaacctggtggggtcactggtgcaccttggaatgtagctag
ctaaataccattatgtggattctctacctgggtcctgccaggtagcaagg
caagaatagcggtatctgtgaagccaggttccaatccaggcagggctgtc
cctctcttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_123094784_123095526
seq2: B6Ng01-178L14.b_43_785

seq1  GAATTCTTTTTTCTAAATTGGTTCACCAAAAGGGAATAATACAGAAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTCTAAATTGGTTCACCAAAAGGGAATAATACAGAAAGAG  50

seq1  GGCTTATAGTTTTGTTCATATTAATGTCCTTGATGCAAATTATAGTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATAGTTTTGTTCATATTAATGTCCTTGATGCAAATTATAGTATGA  100

seq1  GATCAAAATAAGAACTTCAGAGTCCATAGTGTAGGCTAATTCCTGGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAATAAGAACTTCAGAGTCCATAGTGTAGGCTAATTCCTGGATTT  150

seq1  CTCATAATTCACTTTGTGTAGCTTTTCACTAGTTTTAAGAAAATATTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAATTCACTTTGTGTAGCTTTTCACTAGTTTTAAGAAAATATTTAC  200

seq1  TGTATATTTCATGTATGTATGGGCGTGAGTGTAATGTGTATGCATGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTTCATGTATGTATGGGCGTGAGTGTAATGTGTATGCATGTGTG  250

seq1  GGTTTGTACATCTATGAAGAGATCAAAGAATGGTGTAGGATATTATGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTACATCTATGAAGAGATCAAAGAATGGTGTAGGATATTATGCTG  300

seq1  TATAGCTTTCCACCTTACTCTGTTGAGACAGGATCTCATTGAACTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTTCCACCTTACTCTGTTGAGACAGGATCTCATTGAACTCAGAA  350

seq1  CAATGTGTTGGGCAGCCAATCCCAATGATCCTGTCTCTGCCCATTTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGTTGGGCAGCCAATCCCAATGATCCTGTCTCTGCCCATTTCCCA  400

seq1  GTGCTGGAATAGCAGGCATACAGGGCTATGCACAGCTTCTTAGGTGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGAATAGCAGGCATACAGGGCTATGCACAGCTTCTTAGGTGCATG  450

seq1  CTGGGATTTGAACCCAGGTACCTTGCTAGCTTTTATAGTGCTAGAAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTTGAACCCAGGTACCTTGCTAGCTTTTATAGTGCTAGAAGGTG  500

seq1  CTATATACACTAGTAGAAGAGAAAAAGATCCACAAATCTTACCCATCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATACACTAGTAGAAGAGAAAAAGATCCACAAATCTTACCCATCTGT  550

seq1  GAGCCCTGTGAGCCACAACAATGACCAGACCAGCAAGACATGCCCACTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTGTGAGCCACAACAATGACCAGACCAGCAAGACATGCCCACTGG  600

seq1  TGCAGTAGTGACACAAATGTCATGGAAGTAAACAGCCACTTGCTAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTAGTGACACAAATGTCATGGAAGTAAACAGCCACTTGCTAATTTA  650

seq1  ATTTAAATCCACACTACAAGTAAAAACCTATAGCTTGTACTAGTATCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATCCACACTACAAGTAAAAACCTATAGCTTGTACTAGTATCATA  700

seq1  GCCAAGAGCCTGTGGCTAGATTGGTCACAGACCCTAGATGAGA  743
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAGCCTGTGGCTAGATTGGTCACAGACCCTAGATGAGA  743

seq1: chr3_123246844_123247992
seq2: B6Ng01-178L14.g_67_1226 (reverse)

seq1  ACAAGAGAGGG-CAGCCCTG-CTGGATGTGAAACTGCTTTCACAGATTAC  48
      ||||||||||| |||||||| ||||||  ||| |||  |||||||| |||
seq2  ACAAGAGAGGGACAGCCCTGCCTGGATTGGAACCTGGCTTCACAGA-TAC  49

seq1  CGCTA-TCTTGCCCTGCTA-CTTGCAGGA-CCAGGTAAGAGAAT-CACAT  94
      ||||| ||||||| ||||| || |||||| |||||| ||||||| |||||
seq2  CGCTATTCTTGCCTTGCTACCTGGCAGGACCCAGGT-AGAGAATCCACAT  98

seq1  AATGGGTAATTTTAGCTAGCTACATTCC-AGGTGCA-CAGTGACCC--AC  140
      ||| ||||  |||||||||||||||||| ||||||| |||||||||   |
seq2  AAT-GGTA--TTTAGCTAGCTACATTCCAAGGTGCACCAGTGACCCCACC  145

seq1  AG--TTCTTTGTATA--TAGTGTGTTTCTTTGATGGTCTGTCTCTCAAGT  186
      ||  | |||||||||   | ||||||||||||||||||||||||||||||
seq2  AGGTTCCTTTGTATAATAAATGTGTTTCTTTGATGGTCTGTCTCTCAAGT  195

seq1  TCAC-AGTGCCTTTTTCAGCAGTGGAGATGAATAAAAAAAGCTTTCTGCT  235
      |||| |||||||||||||||||||||||||||||||||||   |||||||
seq2  TCACAAGTGCCTTTTTCAGCAGTGGAGATGAATAAAAAAAAGCTTCTGCT  245

seq1  GAGCAGGATGCAGAGAGGACAAACACATAGCATGCAGGTCAAGGACCACT  285
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAGCAGGATGCAGAGAGAACAAACACATAGCATGCAGGTCAAGGACCACT  295

seq1  CTACAAGAAAAAGAAATGATGTCTTTATAGACTACTTTACTTC-TTTTTT  334
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTACAAGAAAAAGAAATGATGTCTTTATAGACTACTTTACTTCTTTTTTT  345

seq1  TTTTTTCTTTCTGAAACACAATACCTTGCGAGAAACCCTATAAAAAAAAC  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTCTGAAACACAATACCTTGCGAGAAACCCTATAAAAAAAAC  395

seq1  ACAAAGATAGGCCAACTTGAAATAGAAAATCGTTTAGAAAATAAAAGCTT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATAGGCCAACTTGAAATAGAAAATCGTTTAGAAAATAAAAGCTT  445

seq1  TTCTTTTCAAAGAGATACTTAAAGCAGAAAGCAGAAAGTGGACTTGAATT  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCAAAGAGATACTTAAAGCAGAAAGCAGAAAGTGGACTTGAATT  495

seq1  TCTAGCTGCAAACTAAAAGCACTCAGCTTTCTTTAAGGTTAAGTTGAATG  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTGCAAACTAAAAGCACTCAGCTTTCTTTAAGGTTAAGTTGAATG  545

seq1  TTAAATACTTAAAGCTAGTGTCTATCAATTGTTGAACTAAAACTCCACAA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATACTTAAAGCTAGTGTCTATCAATTGTTGAACTAAAACTCCACAA  595

seq1  AACTGGCCATACTAGAAGTATAGAAAACTGGCCCAGCAGGTAACGGCAAG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCCATACTAGAAGTATAGAAAACTGGCCCAGCAGGTAACGGCAAG  645

seq1  TAAGAGACTCCTGGGACGAAAGCTTGAAACTTCAGAGTTATAGTATCCTT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGACTCCTGGGACGAAAGCTTGAAACTTCAGAGTTATAGTATCCTT  695

seq1  TGGCCCCTAAACTAGAGTGTCTAACACATCTCCACATATGGTTGGTACAC  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCTAAACTAGAGTGTCTAACACATCTCCACATATGGTTGGTACAC  745

seq1  TACATACATAGGTTTTGATGTCTTTCTGCCAACTCTTTATTGCAAGGGGT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACATAGGTTTTGATGTCTTTCTGCCAACTCTTTATTGCAAGGGGT  795

seq1  GCTGAAAGGAAGGAGAAACCTTTTCCCCACTTTTTAAACTGTCATGGAAT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGGAAGGAGAAACCTTTTCCCCACTTTTTAAACTGTCATGGAAT  845

seq1  AGAATTTAACAGCAGATGCAAACTCAAATCCTTCGTGGAACTGAGTTTTA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAACAGCAGATGCAAACTCAAATCCTTCGTGGAACTGAGTTTTA  895

seq1  TCTGGGAGGAGTTGGGGGAGGGGTGAAATGACCAAAGAAATTGATGATGG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAGGAGTTGGGGGAGGGGTGAAATGACCAAAGAAATTGATGATGG  945

seq1  TGATGATATTAAATGTGGAGGAAAAGAAAAAAGTCATGTAGTTGGAAGAG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATATTAAATGTGGAGGAAAAGAAAAAAGTCATGTAGTTGGAAGAG  995

seq1  GGATGCTAATGTAGGGTGTGTATGGATGGAATTAGGGTGAGGAGAGAGGA  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTAATGTAGGGTGTGTATGGATGGAATTAGGGTGAGGAGAGAGGA  1045

seq1  GATGAAAGTAATTAAAATATATTGCATGGAATTATTAAATTAAAATATAT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAGTAATTAAAATATATTGCATGGAATTATTAAATTAAAATATAT  1095

seq1  ATATATATATATTTTTTTTTTTCGAGACAGGGTTTTTCTGTATAGCCCTG  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATTTTTTTTTTTCGAGACAGGGTTTTTCTGTATAGCCCTG  1145

seq1  GCTGTCCTGGAATTC  1149
      |||||||||||||||
seq2  GCTGTCCTGGAATTC  1160