BAC Information

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BAC

Clone NameB6Ng01-179F02
Chromosome3 (Build37)
Map Location 32,871,643 - 32,872,335
singlet/doubletsinglet
Overlap genePex2
Upstream geneKcnmb2, LOC665514, Zmat3, 4930429B21Rik, Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5, Usp13
Downstream geneEG545512, LOC100041058, Ttc14, Ccdc39
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179F02.bB6Ng01-179F02.g
ACCGA006071GA006072
length635699
definitionB6Ng01-179F02.b B6Ng01-179F02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagaaagtctttcatttctttatttcttccctagcccagtggtc
attgtaggttttctgttgtttctatcattgttgaattctacctttaatct
atgatggtctgataagatataaggggttatttcaattttgttgtatctgt
tgagactggctttgtgactgactactagatggtcagttttcgagtatgtt
ctgtgaggtgctgagaagaaggttgactcttttgtgtttgggtgaaatgt
tctgtagatatctgttaggtacattagatttataatgtcagttattttca
ttatatttcggttttagtttttgtcttgatgacctgtccattggtaagag
tgaggtgttgaagtccaccactattaatttttaggttcaatgtgtgattt
aagctttagtagagtttcttttatgaatgtgggtgcccttacatttgggg
catagatgttcataattgagatgtcattttggtggacttttcctttgatg
ggtattaagtgtccttccccatctttttaaaattaaatttagtggaaaat
ctatcttattagatgttggaatggttattccagcttgctctcagatcttg
tttgcttggaaaacatttttcccagcactttactt
gaattcctgagctaagagcaactttggatcagatcagatcttctatgctt
cctcctgtggctctgagcactgcagaacaagacccacaacaatgagggta
ggacaaagacctcagccttgcatcattgactgggcttcttaaatgttcaa
tataaccacatgccctcatgttctcctttcatggatctctcataaactct
tacttggaatgcccagaagtagttacagtgagaaagtcaccaatgctggt
ccttccaggaagatttgggaggtaggggatagaactcaagatcgttacag
ctcatccttctactgtgtggcccaaatctggtctttgagaagcatgtgct
caggcattctcctcacaggaatgctctctgaatttagtgctttcataagg
attgtaataagtagaatactggaaagccaagtacaagtagatagatagat
agatagatagatagatagatagatagatagatagatagatatgtctacat
acctagtcatatatgtatatgcatatatatacatatatatatgaataact
aggtgagtagagagatagacagattttaagcacatattttacatatcatg
catgcacacctattgtttcttgtttttgcttttttctctaattcttttta
gaactctcagtcataaaataaaaatttttcttttttagtttttccatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_32871643_32872335
seq2: B6Ng01-179F02.g_70_768 (reverse)

seq1  TGATGG-AATACTAAAAAGG---AACTTTTATTTT-TGACTGAG-GTTCT  44
      |||||| || |||||||| |   || ||||||||| |||||||| |||||
seq2  TGATGGAAAAACTAAAAAAGAAAAATTTTTATTTTATGACTGAGAGTTCT  50

seq1  -AAAAGAATTAGAGAAAAAAGCAAAAACAAAGAAACAATAGGTGTGCATG  93
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAAAAGAATTAGAGAAAAAAGCAAAAAC-AAGAAACAATAGGTGTGCATG  99

seq1  CATGATATGTAAAATATGTGCTTAAAATCTGTCTATCTCTCTACTCACCT  143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATATGTAAAATATGTGCTTAAAATCTGTCTATCTCTCTACTCACCT  149

seq1  AGTTATTCATATATATATGTATATATATGCATATACATATATGACTAGGT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTCATATATATATGTATATATATGCATATACATATATGACTAGGT  199

seq1  ATGTAGACATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGACATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT  249

seq1  ATCTATCTATCTACTTGTACTTGGCTTTCCAGTATTCTACTTATTACAAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTACTTGTACTTGGCTTTCCAGTATTCTACTTATTACAAT  299

seq1  CCTTATGAAAGCACTAAATTCAGAGAGCATTCCTGTGAGGAGAATGCCTG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGAAAGCACTAAATTCAGAGAGCATTCCTGTGAGGAGAATGCCTG  349

seq1  AGCACATGCTTCTCAAAGACCAGATTTGGGCCACACAGTAGAAGGATGAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATGCTTCTCAAAGACCAGATTTGGGCCACACAGTAGAAGGATGAG  399

seq1  CTGTAACGATCTTGAGTTCTATCCCCTACCTCCCAAATCTTCCTGGAAGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACGATCTTGAGTTCTATCCCCTACCTCCCAAATCTTCCTGGAAGG  449

seq1  ACCAGCATTGGTGACTTTCTCACTGTAACTACTTCTGGGCATTCCAAGTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCATTGGTGACTTTCTCACTGTAACTACTTCTGGGCATTCCAAGTA  499

seq1  AGAGTTTATGAGAGATCCATGAAAGGAGAACATGAGGGCATGTGGTTATA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTATGAGAGATCCATGAAAGGAGAACATGAGGGCATGTGGTTATA  549

seq1  TTGAACATTTAAGAAGCCCAGTCAATGATGCAAGGCTGAGGTCTTTGTCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATTTAAGAAGCCCAGTCAATGATGCAAGGCTGAGGTCTTTGTCC  599

seq1  TACCCTCATTGTTGTGGGTCTTGTTCTGCAGTGCTCAGAGCCACAGGAGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCATTGTTGTGGGTCTTGTTCTGCAGTGCTCAGAGCCACAGGAGG  649

seq1  AAGCATAGAAGATCTGATCTGATCCAAAGTTGCTCTTAGCTCAGGAATTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAGAAGATCTGATCTGATCCAAAGTTGCTCTTAGCTCAGGAATTC  699