BAC Information

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BAC

Clone NameB6Ng01-179J24
Chromosome3 (Build37)
Map Location 74,177,323 - 74,178,205
singlet/doubletsinglet
Overlap genenone
Upstream geneBche, LOC667425, LOC619764, LOC667434
Downstream geneLOC100041551, EG667459, BC050789, Serpini2, Wdr49
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179J24.bB6Ng01-179J24.g
ACCGA006295GA006296
length1,198888
definitionB6Ng01-179J24.b B6Ng01-179J24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacataaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaatttgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gattgtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaatcaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacagataatataaaatatcttggcg
tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatat
ctgaagaaagaaattaaagatctcagaagatggaatgatctcccatgctc
atggattggcaggataaacattgtaaaaatggctatcttgccaaaagcaa
tctacagattcaatgcaatccccatcaaaatttcaactcaattcttcaac
gaattagaaggagcaatttgcaaattcatctggaataacaaaaaacctag
gattgcaaaaagtcttctcaaggataaaagaacctctggtggaatcacta
tgcctgacctaaagctttactacagagcaattgtgataaaaactgcatgg
tgctggtatagagacatacaagtagaccaatggaaatggaattgaagacc
cagaaatgaacccacacacctatggtctctttgatctttgacaagggagc
taaaaccatccagtggaagaaagacagcattttcaacaattgggtgctgg
cacactgggttgttatcatgtagaaggatgtgaatcgattccatacttat
ctcctttgtacttaaggttcaaattctaagttggaatcaagggaactttc
acattaaacccagggattaacatttgaaaaggtaataagaaaatattcta
attcaaatattaaatagctttataacttgtgactcactcttgcagccata
ctctgttcacatgggatgttgtctagaaactggtcccccaatatccag
gaattctatcttttgtactttattagtaagatttaactatgtagtttttg
tcttatttcatagagttttcatttccttcactgtttgcttgtgttttcat
agactttattaatggattcattcatatcctcattaaggtccttgaatata
ttcataatggctattttgatatccttgtctatattacatttttcatacat
atattgtcctggttgatattcattatgcttttacacatgaattaagtagg
aatctgggtttgctatggtttaattctaggtactaatatttatgtttgtc
tttttgtaatggttttaaattttttgttttgttgttgctgtccagtttgg
accttagaagtgtgtgcaggctgtgattttcttcattgcaagtgcttcta
atcatctgccaggtttgtacactggttgtcccgcctagaatttgtttcta
cataatgagaagaatgaatgaggttggctataaatgttcagggtgggatg
actaagaggatccacatgaaggagaaatctgagtccattattaatatctg
ttacatctcagggaatggaggtacaaggcaagaaaactggtgctggtagt
ctgctatagggctataaaggagactggtgaattggagttggaatatggga
agtagtatgccactttctaggaaggatgtgtggtcagagggtttccaagg
agtgatgcctctagtactgacagtggaaacaaagtgatgagatgaggata
aaaatctgtaagagaccctacagagtccctcagggaatagagaaagaact
aatacaacacacacacacatatgcattatattaaacatacatatgtgtat
atgtatatatatatatatatatatatatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_74177323_74178205
seq2: B6Ng01-179J24.g_67_954 (reverse)

seq1  ATATATATATATATATATATATATATATATATATACATATACACATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATACATATACACATATGT  50

seq1  ATGTTT-ATAT-ATGCATATGTGTGTGTGTG-TGTATTAGTTCTTTCTCT  97
      |||||| |||| ||||||||||||||||||| ||||||||||||||||||
seq2  ATGTTTAATATAATGCATATGTGTGTGTGTGTTGTATTAGTTCTTTCTCT  100

seq1  ATTCCCTG-GGGACTCTGTA-GGTCTCTTACAGATTTTTATCCTCATCTC  145
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  ATTCCCTGAGGGACTCTGTAGGGTCTCTTACAGATTTTTATCCTCATCTC  150

seq1  ATCACTTTGTTTCCACTGTCAGTACTAGAGGCATCACTCCTTGGAAACCC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTTGTTTCCACTGTCAGTACTAGAGGCATCACTCCTTGGAAACCC  200

seq1  TCTGACCACACATCCTTCCTAGAAAGTGGCATACTACTTCCCATATTCCA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCACACATCCTTCCTAGAAAGTGGCATACTACTTCCCATATTCCA  250

seq1  ACTCCAATTCACCAGTCTCCTTTATAGCCCTATAGCAGACTACCAGCACC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAATTCACCAGTCTCCTTTATAGCCCTATAGCAGACTACCAGCACC  300

seq1  AGTTTTCTTGCCTTGTACCTCCATTCCCTGAGATGTAACAGATATTAATA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTTGCCTTGTACCTCCATTCCCTGAGATGTAACAGATATTAATA  350

seq1  ATGGACTCAGATTTCTCCTTCATGTGGATCCTCTTAGTCATCCCACCCTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTCAGATTTCTCCTTCATGTGGATCCTCTTAGTCATCCCACCCTG  400

seq1  AACATTTATAGCCAACCTCATTCATTCTTCTCATTATGTAGAAACAAATT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTATAGCCAACCTCATTCATTCTTCTCATTATGTAGAAACAAATT  450

seq1  CTAGGCGGGACAACCAGTGTACAAACCTGGCAGATGATTAGAAGCACTTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCGGGACAACCAGTGTACAAACCTGGCAGATGATTAGAAGCACTTG  500

seq1  CAATGAAGAAAATCACAGCCTGCACACACTTCTAAGGTCCAAACTGGACA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAGAAAATCACAGCCTGCACACACTTCTAAGGTCCAAACTGGACA  550

seq1  GCAACAACAAAACAAAAAATTTAAAACCATTACAAAAAGACAAACATAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAACAAAACAAAAAATTTAAAACCATTACAAAAAGACAAACATAAA  600

seq1  TATTAGTACCTAGAATTAAACCATAGCAAACCCAGATTCCTACTTAATTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTACCTAGAATTAAACCATAGCAAACCCAGATTCCTACTTAATTC  650

seq1  ATGTGTAAAAGCATAATGAATATCAACCAGGACAATATATGTATGAAAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAAAAGCATAATGAATATCAACCAGGACAATATATGTATGAAAAA  700

seq1  TGTAATATAGACAAGGATATCAAAATAGCCATTATGAATATATTCAAGGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATAGACAAGGATATCAAAATAGCCATTATGAATATATTCAAGGA  750

seq1  CCTTAATGAGGATATGAATGAATCCATTAATAAAGTCTATGAAAACACAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATGAGGATATGAATGAATCCATTAATAAAGTCTATGAAAACACAA  800

seq1  GCAAACAGTGAAGGAAATGAAAACTCTATGAAATAAGACAAAAACTACAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAGTGAAGGAAATGAAAACTCTATGAAATAAGACAAAAACTACAT  850

seq1  AGTTAAATCTTACTAATAAAGTACAAAAGATAGAATTC  883
      ||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATCTTACTAATAAAGTACAAAAGATAGAATTC  888