BAC Information

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BAC

Clone NameB6Ng01-179K02
Chromosome3 (Build37)
Map Location 64,153,578 - 64,154,226
singlet/doubletsinglet
Overlap gene4930518C23Rik, EG667031
Upstream geneMme, Plch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, LOC380739, EG637004
Downstream geneEG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110, Kcnab1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179K02.bB6Ng01-179K02.g
ACCGA006299GA006300
length8321,191
definitionB6Ng01-179K02.b B6Ng01-179K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgcaagagcagcaaatgttcctaatcaatgctcccttcctcc
agtatttttagactgatttttgatttaggtttatctatttttttattatg
actaagctatgcatatatattatttggtgatgatgctgtgtctctttcta
gatgtaatttcttttatgcatataaatgttttgtctacaattacttattt
gggccacatgcatgcctgatgccaatggagatcagaaaagggcattaaat
cctctgaaactgtagttctaggcaataatgagtttccatatcatgcctgg
gtatcaagtgttgccatctacaaaatcaaaaaaaaaaagtgctataaata
tctgagcaatttctccaaccttagttgtgtcctttttaaatatttcatat
caggggtaaaatgatataattacctttcattattactgttaagtaacgcc
accatttttctcaacagaaagtattatatttccctacagtactaataatt
accttgtggtagtcactcatgcctctacccactctttgccaccactcatg
tgactcatgacttcttcatagctgagaaattattgccagggattcatagc
taacttcagctacattgtgagttccagtcccaccagagatacagggtaaa
gccatctctataaactcaaatcaaaatgtaaacagcaattatccttctag
acaatattgtgcagctgtaaaactatcttgctttcattatcctttgcccg
tccaatttttgtgaccattgaaaattaatcttgtgctaaatacatatgga
taccttttgctgttttgaaaaatgattctttt
gaattcctaaacccgataaacagcttcaatgaagtacctggatataaaat
taactccaacaagtcaatggcattactctacacaaaggataaacaggctg
agaaagaaattagggaaagaaaacccttctcaatagtaacaaataatata
aaatactttggtgtgactctaactaaggaagtgaaagatctgtatgataa
aaaacttcaagcctctaaaaaaagaaattaaataagatctcagaaggtgg
aaagatctcccatgctcatgaatgggggaggatcaatataataaaaatgg
ttatcttgccaaaagcaatctacagattcaatgcaatccccatcaaactt
ccaactcaattcttcaacgaattagaaagggcaatctgcagattcatctg
gaataacaaaaaacctaggatagcaaaaactcttctcaaggataaaagaa
cctctggtggaatcaccatgcctgacctaaagctgtactacagagcaata
atgtgataaaaaaaaaactgcatgatactggtatagttacagacaagtag
accaatggaatagaattgaagacccagaaatgaacccacacacctatggt
cacttgatctttcacaagagagctaaaaccatccagtgaaaaaagacagc
attttcaacaaatgatggttatcgtgtagaagattgggaattgatccatt
cctatctccttgtactaaggtcaaatctaaatgaaccaaggaactccaca
taaaactagagacagtgaaattatagaggagaaagtgggggaaagcctcg
aagatatgggcacagggggaaaaattcctgaatagaacagcaaaggcttt
gtgttataagattgagaatcaacaaatgggacctcataaaattgcaaagc
ttctgtaaggcaaaagacacagttcaataagactaaaaaggccacacagg
attgggaaagggatctttacctatcctaaatcagataggggacttaatta
tcccaatatatataacttaactttgttcagagggtgactcccagaaagtc
aaattaacaccattaaaatttgggcctcagaggctaaccaagattctcac
ttgagatacctaaccggctggatagccaccttgaaaatgtcagcattcct
atctatcaagaaaatgcactcaatattagcccttaggaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64153578_64154226
seq2: B6Ng01-179K02.b_222_873 (reverse)

seq1  AAAAGAATCATTTTTC-AAACAGC-AAAGGTAT-CATATGTATTTAGCAC  47
      |||||||||||||||| ||||||| |||||||| ||||||||||||||||
seq2  AAAAGAATCATTTTTCAAAACAGCAAAAGGTATCCATATGTATTTAGCAC  50

seq1  AAGATTAATTTTCAATGGTCACAAAAATTGGACGGGCAAAGGATAATGAA  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAATTTTCAATGGTCACAAAAATTGGACGGGCAAAGGATAATGAA  100

seq1  AGCAAGATAGTTTTACAGCTGCACAATATTGTCTAGAAGGATAATTGCTG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGATAGTTTTACAGCTGCACAATATTGTCTAGAAGGATAATTGCTG  150

seq1  TTTACATTTTGATTTGAGTTTATAGAGATGGCTTTACCCTGTATCTCTGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTTGATTTGAGTTTATAGAGATGGCTTTACCCTGTATCTCTGG  200

seq1  TGGGACTGGAACTCACAATGTAGCTGAAGTTAGCTATGAATCCCTGGCAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTGGAACTCACAATGTAGCTGAAGTTAGCTATGAATCCCTGGCAA  250

seq1  TAATTTCTCAGCTATGAAGAAGTCATGAGTCACATGAGTGGTGGCAAAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTCAGCTATGAAGAAGTCATGAGTCACATGAGTGGTGGCAAAGA  300

seq1  GTGGGTAGAGGCATGAGTGACTACCACAAGGTAATTATTAGTACTGTAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAGAGGCATGAGTGACTACCACAAGGTAATTATTAGTACTGTAGG  350

seq1  GAAATATAATACTTTCTGTTGAGAAAAATGGTGGCGTTACTTAACAGTAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATAATACTTTCTGTTGAGAAAAATGGTGGCGTTACTTAACAGTAA  400

seq1  TAATGAAAGGTAATTATATCATTTTACCCCTGATATGAAATATTTAAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAGGTAATTATATCATTTTACCCCTGATATGAAATATTTAAAAA  450

seq1  GGACACAACTAAGGTTGGAGAAATTGCTCAGATATTTATAGCACTTTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAACTAAGGTTGGAGAAATTGCTCAGATATTTATAGCACTTTTTT  500

seq1  TTTTTGATTTTGTAGATGGCAACACTTGATACCCAGGCATGATATGGAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATTTTGTAGATGGCAACACTTGATACCCAGGCATGATATGGAAA  550

seq1  CTCATTATTGCCTAGAACTACAGTTTCAGAGGATTTAATGCCCTTTTCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTATTGCCTAGAACTACAGTTTCAGAGGATTTAATGCCCTTTTCTG  600

seq1  ATCTCCATTGGCATCAGGCATGCATGTGGCCCAAATAAGTAATTGTAGAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCATTGGCATCAGGCATGCATGTGGCCCAAATAAGTAATTGTAGAC  650

seq1  AA  649
      ||
seq2  AA  652