BAC Information

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BAC

Clone NameB6Ng01-179M24
Chromosome3 (Build37)
Map Location 56,399,757 - 56,400,755
singlet/doubletsinglet
Overlap genenone
Upstream geneMab21l1, 4933417G07Rik
Downstream geneLOC100040139, LOC666585, Tm4sf1, LOC383862, Tm4sf4, Wwtr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179M24.bB6Ng01-179M24.g
ACCGA006430GA006431
length1,0921,022
definitionB6Ng01-179M24.b B6Ng01-179M24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttatgtatttcacccaaacgtgccaccatctggactcattaacg
atgaggtgaagagtaagaattgtcagcaatattcattccatcatttcaaa
attctaataatacaaactgtgaataatttctggagcaaatgaactcatca
ttgcataaactaaatgagtttattaataaaaggtatttttttcctgagta
caacatgttaattctgataaatcatcacataccttgggtattttaaacaa
agagacattgtcttaattagatttctattgctctaacaaagacaatgatc
aaaccaacttgggagggaaagaatttatttggcttacaagttctaattgc
aatccatcatgaagaaaattgaggcaggaacccagaggcaggaactgaag
caaagactgtagaggaccactgtttattggcttgctccccatggcttgtt
cattttgctttcttaaacaacctgcccaggactacatgcccagaggtgat
accacccacaatgggctaggccctctcatactaatcattaatccaaaaag
tgcccaatagagttgcctacaggaaaatttgaccagggcattttctcatt
ttgacattgcctcttcctagatgatcctggcttgtttcaagttgatgaaa
acaaacaaacaaacccacctaactgacacagatgcttaagagaccaagaa
gagtctggccttgcttccaattcataatttcatagaatcgctttccttaa
aaaatcattttccatatttttccataaacaaagccatccccttctgttgg
aaactaaaaaggggacccaggggaagaggggggagaagggaataagaccc
ctcaccccggccagagttttaccttatttctctgggacagttcaggcatg
gggaaggcctgcccacacactttccacttcagcctcaaaggttggggcat
ttcaagctcttttgacccaactctttcaggtgggtgggccagggtgccat
gctccaatccttggatagcccccggttgcctgctttcctaaagctcttgg
aatattaggaacgatgtaaataatgtgctgcagagggttctc

gaattcctgaaattagattagaggtataaagcttgtagtgtgagtatcag
cagagtatcatttatccatctctatactcgtatttgaaggattctctata
tttccgtgtgttagaaagttcatctccagatgattatgttaatggttctg
agaggtaaggtctctcaatgattggattataagagtctgtccttatgatg
ggttattctcttccttacttaatgaatttaatgaattctcaagagagcga
ttttgttgggaaggcgagctgtgtaagttctgcctcacagtgaaatgccc
ttagctgcacagcaccaaggaagccctcaccagggaccaagctgacactg
gcaccatgatctccactagcaaacccctctcactataaacactcttctgt
ctcttttcttcaaggattacttgatctgtggtgttttgttacaacatcag
gaaaaaaaaggttaacatggatttggacaactgatatcagggtttacatt
agattcccaaggggaaaagcatggaataagaagggttatttgaagcttca
agtacctagtactataagaacagaggaagatagaatttgcaaattaatag
gtggcaatatcagagggttgtccttgttctttgctgtgcttacttcatgg
cagcccagcagaatgtatggatcagtcaagtatacctttacctgtagcat
gattagaactgataaagatacttttgtgtataagagccaaactcttaggt
ctttatgggttatctagcaaaccctaccaaatccaatcttttcttgtctt
acctcctgaaatgtgccaatgtttgtaagtcttgtgtaccaatttaaaga
cattactgtgcaatgcataaagggagagggaccctcatgtctcctctctt
aaggacctttccctttcccactatgatgtgatgttgggcccttgtgatta
tcctcaagccttttgttcctattcaagtgctttgctctgtttgtcctctg
gtacctccccctgttttaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56399757_56400755
seq2: B6Ng01-179M24.g_64_1085

seq1  GAATTCCTGAAATTAGATTAGAGGTATAAAGCTTGTAGTGTGAGTATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAAATTAGATTAGAGGTATAAAGCTTGTAGTGTGAGTATCAG  50

seq1  CAGAGTATCATTTATCCATCTCTATACTCGTATTTGAAGGATTCTCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTATCATTTATCCATCTCTATACTCGTATTTGAAGGATTCTCTATA  100

seq1  TTTCCGTGTGTTAGAAAGTTCATCTCCAGATGATTATGTTAATGGTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGTGTGTTAGAAAGTTCATCTCCAGATGATTATGTTAATGGTTCTG  150

seq1  AGAGGTAAGGTCTCTCAATGATTGGATTATAAGAGTCTGTCCTTATGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAAGGTCTCTCAATGATTGGATTATAAGAGTCTGTCCTTATGATG  200

seq1  GGTTATTCTCTTCCTTACTTAATGAATTTAATGAATTCTCAAGAGAGCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTCTCTTCCTTACTTAATGAATTTAATGAATTCTCAAGAGAGCGA  250

seq1  TTTTGTTGGGAAGGCGAGCTGTGTAAGTTCTGCCTCACAGTGAAATGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGGGAAGGCGAGCTGTGTAAGTTCTGCCTCACAGTGAAATGCCC  300

seq1  TTAGCTGCACAGCACCAAGGAAGCCCTCACCAGGGACCAAGCTGACACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGCACAGCACCAAGGAAGCCCTCACCAGGGACCAAGCTGACACTG  350

seq1  GCACCATGATCTCCACTAGCAAACCCCTCTCACTATAAACACTCTTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATGATCTCCACTAGCAAACCCCTCTCACTATAAACACTCTTCTGT  400

seq1  CTCTTTTCTTCAAGGATTACTTGATCTGTGGTGTTTTGTTACAACATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCTTCAAGGATTACTTGATCTGTGGTGTTTTGTTACAACATCAG  450

seq1  GAAAAAAAAGGTTAACATGGATTTGGACAACTGATATCAGGGTTTACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAGGTTAACATGGATTTGGACAACTGATATCAGGGTTTACATT  500

seq1  AGATTCCCAAGGGGAAAAGCATGGAATAAGAAGGGTTATTTGAAGCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCCAAGGGGAAAAGCATGGAATAAGAAGGGTTATTTGAAGCTTCA  550

seq1  AGTACCTAGTACTATAAGAACAGAGGAAGATAGAATTTGCAAATTAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTAGTACTATAAGAACAGAGGAAGATAGAATTTGCAAATTAATAG  600

seq1  GTGGCAATATCAGAGGGTTGTCCTTGTTCTTTGCTGTGCTTACTTCATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAATATCAGAGGGTTGTCCTTGTTCTTTGCTGTGCTTACTTCATGG  650

seq1  CAGCCCAGCAGAATGTATGGATCAGTCAAGTATACCTTTACCTGTAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGCAGAATGTATGGATCAGTCAAGTATACCTTTACCTGTAGCAT  700

seq1  GATTAGAACTGAT-AAGATACTTTTGTGTATAAGAGCCAAACTCTAAGGT  749
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  GATTAGAACTGATAAAGATACTTTTGTGTATAAGAGCCAAACTCTTAGGT  750

seq1  C-TTAT-GGTTATCTAGCAAACCCTACCAAATCCAATCTTT--CTGTC-T  794
      | |||| ||||||||||||||||||||||||||||||||||   |||| |
seq2  CTTTATGGGTTATCTAGCAAACCCTACCAAATCCAATCTTTTCTTGTCTT  800

seq1  ACCTCCTGAAATGTGCCAATGTTTGTAAGTCTTGTGTACC-ATTTAAAGA  843
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCTCCTGAAATGTGCCAATGTTTGTAAGTCTTGTGTACCAATTTAAAGA  850

seq1  CATTACTGTGCAATGCAGAAA-GGAGAGGGACCCTCATGTCTCCTCTCTT  892
      ||||||||||||||||| ||| ||||||||||||||||||||||||||||
seq2  CATTACTGTGCAATGCATAAAGGGAGAGGGACCCTCATGTCTCCTCTCTT  900

seq1  AAGGACCTTT-CCTTTCCCACTATGATGTGATGTTGGGCTCT--TGAATA  939
      |||||||||| |||||||||||||||||||||||||||| ||  ||| ||
seq2  AAGGACCTTTCCCTTTCCCACTATGATGTGATGTTGGGCCCTTGTGATTA  950

seq1  TCCTC-AGCCTTTTG-TCCTATTCAGGTGCTT---GCTGTTTG-CCTCT-  982
      ||||| ||||||||| ||||||||| ||||||    ||||||| ||||| 
seq2  TCCTCAAGCCTTTTGTTCCTATTCAAGTGCTTTGCTCTGTTTGTCCTCTG  1000

seq1  GTA-CTCCC----TGTTAGGAG  999
      ||| |||||    | |||||||
seq2  GTACCTCCCCCTGTTTTAGGAG  1022


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