BAC Information

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BAC

Clone NameB6Ng01-180D05
Chromosome3 (Build37)
Map Location 60,166,330 - 60,167,453
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823
Downstream geneLOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853, P2ry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180D05.bB6Ng01-180D05.g
ACCGA006703GA006704
length1,1201,010
definitionB6Ng01-180D05.b B6Ng01-180D05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcagtatgttatttttatcacagttatatcttcaagacttgtt
ggagtatccgtaagagttacatttacatcctcaatgagtaagtgggatac
tgcaaataggaaataaagtactgtgaattttggacagttatcaatacatg
tacacagttgtacacttaaagtacattgcttcaagcatttttcattgaag
cacattttaatttctcatattaatattatttctacacgaagggtaacaga
catcatataagtgccatagaattcaataaaaacctattttgagatgaaat
gactctcctagttctccatggtattgtttaaaacagtgtaaggagcttat
aaagtggagaacttcacagaaatctccaagtgctgcagaagtggctgagt
aactcaagaataggcatctcaaaaatgaatatgctcaaggattgctcttc
ctcctcatttctgtaattgtgtgacataattgtaggagaaaacacaggcc
tgacctggcagagagtctacctggcatcctgtgcttccaaataagaagca
caaaatatcacgctcctgattgctttcagaacactgaattctgaagtagt
atgagtcaccagtgtctggcctgcagaccactctgcactcatcacatctc
cttgtatgtgcatcttctacatagagaccctggtcatatgagtgctcatt
gtcagatccaagggaatgtgctaaccaatcatagttgataggcttccact
atataatgtataatagttgttcacgtgtaatagagcagacattgtttcct
gaaaccatctccagggtggttcatctcagtgccctttactgagcaagagg
catcccagtcttggacataattcctgcctagaaattgtgaagcagactgt
tgacttctcagccttttatatttgcctttcctttaattatttccataaat
tctggatgcctatttatacagaaaaatgtcaaaatacatagtaaaaattg
taaatttatcagagatgtgcataatgcatacccagtggaaatcatatact
tttttataaaaagcacaagcacagaagtattgaagaataaagatagacat
gaaaataatatgataatgat
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagtcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttcttcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacgtgggtgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttggcttccttttttctagg
gcttttaagatgtgttgtcaagctgctagtaatgtgctgtctcccgtttc
tcttggaaggcctcacgctatgaagtttccctcttaaaaatgctttcatt
gtgtcccata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_60166330_60167453
seq2: B6Ng01-180D05.b_43_1162 (reverse)

seq1  ATCATTA----ATAATTTTCATTGTCTATTCTTTTATCTTCAATACTTTC  46
      |||||||    || ||||||| |||||| |||||  |||||||||| |||
seq2  ATCATTATCATATTATTTTCA-TGTCTA-TCTTTATTCTTCAATAC-TTC  47

seq1  TGTGCTTTGTGCCTTTTTATAAAAAGGTAATATGATTTCCACTTGGGTAT  96
      ||||| ||||| ||||||||||||| || ||||||||||||| |||||||
seq2  TGTGC-TTGTG-CTTTTTATAAAAAAGT-ATATGATTTCCAC-TGGGTAT  93

seq1  GCATTTATGCACATCTCTGATAAATTTACAATTTTTACTATGTATTTTGA  146
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCA-TTATGCACATCTCTGATAAATTTACAATTTTTACTATGTATTTTGA  142

seq1  CATTTTTCTGTATAAATAGGCATCCAGAATTTATGGAAATAATTAAAGGA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCTGTATAAATAGGCATCCAGAATTTATGGAAATAATTAAAGGA  192

seq1  AAGGCAAATATAAAAGGCTGAGAAGTCAACAGTCTGCTTCACAATTTCTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAATATAAAAGGCTGAGAAGTCAACAGTCTGCTTCACAATTTCTA  242

seq1  GGCAGGAATTATGTCCAAGACTGGGATGCCTCTTGCTCAGTAAAGGGCAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAATTATGTCCAAGACTGGGATGCCTCTTGCTCAGTAAAGGGCAC  292

seq1  TGAGATGAACCACCCTGGAGATGGTTTCAGGAAACAATGTCTGCTCTATT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGAACCACCCTGGAGATGGTTTCAGGAAACAATGTCTGCTCTATT  342

seq1  ACACGTGAACAACTATTATACATTATATAGTGGAAGCCTATCAACTATGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTGAACAACTATTATACATTATATAGTGGAAGCCTATCAACTATGA  392

seq1  TTGGTTAGCACATTCCCTTGGATCTGACAATGAGCACTCATATGACCAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTAGCACATTCCCTTGGATCTGACAATGAGCACTCATATGACCAGG  442

seq1  GTCTCTATGTAGAAGATGCACATACAAGGAGATGTGATGAGTGCAGAGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTATGTAGAAGATGCACATACAAGGAGATGTGATGAGTGCAGAGTG  492

seq1  GTCTGCAGGCCAGACACTGGTGACTCATACTACTTCAGAATTCAGTGTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAGGCCAGACACTGGTGACTCATACTACTTCAGAATTCAGTGTTC  542

seq1  TGAAAGCAATCAGGAGCGTGATATTTTGTGCTTCTTATTTGGAAGCACAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCAATCAGGAGCGTGATATTTTGTGCTTCTTATTTGGAAGCACAG  592

seq1  GATGCCAGGTAGACTCTCTGCCAGGTCAGGCCTGTGTTTTCTCCTACAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCAGGTAGACTCTCTGCCAGGTCAGGCCTGTGTTTTCTCCTACAAT  642

seq1  TATGTCACACAATTACAGAAATGAGGAGGAAGAGCAATCCTTGAGCATAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACACAATTACAGAAATGAGGAGGAAGAGCAATCCTTGAGCATAT  692

seq1  TCATTTTTGAGATGCCTATTCTTGAGTTACTCAGCCACTTCTGCAGCACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTGAGATGCCTATTCTTGAGTTACTCAGCCACTTCTGCAGCACT  742

seq1  TGGAGATTTCTGTGAAGTTCTCCACTTTATAAGCTCCTTACACTGTTTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATTTCTGTGAAGTTCTCCACTTTATAAGCTCCTTACACTGTTTTA  792

seq1  AACAATACCATGGAGAACTAGGAGAGTCATTTCATCTCAAAATAGGTTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATACCATGGAGAACTAGGAGAGTCATTTCATCTCAAAATAGGTTTT  842

seq1  TATTGAATTCTATGGCACTTATATGATGTCTGTTACCCTTCGTGTAGAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAATTCTATGGCACTTATATGATGTCTGTTACCCTTCGTGTAGAAA  892

seq1  TAATATTAATATGAGAAATTAAAATGTGCTTCAATGAAAAATGCTTGAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTAATATGAGAAATTAAAATGTGCTTCAATGAAAAATGCTTGAAG  942

seq1  CAATGTACTTTAAGTGTACAACTGTGTACATGTATTGATAACTGTCCAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTACTTTAAGTGTACAACTGTGTACATGTATTGATAACTGTCCAAA  992

seq1  ATTCACAGTACTTTATTTCCTATTTGCAGTATCCCACTTACTCATTGAGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAGTACTTTATTTCCTATTTGCAGTATCCCACTTACTCATTGAGG  1042

seq1  ATGTAAATGTAACTCTTACGGATACTCCAACAAGTCTTGAAGATATAACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATGTAACTCTTACGGATACTCCAACAAGTCTTGAAGATATAACT  1092

seq1  GTGATAAAAATAACATACTGCAGAATTC  1124
      ||||||||||||||||||||||||||||
seq2  GTGATAAAAATAACATACTGCAGAATTC  1120