BAC Information

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BAC

Clone NameB6Ng01-181G17
Chromosome3 (Build37)
Map Location 71,123,401 - 71,124,450
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041384, LOC625868, LOC670542, EG625901
Downstream geneEG667377, LOC667385, LOC100041459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181G17.bB6Ng01-181G17.g
ACCGA007586GA007587
length1,2181,066
definitionB6Ng01-181G17.b B6Ng01-181G17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagcacttagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatatattggatattagtcc
cctatctgatttgggataggtaaagatcatttcccaatctgttggtggcc
tttttgtcttactgatggtgtcttttgctttgcagaagctttgcaaattt
atgaggtcccatttgttgattcttgatcttacagcagaagccgttgctgt
tctattcaggaatttttcccatgtacccatatcttcgaggcttttcccta
ctttctcctctataagtttcagtgtctctggttttatgtggagttcctta
atccacttagatttgaccttagtacaaggagatagaaatggatcaattca
cattcttctacatgataactgccagttgtgccagcaccatttgttgaaaa
tgctgtcttttttccactggatggttttagctcccttgtcaaacatcaag
ttaccataggtgtgtggattcatctctgggtcttcaattctgttcctttg
gtctacttgtctgtcactataccagtaccatgcagttttgatcacaattg
ctctgtagtacagttttaggtccagcatggtgattccaccagaggttctt
ttatccttgagaagagattttgctatcctcggttttttgttattccagat
gaatctgccaattgtcctttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttctttagagacttgaagttcttatcat
acagatctttcatttccttagttaaagtcacgccaaggtattttatatta
tttgtgactatgagaaggttgttgtttccctaatttctttctcagcctgt
tatcctttgtgtacagaaggccattgacttttggagtaattttttttcca
ttttttattaggattaagctcatacattccaaatgctatacaacacccaa
ttctaccggccactccttgtttgtctgcgttccctggtctgagccatata
taggttggtccaatggaactccgtccaggaatgcggcactagcacctcat
tctgcatactaaatcgta

gaattcttgtttgattcttggagaacctttttattatcaatgattgctta
ctgtgcttatttttcctcagaacaccggacttggtctaatcaatgtggga
gcacgaaagacaaagatcaaagcaggagtacttattcctttttcagaaac
ctggctcttccctagcaatagaagacctaaaatgtctttagtttcccatt
aataaagatttagtgtcttctacttatcaggtataggacagctttttatc
tagtcaccatcaaattcaaagtcagggttgggtaatagttataagtaata
cattaataactgacagtgcacaatcatccagaactcctgatagcatggac
ctttatcttattcttacattaaattaattgtaggtgcctcttttatttcc
acaaagcccatatttatggtatttatgctaaaattagatttggaatgtgt
gttttaggctttaaattctttttttttaaattaatcttttatcatttatt
tatttatttatttatttatttatttaaacaccagatgttcctactccttg
tccactttccaactgttccacatgacatacctcctacctgctcccatgtc
tccatgaggatatccccagtccccagcccccacccaactagacttcaaag
gcatcttttaacattttgtttaattttgtttacacacacacacacacaca
cacacacacacacacacacatatatatatatatatatatatatatatata
tatatatatatatatatataatttttttgtaaaggggcaaagcaatgcat
gctgcttgtcaaacatgcaatttctttttatttatatgaaaccatctgtt
tctggacagttggaagcttatatcccaatactaaacaacctatggaaaga
aaaaagatgcacaagcttgctctttgaaagcatttgccaattatgtttta
acttcctaaactgaaatgattgtactgatgaaagtccatcacagaaacat
tatcatttactttgaaattttgtgaagtttataacagcatttcacaaaag
gcggtaattgaattag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71123401_71124450
seq2: B6Ng01-181G17.g_66_1131

seq1  GAATTCTTGTTTGATTCTTGGAGAACCTTTTTATTATCAATGATTGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTGATTCTTGGAGAACCTTTTTATTATCAATGATTGCTTA  50

seq1  CTGTGCTTATTTTTCCTCAGAACACCGGACTTGGTCTAATCAATGTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTTATTTTTCCTCAGAACACCGGACTTGGTCTAATCAATGTGGGA  100

seq1  GCACGAAAGACAAAGATCAAAGCAGGAGTACTTATTCCTTTTTCAGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGAAAGACAAAGATCAAAGCAGGAGTACTTATTCCTTTTTCAGAAAC  150

seq1  CTGGCTCTTCCCTAGCAATAGAAGACCTAAAATGTCTTTAGTTTCCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCTTCCCTAGCAATAGAAGACCTAAAATGTCTTTAGTTTCCCATT  200

seq1  AATAAAGATTTAGTGTCTTCTACTTATCAGGTATAGGACAGCTTTTTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGATTTAGTGTCTTCTACTTATCAGGTATAGGACAGCTTTTTATC  250

seq1  TAGTCACCATCAAATTCAAAGTCAGGGTTGGGTAATAGTTATAAGTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACCATCAAATTCAAAGTCAGGGTTGGGTAATAGTTATAAGTAATA  300

seq1  CATTAATAACTGACAGTGCACAATCATCCAGAACTCCTGATAGCATGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATAACTGACAGTGCACAATCATCCAGAACTCCTGATAGCATGGAC  350

seq1  CTTTATCTTATTCTTACATTAAATTAATTGTAGGTGCCTCTTTTATTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCTTATTCTTACATTAAATTAATTGTAGGTGCCTCTTTTATTTCC  400

seq1  ACAAAGCCCATATTTATGGTATTTATGCTAAAATTAGATTTGGAATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCCATATTTATGGTATTTATGCTAAAATTAGATTTGGAATGTGT  450

seq1  GTTTTAGGCTTTAAATTCTTTTTTTTTAAATTAATCTTTTATCATTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGGCTTTAAATTCTTTTTTTTTAAATTAATCTTTTATCATTTATT  500

seq1  TATTTATTTATTTATTTATTTATTTAAACACCAGATGTTCCTACTCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTATTTATTTATTTAAACACCAGATGTTCCTACTCCTTG  550

seq1  TCCACTTTCCAACTGTTCCACATGACATACCTCCTACCTGCTCCCATGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTCCAACTGTTCCACATGACATACCTCCTACCTGCTCCCATGTC  600

seq1  TCCATGAGGATATCCCCAGTCCCCAGCCCCCACCCAACTAGACTTCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGAGGATATCCCCAGTCCCCAGCCCCCACCCAACTAGACTTCAAAG  650

seq1  GCATCTTTTAACATTTTGTTTAATTTTGTTTACACACACACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTTAACATTTTGTTTAATTTTGTTTACACACACACACACACACA  700

seq1  CACACACACACACACACACATATATATATATATATATATATATATATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACATATATATATATATATATATATATATATATA  750

seq1  TATATATATATATATATATAATTTTTTTGTCAAAGGGCAAAGCAATGCAT  800
      |||||||||||||||||||||||||||||| || ||||||||||||||||
seq2  TATATATATATATATATATAATTTTTTTGTAAAGGGGCAAAGCAATGCAT  800

seq1  GCAGCTTGGCAAACATGCAATTTCTTTTTATTTATATGAAACCATCTGTT  850
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTGTCAAACATGCAATTTCTTTTTATTTATATGAAACCATCTGTT  850

seq1  TCTGGACAGTTGGAAGCTTATATCCCAATACTAAACAA-CTATGGAAAG-  898
      |||||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  TCTGGACAGTTGGAAGCTTATATCCCAATACTAAACAACCTATGGAAAGA  900

seq1  AAGAAGATGCACAAGC-TGCTC-TTGAAAGCA-TTGCCAATTA-GTTTTA  944
      || ||||||||||||| ||||| ||||||||| |||||||||| ||||||
seq2  AAAAAGATGCACAAGCTTGCTCTTTGAAAGCATTTGCCAATTATGTTTTA  950

seq1  ACTTCATAAACTG-AATGA-TGTACTGATGAAGGT-CATCACAG-AACA-  989
      ||||| ||||||| ||||| |||||||||||| || |||||||| |||| 
seq2  ACTTCCTAAACTGAAATGATTGTACTGATGAAAGTCCATCACAGAAACAT  1000

seq1  TATCA-TTACTTGGAAATTT--GGAAG-TTATAACAGCA-TTCACAAAA-  1033
      ||||| |||||| |||||||   |||| ||||||||||| ||||||||| 
seq2  TATCATTTACTTTGAAATTTTGTGAAGTTTATAACAGCATTTCACAAAAG  1050

seq1  GCAGTAATTAAAATTAG  1050
      || ||||||  ||||||
seq2  GCGGTAATT-GAATTAG  1066


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