BAC Information

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BAC

Clone NameB6Ng01-182L15
Chromosome3 (Build37)
Map Location 26,631,159 - 26,632,295
singlet/doubletsinglet
Overlap geneSpata16
Upstream geneNlgn1, LOC621017, LOC229152
Downstream geneLOC665258, Ect2, Aadacl1, LOC100040527, Tnfsf10, Ghsr, Fndc3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182L15.bB6Ng01-182L15.g
ACCGA008541GA008542
length1,1221,113
definitionB6Ng01-182L15.b B6Ng01-182L15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatattcttgccatgtttctcagatactgtgacttctgccaata
aatcctaataaatttttcacctcttttctttcagtaacatcctagaggat
ctgattcagactcgaattaatcactgatcaggttaatggctcctaggagt
ttacttccgatagcccttattatattaaatcaaacttgatagtgagctag
atcattgctccattgggctttcataaaagcactggtatttaatatgattt
atgacaagttttctcctaatacctttgcttattgtgtgctttcattttaa
aacattttgtgccaatggcactgttcaatatctatcacccgtttaaaata
ttttataggaaacgtttacggtaaaatatgtcacatttttattataggca
cacaataatgaacaagagccatttaacttacaaccaaaatattaagattt
tacatagttttgaaaaattatatgtgcatgtgtacatcttgcttattaaa
aagatagcttgtgtggcagcagggccaggaggcttaaagtgtgattcttt
tagctttgcagcaaaggagcagctctggggaaaccctttgaagcacacgc
tgaagacatagcaagcatcgcaagtttcattgagacaaagctcgtcacat
gctacctacgtatgcggaagcctgaccttgccctgaaccatgcgcacagg
taaaacgaaatgccaaaggctaagaactgtgcatccaaatctgggtttac
ctggtagccttccattgtattgcagtttaaggttgaaactcaaagattcc
acatcacctgatgtacaaatctgagcaaatcacaaatcaggaagcccaca
gagggttcaacccctagaggaagaaaaaaacaaaacagaacaaaacaaaa
cagagtggatgttcacaatgcaaaagcaattgcatcaagaaagaaagaaa
tatgagaataagataggagaggagacactgagggaaaggagagcttgtaa
actacagagaacatggggaacagacagatgtggactgtggtgactcaagg
gaactgccatcctcagacagctttcaaagcacgactgtggttatcctctg
tctaaggttgcacttatgtttg

gaattcctacttttggggtactctcagggttcaatgcttgggccttgtct
ctttcttttgtttccatttccttggtgagcacgtgggtttcatggttttt
aagtaccaaatatatatggcaattcaagacttctgccatcagtctaaacc
actttctgaattactgtaatcttctggaagctaacttctcagcctcgcta
cttctcaacatttctgcttggatgcccaagtggtatccagtggaacagaa
ccagagtgggccgctgatcttccttcctctcccccaacagctagtagtct
tctcagatatatcagcacacagtaattttataagttatggaggacaatat
gatattttgatggatatatatccatatccatatatacattgtgtttacgt
ggaataattaaatcttcataattagcatgtctgtcgatgacgcttctatc
attctctggagtgaaatattcaaactccttgctttttgtgaaactgaagt
tatactacatactagcatgtactcaccatcctatgtacttgcacgaacaa
tctcattttcctatcacctgtccctggcgaccaactccttccacccactc
tttccccctccccccagcctctgctaatcattcagctactctatatttct
agaaaattagcttcttttgcttccactggtaaggctgtgggatatgatac
ttccttcagagtctggtgtaccacactcagcacaaggacttctgggttca
cccgcacagttgcagacaagcaggaattcattgttctctggttaaatagt
atacatgtctccataccacattttccttctaccatccatccactgatgga
ggcatgggtgggtttcaaaccttggcttttgtgctgtgatcgatgtagaa
gtgtggggcatctttttgacatgctaactttattcctgttgagatggtgc
ctgctagagtcaattgctgggttagactgtagttacccccaaattcttga
ctcaatagtgcttcttctctcattctccaactagttagcctgctccagat
tacagcaccctttcacactctctagcattggttaccttggtccaccacac
tcttatctgaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_26631159_26632295
seq2: B6Ng01-182L15.b_47_1168

seq1  GAATTCCATATTCTTGCCATGTTTCTCAGATACTGTGACTTCTGCCAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTCTTGCCATGTTTCTCAGATACTGTGACTTCTGCCAATA  50

seq1  AATCCTAATAAATTTTTCACCTCTTTTCTTTCAGTAACATCCTAGAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTAATAAATTTTTCACCTCTTTTCTTTCAGTAACATCCTAGAGGAT  100

seq1  CTGATTCAGACTCGAATTAATCACTGATCAGGTTAATGGCTCCTAGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCAGACTCGAATTAATCACTGATCAGGTTAATGGCTCCTAGGAGT  150

seq1  TTACTTCCGATAGCCCTTATTATATTAAATCAAACTTGATAGTGAGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCCGATAGCCCTTATTATATTAAATCAAACTTGATAGTGAGCTAG  200

seq1  ATCATTGCTCCATTGGGCTTTCATAAAAGCACTGGTATTTAATATGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGCTCCATTGGGCTTTCATAAAAGCACTGGTATTTAATATGATTT  250

seq1  ATGACAAGTTTTCTCCTAATACCTTTGCTTATTGTGTGCTTTCATTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAGTTTTCTCCTAATACCTTTGCTTATTGTGTGCTTTCATTTTAA  300

seq1  AACATTTTGTGCCAATGGCACTGTTCAATATCTATCACCCGTTTAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTGTGCCAATGGCACTGTTCAATATCTATCACCCGTTTAAAATA  350

seq1  TTTTATAGGAAACGTTTACGGTAAAATATGTCACATTTTTATTATAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGGAAACGTTTACGGTAAAATATGTCACATTTTTATTATAGGCA  400

seq1  CACAATAATGAACAAGAGCCATTTAACTTACAACCAAAATATTAAGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATAATGAACAAGAGCCATTTAACTTACAACCAAAATATTAAGATTT  450

seq1  TACATAGTTTTGAAAAATTATATGTGCATGTGTACATCTTGCTTATTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTTTTGAAAAATTATATGTGCATGTGTACATCTTGCTTATTAAA  500

seq1  AAGATAGCTTGTGTGGCAGCAGGGCCAGGAGGCTTAAAGTGTGATTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGCTTGTGTGGCAGCAGGGCCAGGAGGCTTAAAGTGTGATTCTTT  550

seq1  TAGCTTTGCAGCAAAGGAGCAGCTCTGGGGAAACCCTTTGAAGCACACGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTGCAGCAAAGGAGCAGCTCTGGGGAAACCCTTTGAAGCACACGC  600

seq1  TGAAGACATAGCAAGCATCGCAAGTTTCATTGAGACAAAGCTCGTCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACATAGCAAGCATCGCAAGTTTCATTGAGACAAAGCTCGTCACAT  650

seq1  GCTACCTACGTATGCGGAAGCCTGACCTTGCCCTGAACCATGCGCACAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCTACGTATGCGGAAGCCTGACCTTGCCCTGAACCATGCGCACAGG  700

seq1  TAAAACGAAATGCCAAAGGCTAAGAACTGTGCATCCAAATCTGGGTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACGAAATGCCAAAGGCTAAGAACTGTGCATCCAAATCTGGGTTTAC  750

seq1  CTGGTAGCCTTCCATTGTATTGCAGTTTAAGGTTGAAACTCAAAGATTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGCCTTCCATTGTATTGCAGTTTAAGGTTGAAACTCAAAGATTCC  800

seq1  ACATCACCTGATGTACAAATCTGAGCAAATCACAAATCAGGAAGCCCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACCTGATGTACAAATCTGAGCAAATCACAAATCAGGAAGCCCACA  850

seq1  GAGGGTTCAACCCCTAGAGGAAGAAAAAAACAAAACAGAACAAAACAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTCAACCCCTAGAGGAAGAAAAAAACAAAACAGAACAAAACAAAA  900

seq1  CAGAGGTGGATGTTCACAATGCAAAAGCAATTGCATCAAGAAAGAAAGAA  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGA-GTGGATGTTCACAATGCAAAAGCAATTGCATCAAGAAAGAAAGAA  949

seq1  ATATGAGAATAAGATAAGGAGAGGAGACACTGAGGGAAAGGAGAGCTTGT  1000
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATATGAGAATAAGAT-AGGAGAGGAGACACTGAGGGAAAGGAGAGCTTGT  998

seq1  AAAACTACAGAGAACATGGGGAACAGACAGGAATGTGGACTGTGGTTGAC  1050
       |||||||||||||||||||||||||||||  ||||||||||||| ||||
seq2  -AAACTACAGAGAACATGGGGAACAGACAG--ATGTGGACTGTGG-TGAC  1044

seq1  TCAGGGGACCTTGGCATCCTCCAGACAGCTTTCCAAAGGCACGAACTGTT  1100
      ||| |||| | || |||||| ||||||||||||  || ||||| ||||| 
seq2  TCAAGGGAAC-TGCCATCCT-CAGACAGCTTTC--AAAGCACG-ACTGTG  1089

seq1  GTTAT-CTCTGTCCTTAAAGGTTTGCAATTTATGTTTG  1137
      ||||| |||||||  |||  | |||| | |||||||||
seq2  GTTATCCTCTGTC--TAA--GGTTGC-ACTTATGTTTG  1122


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