BAC Information

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BAC

Clone NameB6Ng01-182P14
Chromosome3 (Build37)
Map Location 91,718,398 - 91,854,925
singlet/doubletdoublet
Overlap genePglyrp3, EG619750
Upstream geneEG668174, LOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik, LOC100042463
Downstream geneLor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543, LOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a, Sprr4, LOC100042581, Ivl, Smcp, Lce1a1, Lce1b, LOC620325, Lce1a2, Lce1c, Lce1d, LOC100043062, Lce1e, Lce1f, LOC668264, Lce1g, Lce1h, Lce1i, LOC545547, LOC631101, Kprp, Lce1l, 2310050C09Rik, Lce3a, Lce3b, Lce3c, LOC630994, 2310001H18Rik, Lce3f, Crct1, Lce1m
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182P14.bB6Ng01-182P14.g
ACCGA008721GA008722
length502780
definitionB6Ng01-182P14.b B6Ng01-182P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,854,418 - 91,854,925)(91,718,398 - 91,719,169)
sequence
tgcccccccaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaa
aacaaaacaaaacaaaacaaaacccaaaaaaacctgaatccaggcagtcc
ttactcgccctctgctggttgattcaagaattgcacctatatttcacatg
atagccctttaaacccagagagtttccttcctctcgcagtattgctctac
aggaagccttgtgattgataggtattttctaaccagagtcttatttgttt
agtacttactccaaaaagtatagtatgtgctatgttttagagagagagag
agagagagagagagagagagagagagagagagagagagaaagagagcgaa
ggatatgctttggtagaggcgcgacagtatggtgagggtgggaggggtgc
cataatgagcccacgctgaggcatcacttccccctgaggtacagccatgt
gatggatatagtatggaatagagttttgttagggcatgggaagtggagtt
gg
gaattcagagaattggtgagaagtgaatttccaaatttttacagggtagg
tcttcttcctgtatatggtgtttatgtatgcaacaaagagaaagttaaaa
ctccattcagggtgactttggtggtcatatttatttattgatacttagga
atctgctgctagactgtaatgtgagatcccatgttctagaccttaggtat
agagttattcacctgtgacagagaggaacaaattgaaaaacagagttata
ttcagtgccctatttgccgggaggatatattgggtctgattttcttgtgt
gtgtgggttttttttgtatttgttttttgtttgcctgatcattcattgtt
gatcaatcaaagctgagtggcaatggtaaaagagatggacttttcacttt
aaggttggaacagttgagctaagtccatgttcttataaaatgacacattc
taagatggtgattgactaggcagtagaggaatactaagcttcaaagggga
tttgtgatagtcctaggttccttttattctagagatctagggtagaaaat
tcaagaaaaaaggaacataaggaaaaccacattccaagacacttagtatt
ccctagtcaaacccaaggaaaagacaaacatgtctcgagaaaagttacat
acaggccccagtctccacttttatttctaaggtctgtgattagaacagta
gacatcttttgcatgtccttaatacaggtatttttttctcttttagaaca
ttaatagtgatgtggagattacttcctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_91854418_91854925
seq2: B6Ng01-182P14.b_43_550 (reverse)

seq1  CCAACTCCACTTCCCATGCCCTAACAAAACTCTATTCCATACTATATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCCACTTCCCATGCCCTAACAAAACTCTATTCCATACTATATCCA  50

seq1  TCACATGGCTGTACCTCAGGGGGAAGTGATGCCTCAGCGTGGGCTCATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGGCTGTACCTCAGGGGGAAGTGATGCCTCAGCGTGGGCTCATTA  100

seq1  TGGCACCCCTCCCACCCTCACCATACTGTCGCGCCTCTACCAAAGCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCCCTCCCACCCTCACCATACTGTCGCGCCTCTACCAAAGCATAT  150

seq1  CCTTCGCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  200

seq1  CTCTCTCTCTCTCTAAAACATAGCACATACTATACTTTTTGGAGTAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTAAAACATAGCACATACTATACTTTTTGGAGTAAGTA  250

seq1  CTAAACAAATAAGACTCTGGTTAGAAAATACCTATCAATCACAAGGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAATAAGACTCTGGTTAGAAAATACCTATCAATCACAAGGCTTC  300

seq1  CTGTAGAGCAATACTGCGAGAGGAAGGAAACTCTCTGGGTTTAAAGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAGCAATACTGCGAGAGGAAGGAAACTCTCTGGGTTTAAAGGGCT  350

seq1  ATCATGTGAAATATAGGTGCAATTCTTGAATCAACCAGCAGAGGGCGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTGAAATATAGGTGCAATTCTTGAATCAACCAGCAGAGGGCGAGT  400

seq1  AAGGACTGCCTGGATTCAGGTTTTTTTGGGTTTTGTTTTGTTTTGTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTGCCTGGATTCAGGTTTTTTTGGGTTTTGTTTTGTTTTGTTTTG  450

seq1  TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGGGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGGGGGGG  500

seq1  CAGAATTC  508
      ||||||||
seq2  CAGAATTC  508

seq1: chr3_91718398_91719169
seq2: B6Ng01-182P14.g_64_843

seq1  GAATTCAGAGAATTGGTGAGAAGTGAATTTCCAAATTTTTACAGGGTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAATTGGTGAGAAGTGAATTTCCAAATTTTTACAGGGTAGG  50

seq1  TCTTCTTCCTGTATATGGTGTTTATGTATGCAACAAAGAGAAAGTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCCTGTATATGGTGTTTATGTATGCAACAAAGAGAAAGTTAAAA  100

seq1  CTCCATTCAGGGTGACTTTGGTGGTCATATTTATTTATTGATACTTAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTCAGGGTGACTTTGGTGGTCATATTTATTTATTGATACTTAGGA  150

seq1  ATCTGCTGCTAGACTGTAATGTGAGATCCCATGTTCTAGACCTTAGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTGCTAGACTGTAATGTGAGATCCCATGTTCTAGACCTTAGGTAT  200

seq1  AGAGTTATTCACCTGTGACAGAGAGGAACAAATTGAAAAACAGAGTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTATTCACCTGTGACAGAGAGGAACAAATTGAAAAACAGAGTTATA  250

seq1  TTCAGTGCCCTATTTGCCGGGAGGATATATTGGGTCTGATTTTCTTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGCCCTATTTGCCGGGAGGATATATTGGGTCTGATTTTCTTGTGT  300

seq1  GTGTGGGTTTTTTTTGTATTTGTTTTTTGTTTGCCTGATCATTCATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGTTTTTTTTGTATTTGTTTTTTGTTTGCCTGATCATTCATTGTT  350

seq1  GATCAATCAAAGCTGAGTGGCAATGGTAAAAGAGATGGACTTTTCACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATCAAAGCTGAGTGGCAATGGTAAAAGAGATGGACTTTTCACTTT  400

seq1  AAGGTTGGAACAGTTGAGCTAAGTCCATGTTCTTATAAAATGACACATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGGAACAGTTGAGCTAAGTCCATGTTCTTATAAAATGACACATTC  450

seq1  TAAGATGGTGATTGACTAGGCAGTAGAGGAATACTAAGCTTCAAAGGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGGTGATTGACTAGGCAGTAGAGGAATACTAAGCTTCAAAGGGGA  500

seq1  TTTGTGATAGTCCTAGGTTCCTTTTATTCTAGAGATCTAGGGTAGAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATAGTCCTAGGTTCCTTTTATTCTAGAGATCTAGGGTAGAAAAT  550

seq1  TCAAG-AAAAAGGAACATAAGG-AAACCACATTCCAAGACACTTAGTATT  598
      ||||| |||||||||||||||| |||||||||||||||||||||||||||
seq2  TCAAGAAAAAAGGAACATAAGGAAAACCACATTCCAAGACACTTAGTATT  600

seq1  CCCTAGTCAAACCCAAGG-AAAGACAAACATGTCTCGAGAAAAGTTACAT  647
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCTAGTCAAACCCAAGGAAAAGACAAACATGTCTCGAGAAAAGTTACAT  650

seq1  ACAGGCCCCAGTCTCCAC-TTTATTTCTAAGGTCTGTGATTAGAACAGTA  696
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACAGGCCCCAGTCTCCACTTTTATTTCTAAGGTCTGTGATTAGAACAGTA  700

seq1  GACATC-TTTGCATGTCCTTAATACAGGTA--TTTTTCTCTTTTAGAACA  743
      |||||| |||||||||||||||||||||||  ||||||||||||||||||
seq2  GACATCTTTTGCATGTCCTTAATACAGGTATTTTTTTCTCTTTTAGAACA  750

seq1  GTAATAGTGATGTGGAGATTACTT-CTATT  772
       ||||||||||||||||||||||| |||||
seq2  TTAATAGTGATGTGGAGATTACTTCCTATT  780