BAC Information

Click to search

BAC

Clone NameB6Ng01-183F22
Chromosome3 (Build37)
Map Location 49,401,332 - 49,402,306
singlet/doubletsinglet
Overlap genenone
Upstream gene1700018B24Rik, LOC100039404, EG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579
Downstream geneLOC100039587, LOC638779, Pcdh18, LOC100039628, LOC639469, Slc7a11, EG621304, LOC100039667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183F22.bB6Ng01-183F22.g
ACCGA009012GA009013
length869975
definitionB6Ng01-183F22.b B6Ng01-183F22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaagattaaatctctgagttcaaggtcatctgagattaaagg
tatggtggaacacacctttaatctgggatacaccttctgctgaagaccat
ataaggacattggaaaaagggagtcttgctcttgcttcctcgcctgcttg
ccctgtgggactgagtaactgcttgatccttggacttccattcacagcta
ctactgaaccattgttgggaattagactgcagactgtaagtcatcaataa
attcctttactatatagagactatccataagttctgtgactctagataag
atacaacttgccaaacgcatgaaattcaaggagaacgaagactaaagtgt
ggacactttaccctttcttagaaatgggaacaaaacacccatggaaggag
ttacagagacaaaatttggagctgtgacgaaaggatggaccatctagtga
tttccatatgcagggatccatcccataatcagcttccaaatgctgacacc
attgcatacactagcaagattttgctgaaaggacccagatatagctatct
cttgtgagactatgccggggcctagcaaacacagaagtggatgatcacag
tcagctattgggtggatcacacggcccccaatggaagagctagagaaatt
acccaaggagctaaagggaactgcaaccctataggtggaacaacaatatg
aactaaccagtaccccggagctcttgtctctagctgcatatgtatcaaaa
gatggcctagtcggccatcactgtaaagagaggcccattggacttgcaaa
cttttatatgccccagtacagggggaacgccagaagccaaaaaagggggg
agtgggtgggtagggggtt
gaattcaacagatatttgcagagttatgtgagggttagacaagaaatgta
ccatgtaaagttgtgtttcaaataacagaatgcttttaagacatttattc
caatttttataatgctttatttctgtgctgcaaatcagcctgtttaaaaa
aaaaactattgccctttaaaaaaatataaacttcccttaccttaaagaca
ctacaagttagcttccactgtcccgttcttaaaagatcactggacaagga
cattatgcggataagcagttttttttctctcttctcagtgtgcctaaaat
gctgtaattatctgtggtggtcctacaaatccagtatttaccacatgcat
gccttagatggtgaagtaattgcgtctgtcagacaagagacaaaaaaatt
tctttttttctgcgagctacttttttatatcattgaatttgttctttgga
agaaagatatagacataatatcctccaaatgcatgacatcatagagtaca
gtactttggagtgtagcagttgccattttcccatttttattgagtacaat
ggggccaatgatatagtcagtatgttttgggattttatatgcattgtgaa
tttattatctgagtgactttcatatgaatattgtttttcatggtatttca
tataaaattaaactaatttcatggcatacagcctaatttaaaagcattct
tacctcttctatgctccctgaagcacaaattcaaggatattaaaaatgtg
ttccatcaggaaattatagagaaagaaaagtatgtcaataaaatgtcttg
aagttattgtcaggggactgtactttttcatttgcaattaattttcatag
tataaaatgtgcgtgtgtgtgtgcacgtgtgtgtgtgagtgcgcgcgcgc
atgtgtgctcatgcacattctctctcatacacacacacatacacagagag
aggggcagcagggggtgggggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_49401332_49402306
seq2: B6Ng01-183F22.g_69_1043 (reverse)

seq1  TCTTCCTCCCCACCCCTGCTGCCCCTCTCTCTGTGTATGTGTGTGTGTAT  50
      |||||| |||  ||||||||||||||||||||||||||||||||||||||
seq2  TCTTCC-CCCACCCCCTGCTGCCCCTCTCTCTGTGTATGTGTGTGTGTAT  49

seq1  GAGAGAGAATGTGCATGAGCACACATGCGCGCGCGCACTCACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAATGTGCATGAGCACACATGCGCGCGCGCACTCACACACACAC  99

seq1  GTGCACACACACACGCACA-TTTATACTATGAAAATTAATTGCAAATGAA  149
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTGCACACACACACGCACATTTTATACTATGAAAATTAATTGCAAATGAA  149

seq1  AAAGTACAGTCCCCTGACAATAACTTCAAGACATTTTATTGACATACTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACAGTCCCCTGACAATAACTTCAAGACATTTTATTGACATACTTT  199

seq1  TCTTTCTCTATAATTTCCTGATGGAACACATTTTTAATATCCTTGAATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCTATAATTTCCTGATGGAACACATTTTTAATATCCTTGAATTT  249

seq1  GTGCTTCAGGGAGCATAGAAGAGGTAAGAATGCTTTTAAATTAGGCTGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCAGGGAGCATAGAAGAGGTAAGAATGCTTTTAAATTAGGCTGTA  299

seq1  TGCCATGAAATTAGTTTAATTTTATATGAAATACCATGAAAAACAATATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGAAATTAGTTTAATTTTATATGAAATACCATGAAAAACAATATT  349

seq1  CATATGAAAGTCACTCAGATAATAAATTCACAATGCATATAAAATCCCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAAAGTCACTCAGATAATAAATTCACAATGCATATAAAATCCCAA  399

seq1  AACATACTGACTATATCATTGGCCCCATTGTACTCAATAAAAATGGGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACTGACTATATCATTGGCCCCATTGTACTCAATAAAAATGGGAAA  449

seq1  ATGGCAACTGCTACACTCCAAAGTACTGTACTCTATGATGTCATGCATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAACTGCTACACTCCAAAGTACTGTACTCTATGATGTCATGCATTT  499

seq1  GGAGGATATTATGTCTATATCTTTCTTCCAAAGAACAAATTCAATGATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATATTATGTCTATATCTTTCTTCCAAAGAACAAATTCAATGATAT  549

seq1  AAAAAAGTAGCTCGCAGAAAAAAAGAAATTTTTTTGTCTCTTGTCTGACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTAGCTCGCAGAAAAAAAGAAATTTTTTTGTCTCTTGTCTGACA  599

seq1  GACGCAATTACTTCACCATCTAAGGCATGCATGTGGTAAATACTGGATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCAATTACTTCACCATCTAAGGCATGCATGTGGTAAATACTGGATTT  649

seq1  GTAGGACCACCACAGATAATTACAGCATTTTAGGCACACTGAGAAGAGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGACCACCACAGATAATTACAGCATTTTAGGCACACTGAGAAGAGAG  699

seq1  AAAAAAAACTGCTTATCCGCATAATGTCCTTGTCCAGTGATCTTTTAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACTGCTTATCCGCATAATGTCCTTGTCCAGTGATCTTTTAAGA  749

seq1  ACGGGACAGTGGAAGCTAACTTGTAGTGTCTTTAAGGTAAGGGAAGTTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGACAGTGGAAGCTAACTTGTAGTGTCTTTAAGGTAAGGGAAGTTTA  799

seq1  TATTTTTTTAAAGGGCAATAGTTTTTTTTTTAAACAGGCTGATTTGCAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTAAAGGGCAATAGTTTTTTTTTTAAACAGGCTGATTTGCAGC  849

seq1  ACAGAAATAAAGCATTATAAAAATTGGAATAAATGTCTTAAAAGCATTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATAAAGCATTATAAAAATTGGAATAAATGTCTTAAAAGCATTCT  899

seq1  GTTATTTGAAACACAACTTTACATGGTACATTTCTTGTCTAACCCTCACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTGAAACACAACTTTACATGGTACATTTCTTGTCTAACCCTCACA  949

seq1  TAACTCTGCAAATATCTGTTGAATTC  975
      ||||||||||||||||||||||||||
seq2  TAACTCTGCAAATATCTGTTGAATTC  975