BAC Information

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BAC

Clone NameB6Ng01-183I24
Chromosome3 (Build37)
Map Location 82,104,229 - 82,105,326
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC229443, LOC100041901, Ctso, Tdo2, Accn5, Gucy1b3, Gucy1a3
Downstream geneMtap9, Npy2r, LOC100041940, EG633285, Lrat, Fgg, Fga, Fgb, Plrg1, EG627094, Dchs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183I24.bB6Ng01-183I24.g
ACCGA009154GA009155
length1,101931
definitionB6Ng01-183I24.b B6Ng01-183I24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagtctgtgaagtcaatgctgcagtctagctgatccctgaaag
ctgcactggggaaaaccacagatatctctctgcctagaccctccagaggg
ggtggcattgtgctgataccttatgtaagccactggaattcttctctgag
gaattctcttgattaggtcaggtgaggaggcccatcctgattatgggtgg
tatacttcatggctggcctccagcactggaaaggaggttgctatggttcc
agtcaacaagtttgttatatcagccacaggaagcctatgtgtaaccattg
aggacacaagtagagctctacaaaagaggtgccttgaataggtgatggtg
tctcctcagatagaaatgaaggctgagaaggatggctcagagctaggaaa
gcactacaggaaatcactgatgtgagtaataccaaaccaggtggcatctc
ctatctgttattgctgcaaattacaggagaagttaaaagcaaagacaggc
tcttcacaggtagtgatggataaagaatatgctatagacacagatgggct
gtgtgcctgtggaattcagggatgctcaccctcagttatgctatcctcac
atagcatatttccttttttattagatattttttatttacatttcaaatgc
tatcccctttcctagtttcccttcagaaaaccccctatcccctcccccct
cctcctgctcaccaacccacccactcctgcttcctgggcctggcattccc
ctatactggggcacagaaccatcagaagaccaaaggtctctcctcccatt
gatgatcaactgggccatcctctgctacatatgcagctagagccatgagt
cccatcaggtgttttctctgttgttgatttagtcccaggaagctctgggg
gtactggttagttcatattgatgttcctccttgtggctacaaacaccttc
agcaccttgggtacttttctctaactccttcattgggggtcctgtgttcc
aatcccaatgggatggctctgacatccacttccggtatttgtcagcactg
gcagaagcctcacagaaaacacctatatcagatcctgtcagcaaaatctt
g
gaattcttttagagaagttaggtgttaatttaataggtctaccttcatat
gatatttgttctttataacctattatcttttaatattctttcctttttcc
tgtacatttagggccttgattattaggtaccgaggagatgttcttttctg
gtccagttcatttggtattctatatgcttcctgtatcttgataggtattt
cctttttagattagggatattttattctataattttgttgaagatttttt
ttttgtgtgccttcgatctgtgttttttctcctttgtatatacctattat
tcttagatttaccccccaccccaccagagtcctatgtattcaaaatggtt
tttgacaggatttttagatttaacaacttccctgactgagttctccattt
ctcctactgtaccttcaatgtctgagattctcacttgcatctcttgtttt
ctgttgttaaggatagccaactcttattcgagttcctaaaatttgcatgt
ccatatttccaaaagtttgggttttctttattgactctacttctactttc
aggttttgaactgttctgttcatttccttcgactgtgtttgcttagaagg
acttattcatttcctctttaaggacctcagccacattcataaagggctgt
tttaacatatttgtcttgttattcagttaggttgcagctctcagggcctg
ctgcgggaagattgtgtcctctagtggagacttaatatcctgactgttaa
tagttgagttcttatgctggtgtctcagtgtctggccttgggaagatggt
aattctaggtgctaatatatagtcttgactttcttggggtagggtggggg
tttttattcttgatttttattgccctctccgggttctaaaaaggtctgtg
gtggcttatgtgttactcggcagtgtaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_82104229_82105326
seq2: B6Ng01-183I24.b_46_1146

seq1  GAATTCTGAGTCTGTGAAGTCAATGCTGCAGTCTAGCTGATCCCTGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTCTGTGAAGTCAATGCTGCAGTCTAGCTGATCCCTGAAAG  50

seq1  CTGCACTGGGGAAAACCACAGATATCTCTCTGCCTAGACCCTCCAGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGGGGAAAACCACAGATATCTCTCTGCCTAGACCCTCCAGAGGG  100

seq1  GGTGGCATTGTGCTGATACCTTATGTAAGCCACTGGAATTCTTCTCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCATTGTGCTGATACCTTATGTAAGCCACTGGAATTCTTCTCTGAG  150

seq1  GAATTCTCTTGATTAGGTCAGGTGAGGAGGCCCATCCTGATTATGGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGATTAGGTCAGGTGAGGAGGCCCATCCTGATTATGGGTGG  200

seq1  TATACTTCATGGCTGGCCTCCAGCACTGGAAAGGAGGTTGCTATGGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCATGGCTGGCCTCCAGCACTGGAAAGGAGGTTGCTATGGTTCC  250

seq1  AGTCAACAAGTTTGTTATATCAGCCACAGGAAGCCTATGTGTAACCATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACAAGTTTGTTATATCAGCCACAGGAAGCCTATGTGTAACCATTG  300

seq1  AGGACACAAGTAGAGCTCTACAAAAGAGGTGCCTTGAATAGGTGATGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACAAGTAGAGCTCTACAAAAGAGGTGCCTTGAATAGGTGATGGTG  350

seq1  TCTCCTCAGATAGAAATGAAGGCTGAGAAGGATGGCTCAGAGCTAGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCAGATAGAAATGAAGGCTGAGAAGGATGGCTCAGAGCTAGGAAA  400

seq1  GCACTACAGGAAATCACTGATGTGAGTAATACCAAACCAGGTGGCATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTACAGGAAATCACTGATGTGAGTAATACCAAACCAGGTGGCATCTC  450

seq1  CTATCTGTTATTGCTGCAAATTACAGGAGAAGTTAAAAGCAAAGACAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGTTATTGCTGCAAATTACAGGAGAAGTTAAAAGCAAAGACAGGC  500

seq1  TCTTCACAGGTAGTGATGGATAAAGAATATGCTATAGACACAGATGGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACAGGTAGTGATGGATAAAGAATATGCTATAGACACAGATGGGCT  550

seq1  GTGTGCCTGTGGAATTCAGGGATGCTCACCCTCAGTTATGCTATCCTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTGTGGAATTCAGGGATGCTCACCCTCAGTTATGCTATCCTCAC  600

seq1  ATAGCATATTTCCTTTTTTATTAGATATTTTTTATTTACATTTCAAATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATATTTCCTTTTTTATTAGATATTTTTTATTTACATTTCAAATGC  650

seq1  TATCCCCTTTCCTAGTTTCCCTTCAGAAAACCCCCTATCCCCTCCCCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCTTTCCTAGTTTCCCTTCAGAAAACCCCCTATCCCCTCCCCCCT  700

seq1  CCTCCTGCTCACCAACCCACCCACTCCTGCTTCCTGGGCCTGGCATTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCTCACCAACCCACCCACTCCTGCTTCCTGGGCCTGGCATTCCC  750

seq1  CTATACTGGGGCACAGAACCATCAGAAGACCAAAGGTCTCTCCTCCCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTGGGGCACAGAACCATCAGAAGACCAAAGGTCTCTCCTCCCATT  800

seq1  GATGATCAACTGGGCCATCCTCTGCTACATATGCAGCTAGAGCCATGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCAACTGGGCCATCCTCTGCTACATATGCAGCTAGAGCCATGAGT  850

seq1  CCCATCAGGTGTTTTCTCTGTTGTTGATTTAGTCCCAGGAAGCTCTGGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAGGTGTTTTCTCTGTTGTTGATTTAGTCCCAGGAAGCTCTGGGG  900

seq1  GTACTGGTTAGTTCATATTGATGTTCCTCCTTGTGGCTACAAACACCTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGTTAGTTCATATTGATGTTCCTCCTTGTGGCTACAAACACCTTC  950

seq1  AGCACCTTGGGTAC-TTTCTCTAACTCCTTCATTGGGGGTCCTGTGTTCC  999
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCACCTTGGGTACTTTTCTCTAACTCCTTCATTGGGGGTCCTGTGTTCC  1000

seq1  A--TCCAAT-GGATGGCTCTGAACATCCACTT-CGGTATTTGTCAGGCAC  1045
      |   ||||| ||||||||||| |||||||||| |||||||||||| ||||
seq2  AATCCCAATGGGATGGCTCTG-ACATCCACTTCCGGTATTTGTCA-GCAC  1048

seq1  TGGCAG-AGCCTCACAGGAAACAACTATATCAGGTTCCTGTCAGCAAAAT  1094
      |||||| |||||||||| ||||| |||||||| | |||||||||||||||
seq2  TGGCAGAAGCCTCACAGAAAACACCTATATCA-GATCCTGTCAGCAAAAT  1097

seq1  CTTG  1098
      ||||
seq2  CTTG  1101