BAC Information

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BAC

Clone NameB6Ng01-184N06
Chromosome3 (Build37)
Map Location 64,060,303 - 64,194,943
singlet/doubletdoublet
Overlap gene4930518C23Rik, EG637004, EG667031, EG637053
Upstream geneMme, Plch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, LOC380739
Downstream geneLOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110, Kcnab1, Ssr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184N06.bB6Ng01-184N06.g
ACCGA010105GA010106
length1,211306
definitionB6Ng01-184N06.b B6Ng01-184N06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,193,748 - 64,194,943)(64,060,303 - 64,060,607)
sequence
gaattctccagggacagcccatatgctgctttgattgcatcccatgtact
gatggatatgtgtcagagaaaccaggtagagacagtcaatttctataaat
agtcattcagttagattatttattttctgacaaagacaaccttggaatcc
tttgttattaatgatacaagcaatgcatggcaaagtaattaacatctatc
aagttattaaatgtttttttgcagtgtgaatgaagaataatactgttttt
cctactgcagttggaaaagacttacaacaatgcgcataaggaaataccaa
tgaaaacacatgaaatgggaaatatgaataaaatcataaaatcttctaag
tacatgtttttgaactttactgaaaactaactaggagacagtcctaaaat
tgtcttaaggttccaagaattgaaggcacatgcattgcacagtgactgag
acttggactgctgtgacagcttgctcagtagaggtgacatagacaggttt
ggtttctagaaatatgttagtgtaggtttatttacatttctattcagttt
tgttgaagaaactaataaatcacttgtctttttcacataacccacaagag
taatcatgtaaaatgataagatggtctgggatggaaagaagcacactgta
agctacacaactcccttgctaaaggtcccacagtctctacaaagaattcc
atccagaacagtccagaccaggagacagaggagttgaaagtaaatgtggt
ttgatctgaatctttaattaacactgagtcaaactattccatcatctgcc
ataacctcacctcaactagcttttccttcttcacccatgcttacttttag
aagcctccctccagatgtagctttcttcactcagggaccagaattgatgt
ggttttccttcctatcatcatcctcatctcaatgaatgaacatctagagt
tgggcccatttgagtaggcaaattcatgagttcttcctcctatgagggga
taattacctggagaggatttaaaatgctagggtattaacctgatgtgtgc
cagtccttttgattgcttcattattcaaaaggcttatgattttctcattc
ctgggctgatttcgatttggataaagaccagtccactattcccacatata
gaggagaaagaacgggacatctctcaatgaaaaaaatcattccaagaaca
cgctctaagtt
cttcatgttctctgcatcccttcctgactctagattcctgtgcactcctg
acctgaaatccctcaatgatggagtgttacctgtcagctgttaggtacaa
taaagcctgtctacccaaagttgcttctggtcattgatttttaaccacaa
cagagaaacaaactagcaaacaagtaaatgataggaatatttgagtgttg
tagaagtggagttgggttgtgtgaaatggttttgagtataaaagggcaac
tattgaaaacaggaagtagtttgaagagtgtggcggatagccctggtggc
ttattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64193748_64194943
seq2: B6Ng01-184N06.b_45_1255 (reverse)

seq1  AACTT-GAGC-TGTTCTTGAATATTTTTTTTTCTATTGA-TGATGT-CCT  46
      ||||| |||| |||||||| | ||  ||||||  |||||  ||||| || 
seq2  AACTTAGAGCGTGTTCTTGGA-ATGATTTTTTTCATTGAGAGATGTCCCG  49

seq1  TTCTTTCTCCTCTATATGT-GGAATAGTGGACTGTGTCTTTAT-CAAATC  94
      ||||||||||||||||||| |||||||||||||| |||||||| ||||||
seq2  TTCTTTCTCCTCTATATGTGGGAATAGTGGACTG-GTCTTTATCCAAATC  98

seq1  GAAATCAGCCCAGGAATGAGAAAATCATA--GCTTTTGA--TATGAAGCA  140
      |||||||||||||||||||||||||||||   |||||||   ||||||||
seq2  GAAATCAGCCCAGGAATGAGAAAATCATAAGCCTTTTGAATAATGAAGCA  148

seq1  ATCAAAAGGACTGGCACACATCAGGTTAATACCCTAGCATTTT-CATTCT  189
      |||||||||||||||||||||||||||||||||||||||||||  || ||
seq2  ATCAAAAGGACTGGCACACATCAGGTTAATACCCTAGCATTTTAAATCCT  198

seq1  CT-CAGGTAA-TATCCCCTCATA-GAGGA--GACTCATGAATTTGCCTAC  234
      || ||||||| |||||||||||| |||||   ||||||||||||||||||
seq2  CTCCAGGTAATTATCCCCTCATAGGAGGAAGAACTCATGAATTTGCCTAC  248

seq1  TCAAATGGGCCCAACTCTAGATGTTCATTCATTGAGATGAGGATGATGAT  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGGGCCCAACTCTAGATGTTCATTCATTGAGATGAGGATGATGAT  298

seq1  AGGAAGGAAAACAACATCAATTCTGGTCCCTGAGTGAAGAAAGCTACATC  334
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAAACCACATCAATTCTGGTCCCTGAGTGAAGAAAGCTACATC  348

seq1  TGGAGGGAGGC-TCTAAAAGTAAGCATTGGTGAAGAAGGAAAAGCTAGTT  383
      ||||||||||| ||||||||||||||| ||||||||||||||||||||||
seq2  TGGAGGGAGGCTTCTAAAAGTAAGCATGGGTGAAGAAGGAAAAGCTAGTT  398

seq1  GAGGTGAGGTTATGGCAGATGATGGAATAGTTTGACTCAGTGTTAATTAA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGAGGTTATGGCAGATGATGGAATAGTTTGACTCAGTGTTAATTAA  448

seq1  AGATTCAGATCAAACCACATTTACTTTCAACTCCTCTGTCTCCTGGTCTG  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAGATCAAACCACATTTACTTTCAACTCCTCTGTCTCCTGGTCTG  498

seq1  GACTGTTCTGGATGGAATTCTTTGTAGAGACTGTGGGACCTTTAGCAAGG  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTCTGGATGGAATTCTTTGTAGAGACTGTGGGACCTTTAGCAAGG  548

seq1  GAGTTGTGTAGCTTACAGTGTGCTTCTTTCCATCCCAGACCATCTTATCA  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTGTAGCTTACAGTGTGCTTCTTTCCATCCCAGACCATCTTATCA  598

seq1  TTTTACATGATTACTCTTGTGGGTTATGTGAAAAAGACAAGTGATTTATT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATGATTACTCTTGTGGGTTATGTGAAAAAGACAAGTGATTTATT  648

seq1  AGTTTCTTCAACAAAACTGAATAGAAATGTAAATAAACCTACACTAACAT  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTCAACAAAACTGAATAGAAATGTAAATAAACCTACACTAACAT  698

seq1  ATTTCTAGAAACCAAACCTGTCTATGTCACCTCTACTGAGCAAGCTGTCA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAGAAACCAAACCTGTCTATGTCACCTCTACTGAGCAAGCTGTCA  748

seq1  CAGCAGTCCAAGTCTCAGTCACTGTGCAATGCATGTGCCTTCAATTCTTG  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTCCAAGTCTCAGTCACTGTGCAATGCATGTGCCTTCAATTCTTG  798

seq1  GAACCTTAAGACAATTTTAGGACTGTCTCCTAGTTAGTTTTCAGTAAAGT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTAAGACAATTTTAGGACTGTCTCCTAGTTAGTTTTCAGTAAAGT  848

seq1  TCAAAAACATGTACTTAGAAGATTTTATGATTTTATTCATATTTCCCATT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACATGTACTTAGAAGATTTTATGATTTTATTCATATTTCCCATT  898

seq1  TCATGTGTTTTCATTGGTATTTCCTTATGCGCATTGTTGTAAGTCTTTTC  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTTTTCATTGGTATTTCCTTATGCGCATTGTTGTAAGTCTTTTC  948

seq1  CAACTGCAGTAGGAAAAACAGTATTATTCTTCATTCACACTGCAAAAAAA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCAGTAGGAAAAACAGTATTATTCTTCATTCACACTGCAAAAAAA  998

seq1  CATTTAATAACTTGATAGATGTTAATTACTTTGCCATGCATTGCTTGTAT  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATAACTTGATAGATGTTAATTACTTTGCCATGCATTGCTTGTAT  1048

seq1  CATTAATAACAAAGGATTCCAAGGTTGTCTTTGTCAGAAAATAAATAATC  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATAACAAAGGATTCCAAGGTTGTCTTTGTCAGAAAATAAATAATC  1098

seq1  TAACTGAATGACTATTTATAGAAATTGACTGTCTCTACCTGGTTTCTCTG  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAATGACTATTTATAGAAATTGACTGTCTCTACCTGGTTTCTCTG  1148

seq1  ACACATATCCATCAGTACATGGGATGCAATCAAAGCAGCATATGGGCTGT  1183
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATCCATCAGTACATGGGATGCAATCAAAGCAGCATATGGGCTGT  1198

seq1  CCCTGGAGAATTC  1196
      |||||||||||||
seq2  CCCTGGAGAATTC  1211

seq1: chr3_64060303_64060607
seq2: B6Ng01-184N06.g_73_378

seq1  CTTCATGTTCTCTGCATCCCTTCCTGACTCTAGATTCCTGTGCACTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGTTCTCTGCATCCCTTCCTGACTCTAGATTCCTGTGCACTCCTG  50

seq1  ACCTGAAATCCCTCAATGATGGAGTGTTACCTGTCAGCTGTTAGGTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAATCCCTCAATGATGGAGTGTTACCTGTCAGCTGTTAGGTACAA  100

seq1  TAAAGCCTGTCTACCCAAAGTTGCTTCTGGTCATTGATTTTTAACCACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCTGTCTACCCAAAGTTGCTTCTGGTCATTGATTTTTAACCACAA  150

seq1  CAGAGAAACAAACTAGCAAACAAGTAAATGATAGGAATATTTGAGTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACAAACTAGCAAACAAGTAAATGATAGGAATATTTGAGTGTTG  200

seq1  TAGAAGTGGAGTTGGGTTGTGTGAAATGGTTTTGAGTATAAAAGGGCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTGGAGTTGGGTTGTGTGAAATGGTTTTGAGTATAAAAGGGCAAC  250

seq1  TATTGAAAACAGGAAGTAGTTTGAAGAGTGTGGTGGATAGCCCTGG-GGC  299
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  TATTGAAAACAGGAAGTAGTTTGAAGAGTGTGGCGGATAGCCCTGGTGGC  300

seq1  TAATTG  305
      | ||||
seq2  TTATTG  306