BAC Information

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BAC

Clone NameB6Ng01-185A03
Chromosome3 (Build37)
Map Location 115,149,502 - 115,308,468
singlet/doubletdoublet
Overlap geneEG546808
Upstream geneLOC100043220, Olfm3
Downstream geneEdg1, Dph5, LOC626061, Slc30a7, Extl2, Vcam1, Gpr88, Cdc14a, Rtcd1, Dbt, LOC100043702, LOC100043705, Lrrc39, A930028L21Rik, Sass6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185A03.bB6Ng01-185A03.g
ACCGA010235GA010236
length307789
definitionB6Ng01-185A03.b B6Ng01-185A03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,149,502 - 115,149,799)(115,307,681 - 115,308,468)
sequence
tcagtactggaatatcaaatagttaagaaacacttaaagaaatgttcaac
atccttagccatcagagaaatgcaaatcaaaacaactctgaggttccatc
ttataccttaggtgtttgttgttatgtctccgtgtcatatgaacttttaa
acctgaacagaaatactgcagttaacaaatgttgtaaaccaaacggactt
agctagtatttatagaacatctcaccaaacacacacacacacacacacac
acacacacacacacacagagagagggggaagggaggagggagagacagag
agacaga
gaattcctgtacagccactgggagttttagtccaacaatagacttaaaac
cttgtgtcttgcaataatttcaccctgtggaagtctgaagatacaatgcc
ctgcaactttggagttcatgatgatgagcaaagaggagacaataaaagga
aagtgacagggatgtgttgtttaaagaaaaatcaccatcattgcagagtt
tggggtagtcaagaatgccagtcattgctgctagatgtacccactagact
tggggagctcagattgaatattgggaagagaaaacaggtatgaatacaag
catcaaaaatactctagctgggcgagacatagtgagatcataatcctaat
gttataataacagttgactcttaaaagggtgtaaagagaaacccacagga
aggatcacagacatggagggagggatgcacagccacgagtgaatagaaga
gtggtataaatcaataagtaacatgctggcaaagcagtgggcaagaatgc
cctgagactctcccaaacgccaagggtcagagagcaagcttcaattttga
ttgaatgtgtgggagacaaaaaaaattacaagggctgcttttgacctccc
tgcagcctgtctcttgaaacagatggtatagtgctgactgtggacaataa
agagaatgcaaagcggtttggtcctgttttgctttgcatattcattgccc
acaaaaaaaaaatcagtttgaaattggaaactagcaacattgcgatcctt
accaggtcaactctgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_115149502_115149799
seq2: B6Ng01-185A03.b_31_328

seq1  GAATTCTCAGTACTGGAATATCAAATAGTTAAGAAACACTTAAAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTACTGGAATATCAAATAGTTAAGAAACACTTAAAGAAATG  50

seq1  TTCAACATCCTTAGCCATCAGAGAAATGCAAATCAAAACAACTCTGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAGCCATCAGAGAAATGCAAATCAAAACAACTCTGAGGT  100

seq1  TCCATCTTATACCTTAGGTGTTTGTTGTTATGTCTCCGTGTCATATGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTTATACCTTAGGTGTTTGTTGTTATGTCTCCGTGTCATATGAAC  150

seq1  TTTTAAACCTGAACAGAAATACTGCAGTTAACAAATGTTGTAAACCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACCTGAACAGAAATACTGCAGTTAACAAATGTTGTAAACCAAAC  200

seq1  GGACTTAGCTAGTATTTATAGAACATCTCACCAAACACACACACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTAGCTAGTATTTATAGAACATCTCACCAAACACACACACACACAC  250

seq1  ACACACACACACACACACACACAGAGAGAGGGGGAAGGGAGGAGGGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACAGAGAGAGGGGGAAGGGAGGAGGGAG  298

seq1: chr3_115307681_115308468
seq2: B6Ng01-185A03.g_65_853 (reverse)

seq1  CACACACACACACACACACACACACAGAGTTGACCTGGTAAGGATCGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACAGAGTTGACCTGGTAAGGATCGCAA  50

seq1  TGTTGCTAGTTTCCAATTTCAAACTGATTTTTTTTTTGTGGGCAATGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTAGTTTCCAATTTCAAACTGATTTTTTTTTTGTGGGCAATGAAT  100

seq1  ATGC-AAGCAAAACAGGACCAAACCGCTTTGCATTCTCTTTATTGTCCAC  149
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAGCAAAACAGGACCAAACCGCTTTGCATTCTCTTTATTGTCCAC  150

seq1  AGTCAGCACTATACCATCTGTTTCAAGAGACAGGCTGCAGGGAGGTCAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCACTATACCATCTGTTTCAAGAGACAGGCTGCAGGGAGGTCAAA  200

seq1  AGCAGCCCTTGTAATTTTTTTTGTCTCCCACACATTCAATCAAAATTGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCCTTGTAATTTTTTTTGTCTCCCACACATTCAATCAAAATTGAA  250

seq1  GCTTGCTCTCTGACCCTTGGCGTTTGGGAGAGTCTCAGGGCATTCTTGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCTCTGACCCTTGGCGTTTGGGAGAGTCTCAGGGCATTCTTGCC  300

seq1  CACTGCTTTGCCAGCATGTTACTTATTGATTTATACCACTCTTCTATTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTTTGCCAGCATGTTACTTATTGATTTATACCACTCTTCTATTCA  350

seq1  CTCGTGGCTGTGCATCCCTCCCTCCATGTCTGTGATCCTTCCTGTGGGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGGCTGTGCATCCCTCCCTCCATGTCTGTGATCCTTCCTGTGGGTT  400

seq1  TCTCTTTACACCCTTTTAAGAGTCAACTGTTATTATAACATTAGGATTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTACACCCTTTTAAGAGTCAACTGTTATTATAACATTAGGATTAT  450

seq1  GATCTCACTATGTCTCGCCCAGCTAGAGTATTTTTGATGCTTGTATTCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCACTATGTCTCGCCCAGCTAGAGTATTTTTGATGCTTGTATTCAT  500

seq1  ACCTGTTTTCTCTTCCCAATATTCAATCTGAGCTCCCCAAGTCTAGTGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTTTCTCTTCCCAATATTCAATCTGAGCTCCCCAAGTCTAGTGGG  550

seq1  TACATCTAGCAGCAATGACTGGCATTCTTGACTACCCCAAACTCTGCAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTAGCAGCAATGACTGGCATTCTTGACTACCCCAAACTCTGCAAT  600

seq1  GATGGTGATTTTTCTTTAAACAACACATCCCTGTCACTTTCCTTTTATTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGATTTTTCTTTAAACAACACATCCCTGTCACTTTCCTTTTATTG  650

seq1  TCTCCTCTTTGCTCATCATCATGAACTCCAAAGTTGCAGGGCATTGTATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTTTGCTCATCATCATGAACTCCAAAGTTGCAGGGCATTGTATC  700

seq1  TTCAGACTTCCACAGGGTGAAATTATTGCAAGACACAAGGTTTTAAGTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACTTCCACAGGGTGAAATTATTGCAAGACACAAGGTTTTAAGTCT  750

seq1  ATTGTTGGACTAAAACTCCCAGTGGCTGTACAGGAATTC  788
      |||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGGACTAAAACTCCCAGTGGCTGTACAGGAATTC  789