BAC Information

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BAC

Clone NameB6Ng01-186L13
Chromosome3 (Build37)
Map Location 75,260,281 - 75,428,768
singlet/doubletdoublet
Overlap geneWdr49, Pdcd10, Serpini1
Upstream geneLOC100041551, EG667459, BC050789, Serpini2
Downstream geneGolph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186L13.bB6Ng01-186L13.g
ACCGA011489GA011490
length1,0841,015
definitionB6Ng01-186L13.b B6Ng01-186L13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,427,684 - 75,428,768)(75,260,281 - 75,261,289)
sequence
gaattcagcagaggcgcagaagctgtgatctcatgcagatggcttactta
ggagaggaaaattacattacttccttaacacaggcatggatgaggaggat
cccacagcctcacactctagttgcagtactgggtttaactacactgactg
taaagaagccttacaagtttattttatttcatttaaatatatatttgtct
tctcttattaaaaaaaacagattttgtattcccattgtaagaaacaaata
gaaaatcataattatataaccttagttatttaggcttaagcttattgttg
cctttatcaatggaaaatttatgttaatcacttaaaactatatccaaagc
tatttaatgatcttaaatgctttaatgtcaccaacaacttaactttgtcc
tccaataatttaacaaggttttttttttctagtatactttacaattactt
tttaaaaacattattttttactgaagacttaagaaaagttttacatctca
ctgggtagtttttcttctgtttaaaagaatctttggtttgtttctcacaa
ctagaggtattaattcatctttcccatataacttattctagtaagatata
tgttctattaaattagcatattcattgattatgtattctataagattaga
gggagaatatgaagaagtataaacaaagcattctggaaagcaatctacta
aaatggctcacaccaggatatatgcatattataactgtatctacagcttg
tataagtaaagatgccttttgcttcatttatttgataagtaatgcttatg
tataaaaaattcatgagaagtgattgacagaccatcattatcttgaagag
cgttttatgaataacattttaattgatatttattactaaccctgacatgg
cagtcaaatttgcatctttgatgaaaatttcagtgaccccaagggctttc
aagatgtcttttaaatcaatttcctgttccacagtgaacctggtggagat
attggagaaaatttgtagttacagcagcgtcttacctggacaggattata
tgtttagatataagggttatgacaaagtggtatt

gaattcagataaaacatatatgcagttgagaaacatgtaattattctacc
tagcataacattttaaaattatttgtcatgttgatttcctaagaaaacat
tcaggtactgactagtttagttttgttttggtttggtttggtttttttct
gagaatacctagaaaacatggttcttgattatctcacttcataaatttta
gactttagaaaatctgtcttcagaatatccttcaaatatagaacattata
agatcatttcatttttatatttatgaaaacagagctctgagcctcagtgt
taaactcttaaaaatattcccttttaaaggaacctgaaatctcatttttg
aaactaagaaaagattgtgtatttttaactggtaatggctaaaacttaaa
ctctctttaatgatcacttttctggtcatttttcaaggaaagaatcaaaa
ttaaaatgtattatctaccaaatgtcaccatgccatatacaaatagaggt
atctaaatagttttctttccttttgatttgtccacttacctcatacctgg
aaggtatacctctaaaatgtacacttacctctaccaccacaataccctat
ggagacatagataatttaaggggtctttattaataaacatttctactatt
ttcaatgtgctggttttatataaacaagcctacaaatacatctaagctca
attaagtaattaatttttaagaaaaaatttcctagaagcataatttctga
gacaaataatttatatgttcttttaatagacatttataattttattattt
gaggatttcatacctccatctattgacgttcaataacattcacaacccct
cccctcccctcccccacatcttttcccttcctgtgctttgtttcttaaac
tcactgagtttgctctttactgtctgtgtgggcatgaatgtaggacagtt
tgctggaatatgttcttctgagaacacaaggatttgttgtttgtgttgtg
gttgattgattgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75427684_75428768
seq2: B6Ng01-186L13.b_44_1127 (reverse)

seq1  AATA-CACTTTGTCATTAACCCTTATATCTAAACATATATCCTTGTTCCA  49
      |||| |||||||||| |||||||||||||||||||||||  | || ||||
seq2  AATACCACTTTGTCA-TAACCCTTATATCTAAACATATAATCCTG-TCCA  48

seq1  GGTAAGACGCTGCTGTAACTACAAATTTTCTTCCAATATCTCCACCAGGT  99
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGTAAGACGCTGCTGTAACTACAAATTTTC-TCCAATATCTCCACCAGGT  97

seq1  TCACTGTGGAACAGGAAATTGATTTAAAAGACATCTTGAAAGCCCTTGGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTGGAACAGGAAATTGATTTAAAAGACATCTTGAAAGCCCTTGGG  147

seq1  GTCACTGAAATTTTCATCAAAGATGCAAATTTGACTGCCATGTCA-GGTT  198
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTCACTGAAATTTTCATCAAAGATGCAAATTTGACTGCCATGTCAGGGTT  197

seq1  AGTAATAAATATCAATTAAAATGTTATTCATAAAACGCTCTTCAAGATAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAAATATCAATTAAAATGTTATTCATAAAACGCTCTTCAAGATAA  247

seq1  TGATGGTCTGTCAATCACTTCTCATGAATTTTTTATACATAAGCATTACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTCTGTCAATCACTTCTCATGAATTTTTTATACATAAGCATTACT  297

seq1  TATCAAATAAATGAAGCAAAAGGCATCTTTACTTATACAAGCTGTAGATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATAAATGAAGCAAAAGGCATCTTTACTTATACAAGCTGTAGATA  347

seq1  CAGTTATAATATGCATATATCCTGGTGTGAGCCATTTTAGTAGATTGCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATAATATGCATATATCCTGGTGTGAGCCATTTTAGTAGATTGCTT  397

seq1  TCCAGAATGCTTTGTTTATACTTCTTCATATTCTCCCTCTAATCTTATAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAATGCTTTGTTTATACTTCTTCATATTCTCCCTCTAATCTTATAG  447

seq1  AATACATAATCAATGAATATGCTAATTTAATAGAACATATATCTTACTAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATAATCAATGAATATGCTAATTTAATAGAACATATATCTTACTAG  497

seq1  AATAAGTTATATGGGAAAGATGAATTAATACCTCTAGTTGTGAGAAACAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTATATGGGAAAGATGAATTAATACCTCTAGTTGTGAGAAACAA  547

seq1  ACCAAAGATTCTTTTAAACAGAAGAAAAACTACCCAGTGAGATGTAAAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGATTCTTTTAAACAGAAGAAAAACTACCCAGTGAGATGTAAAAC  597

seq1  TTTTCTTAAGTCTTCAGTAAAAAATAATGTTTTTAAAAAGTAATTGTAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAAGTCTTCAGTAAAAAATAATGTTTTTAAAAAGTAATTGTAAA  647

seq1  GTATACTAGAAAAAAAAAACCTTGTTAAATTATTGGAGGACAAAGTTAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTAGAAAAAAAAAACCTTGTTAAATTATTGGAGGACAAAGTTAAG  697

seq1  TTGTTGGTGACATTAAAGCATTTAAGATCATTAAATAGCTTTGGATATAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGTGACATTAAAGCATTTAAGATCATTAAATAGCTTTGGATATAG  747

seq1  TTTTAAGTGATTAACATAAATTTTCCATTGATAAAGGCAACAATAAGCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTGATTAACATAAATTTTCCATTGATAAAGGCAACAATAAGCTT  797

seq1  AAGCCTAAATAACTAAGGTTATATAATTATGATTTTCTATTTGTTTCTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAAATAACTAAGGTTATATAATTATGATTTTCTATTTGTTTCTTA  847

seq1  CAATGGGAATACAAAATCTGTTTTTTTTAATAAGAGAAGACAAATATATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGAATACAAAATCTGTTTTTTTTAATAAGAGAAGACAAATATATA  897

seq1  TTTAAATGAAATAAAATAAACTTGTAAGGCTTCTTTACAGTCAGTGTAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGAAATAAAATAAACTTGTAAGGCTTCTTTACAGTCAGTGTAGT  947

seq1  TAAACCCAGTACTGCAACTAGAGTGTGAGGCTGTGGGATCCTCCTCATCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCAGTACTGCAACTAGAGTGTGAGGCTGTGGGATCCTCCTCATCC  997

seq1  ATGCCTGTGTTAAGGAAGTAATGTAATTTTCCTCTCCTAAGTAAGCCATC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGTGTTAAGGAAGTAATGTAATTTTCCTCTCCTAAGTAAGCCATC  1047

seq1  TGCATGAGATCACAGCTTCTGCGCCTCTGCTGAATTC  1085
      |||||||||||||||||||||||||||||||||||||
seq2  TGCATGAGATCACAGCTTCTGCGCCTCTGCTGAATTC  1084


seq1: chr3_75260281_75261289
seq2: B6Ng01-186L13.g_65_1079

seq1  GAATTCAGATAAAACATATATGCAGTTGAGAAACATGTAATTATTCTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATAAAACATATATGCAGTTGAGAAACATGTAATTATTCTACC  50

seq1  TAGCATAACATTTTAAAATTATTTGTCATGTTGATTTCCTAAGAAAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAACATTTTAAAATTATTTGTCATGTTGATTTCCTAAGAAAACAT  100

seq1  TCAGGTACTGACTAGTTTAGTTTTGTTTTGGTTTGGTTTGGTTTTTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTACTGACTAGTTTAGTTTTGTTTTGGTTTGGTTTGGTTTTTTTCT  150

seq1  GAGAATACCTAGAAAACATGGTTCTTGATTATCTCACTTCATAAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATACCTAGAAAACATGGTTCTTGATTATCTCACTTCATAAATTTTA  200

seq1  GACTTTAGAAAATCTGTCTTCAGAATATCCTTCAAATATAGAACATTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTAGAAAATCTGTCTTCAGAATATCCTTCAAATATAGAACATTATA  250

seq1  AGATCATTTCATTTTTATATTTATGAAAACAGAGCTCTGAGCCTCAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATTTCATTTTTATATTTATGAAAACAGAGCTCTGAGCCTCAGTGT  300

seq1  TAAACTCTTAAAAATATTCCCTTTTAAAGGAACCTGAAATCTCATTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCTTAAAAATATTCCCTTTTAAAGGAACCTGAAATCTCATTTTTG  350

seq1  AAACTAAGAAAAGATTGTGTATTTTTAACTGGTAATGGCTAAAACTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGAAAAGATTGTGTATTTTTAACTGGTAATGGCTAAAACTTAAA  400

seq1  CTCTCTTTAATGATCACTTTTCTGGTCATTTTTCAAGGAAAGAATCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTAATGATCACTTTTCTGGTCATTTTTCAAGGAAAGAATCAAAA  450

seq1  TTAAAATGTATTATCTACCAAATGTCACCATGCCATATACAAATAGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTATTATCTACCAAATGTCACCATGCCATATACAAATAGAGGT  500

seq1  ATCTAAATAGTTTTCTTTCCTTTTGATTTGTCCACTTACCTCATACCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAATAGTTTTCTTTCCTTTTGATTTGTCCACTTACCTCATACCTGG  550

seq1  AAGGTATACCTCTAAAATGTACACTTACCTCTACCACCACAATACCCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATACCTCTAAAATGTACACTTACCTCTACCACCACAATACCCTAT  600

seq1  GGAGACATAGATAATTTAAGGGGTCTTTATTAATAAACATTTCTACTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACATAGATAATTTAAGGGGTCTTTATTAATAAACATTTCTACTATT  650

seq1  TTCAATGTGCTGGTTTTATATAAACAAGCCTACAAATACATCTAAGCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTGCTGGTTTTATATAAACAAGCCTACAAATACATCTAAGCTCA  700

seq1  ATTAAGTAATTAATTTTTAAGAAAAAATTTCCTAGAAGCATAATTTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTAATTAATTTTTAAGAAAAAATTTCCTAGAAGCATAATTTCTGA  750

seq1  GACAAATAATTTATATGTTCTTTTAATAGACATTTATAATTTTATTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATAATTTATATGTTCTTTTAATAGACATTTATAATTTTATTATTT  800

seq1  GAGGATTTCATACCTCCATCTATTGACGTTCAATAACATTCACAACCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTTCATACCTCCATCTATTGACGTTCAATAACATTCACAACCCCT  850

seq1  CCCCTCCCCTCCCCCACATCTTTTCCCTTCCTGTGCTTTGTTTCTTAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCCTCCCCCACATCTTTTCCCTTCCTGTGCTTTGTTTCTTAAAC  900

seq1  TCACTGAGTTTGCTCTTTACTGTCTGTGTGGGCATGAATGTAGGACAGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAGTTTGCTCTTTACTGTCTGTGTGGGCATGAATGTAGGACAGTT  950

seq1  TGCTGGAATATGTTCCTTTCTGAGAACAC-AGGATTTGTTGT---TGTTG  996
      |||||||||||||||  |||||||||||| ||||||||||||   |||||
seq2  TGCTGGAATATGTTC--TTCTGAGAACACAAGGATTTGTTGTTTGTGTTG  998

seq1  TTGTTGTTTGTTT----  1009
      | |||| ||| ||    
seq2  TGGTTGATTGATTGTTT  1015


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