BAC Information

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BAC

Clone NameB6Ng01-188I09
Chromosome3 (Build37)
Map Location 15,116,913 - 15,117,980
singlet/doubletsinglet
Overlap genenone
Upstream gene0710005M24Rik, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323
Downstream geneLOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188I09.bB6Ng01-188I09.g
ACCGA012802GA012803
length1,0701,142
definitionB6Ng01-188I09.b B6Ng01-188I09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaggctatattctctaatttccgtcgtttacagagcctcaag
aagaccaagcctcttaaatatacagttttcacagaaaagatgcttttaac
ttatctattgaggattaaaatatggaggaaggaaagtgccaggctagatt
ataaagcagtaacataaaatacagtagttgggccaacttagagcactgac
ggggcagagtgctttggacttacagtagaaaggcagcagcaggcaagtag
gaacaagtgtggagaaaaaaagtatgtataattttacagccacaaaaatc
tcacagacattaaaaatgtgcttgctaaaataaaaatttctaaagatatg
ttgaaaatacaaagaaatctagaaaatgaagcaaaacacaattaacttaa
atagttggacaagaaattatatgtaagagaaaagagagaaggagtgtatc
tgagagactatatggaaataagaaaagtctgctacctctcctcctgttac
agagagagagagagagagagagagagagagagagagagagagagagagag
agaagaagaggaggaggaggagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
gaagaagaagaagaaaggcctttagtaactgtcatttcagtgaatgacag
aacctaaccaaaaaaaaaaaaaagtttcttgttttgaaattcagtgaaga
aataacaaaagaagggaagagaagaagagaagagaagagaagagaagaga
agagaagagaagagagagaagagaagagaagagaagagactaaccagaca
cgacgaaagagagatgaaaaggagaagaatgagaaaagagatgtctaaaa
tgctgctgaggggaaatatttggaaatggcatttaactacaaaacctggg
ggattcaacaccaaacaccttggtatcaatatactatctatcctgactgc
ctatagacacagtaaatggtggggggggcactttaatttttgaaaggata
ccttttcatcatgaatagag
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggattttttg
catcgatgttcataagagaaattggtctgaagttctctatctttgtttat
ataatggattacattgatggattttcgtatattaaaccatccctgcatcc
ctggaataaaacctacttggtcaggatggatgattgctttaatgtgttct
tggattcggttagcgagaattttattaaggattttttgcatcgatgttca
taagagaaattggtctgaagttctctatctttgttggatctttctgtggt
ttaggtatcagagtaatagtggcttcataaaatgagttgggtagaatacc
ttctacttctatcttgtgaaaaagtttgtgcagaactggagttagatctt
ctttgaaggtctgatagaactctgcactaaacccgtctggtcctgggctt
tttttggctgggagactattaataactgcttctatttctttaggggatat
gggactgtttagaaggtcaacttgatcctgattcaactttggtacctggt
atctgtcccagaaatttgtccatttcgtccaggttttccagtttttgttg
agtatagccttttgtagaaggatctgatggtgttttgggatttcttcagg
atctgttgttaatgtctcccttttcatttctgattttgttaattaaggat
tttgtccctgtgccctttagtgagtctagctaagggtttatctatcttgt
ttgattttctcaaagaaccacctcctcgtttgggttaattcctttgaaat
agttccttctgtttcaactggatgatttcacccctgaagtttgaatattc
ctgccgctaactcctcttgggtgaaattgcctactttattccaaggcctt
ttaagtgtacttgtcagacctgccatgattaggtgcgcactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15116913_15117980
seq2: B6Ng01-188I09.b_47_1116 (reverse)

seq1  CTCTATTCATGATGAAAA-GTATCCCTTCAAAAATTTAAAGTG-CCCCCC  48
      |||||||||||||||||| |||||| |||||||| |||||||| ||||||
seq2  CTCTATTCATGATGAAAAGGTATCCTTTCAAAAA-TTAAAGTGCCCCCCC  49

seq1  CAACATTTACTGTGTCTATAGGACAGTCA-GATAGATAGTATATTGATAA  97
      || ||||||||||||||||||| |||||| ||||||||||||||||||| 
seq2  CACCATTTACTGTGTCTATAGG-CAGTCAGGATAGATAGTATATTGATAC  98

seq1  CAAGTGTTTTGGTGTTTGAAT-CCCCAGGTTTTGTAGTT-AATG-CATTT  144
      ||||   ||||||| |||||| ||||||||||||||||| |||| |||||
seq2  CAAGGTGTTTGGTG-TTGAATCCCCCAGGTTTTGTAGTTAAATGCCATTT  147

seq1  -CAAATATTTCCCCTCAGCAGCATTTTAGACATCTTCTTTTCTCATTTCT  193
       ||||||||||||||||||||||||||||||||| |||||||||| ||||
seq2  CCAAATATTTCCCCTCAGCAGCATTTTAGACATC-TCTTTTCTCA-TTCT  195

seq1  TCTCTTTTCTTCTTCTCT-TTTCTTCTTCTCT-TCTCTTCTCTTCTCTTC  241
      |||| ||  ||| ||||| |||| || | |||   |  ||||||||||||
seq2  TCTCCTT--TTCATCTCTCTTTCGTCGTGTCTGGTTAGTCTCTTCTCTTC  243

seq1  TCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTC  291
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTCTC-TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTC  292

seq1  TCTTCTTCTCTTCCCTTCTTTTGTTATTTCTTCACTGAATTTCAAAACAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTCTTCCCTTCTTTTGTTATTTCTTCACTGAATTTCAAAACAA  342

seq1  GAAAC-TTTTTTTTTTTTTGGTTAGGTTCTGTCATTCACTGAAATGACAG  390
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTTTTTTTTTTTTGGTTAGGTTCTGTCATTCACTGAAATGACAG  392

seq1  TTACTAAAGGCCTTTCTTCTTCTTCTTCCTTCTTCTTCTTCTTCTTCTTC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAAGGCCTTTCTTCTTCTTCTTCCTTCTTCTTCTTCTTCTTCTTC  442

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  492

seq1  CTTCTTCTCCTCCTCCTCCTCTTCTTCTCTCTCTCTCTCTCTCTCTCTCT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTCCTCCTCCTCCTCTTCTTCTCTCTCTCTCTCTCTCTCTCTCT  542

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAACAGGAGGAGAGGTAGCAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAACAGGAGGAGAGGTAGCAG  592

seq1  ACTTTTCTTATTTCCATATAGTCTCTCAGATACACTCCTTCTCTCTTTTC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCTTATTTCCATATAGTCTCTCAGATACACTCCTTCTCTCTTTTC  642

seq1  TCTTACATATAATTTCTTGTCCAACTATTTAAGTTAATTGTGTTTTGCTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACATATAATTTCTTGTCCAACTATTTAAGTTAATTGTGTTTTGCTT  692

seq1  CATTTTCTAGATTTCTTTGTATTTTCAACATATCTTTAGAAATTTTTATT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTAGATTTCTTTGTATTTTCAACATATCTTTAGAAATTTTTATT  742

seq1  TTAGCAAGCACATTTTTAATGTCTGTGAGATTTTTGTGGCTGTAAAATTA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAAGCACATTTTTAATGTCTGTGAGATTTTTGTGGCTGTAAAATTA  792

seq1  TACATACTTTTTTTCTCCACACTTGTTCCTACTTGCCTGCTGCTGCCTTT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACTTTTTTTCTCCACACTTGTTCCTACTTGCCTGCTGCTGCCTTT  842

seq1  CTACTGTAAGTCCAAAGCACTCTGCCCCGTCAGTGCTCTAAGTTGGCCCA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTAAGTCCAAAGCACTCTGCCCCGTCAGTGCTCTAAGTTGGCCCA  892

seq1  ACTACTGTATTTTATGTTACTGCTTTATAATCTAGCCTGGCACTTTCCTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGTATTTTATGTTACTGCTTTATAATCTAGCCTGGCACTTTCCTT  942

seq1  CCTCCATATTTTAATCCTCAATAGATAAGTTAAAAGCATCTTTTCTGTGA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATATTTTAATCCTCAATAGATAAGTTAAAAGCATCTTTTCTGTGA  992

seq1  AAACTGTATATTTAAGAGGCTTGGTCTTCTTGAGGCTCTGTAAACGACGG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTATATTTAAGAGGCTTGGTCTTCTTGAGGCTCTGTAAACGACGG  1042

seq1  AAATTAGAGAATATAGCCTTCTGAATTC  1068
      ||||||||||||||||||||||||||||
seq2  AAATTAGAGAATATAGCCTTCTGAATTC  1070