BAC Information

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BAC

Clone NameB6Ng01-189B23
Chromosome3 (Build37)
Map Location 49,563,122 - 49,734,087
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779, Pcdh18
Downstream geneLOC100039628, LOC639469, Slc7a11, EG621304, LOC100039667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189B23.bB6Ng01-189B23.g
ACCGA013232GA013233
length182974
definitionB6Ng01-189B23.b B6Ng01-189B23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,733,906 - 49,734,087)(49,563,122 - 49,564,094)
sequence
agtattcagggacacaaatgttttcttggataatccctgtgctatataaa
tctgaagcagggaaatagtaatattatcactgagagattctgggaacttt
gaaatgtttttttaaaaatctgtaatttagaatggggcacacatttgtgg
aggaagaagaagagaatggaagggaaggggag

gaattccaaagacatctaagtctatcagtttgaggactttcatctgtgaa
tgtgataagcatactgccacaacgcatgccttggcttggtcatcttcatt
tatgggatgcgtcttacatttgcttagagcaccatgctttagcaaatctt
tctcttcctccaggcagtgtgcttgcccataaatattatgaaaatgactt
catcttccaaggtattcaccataaattgacaggtgagatgtggccattca
gaatgtgtttctgtgcttatgactctagcaatcttggaatcatctcgcgg
atgcttgcaatctctttacacttagagcagaggctaatgtcttcctgagt
ggtttacatagctacttggtctgggatagaatctatggggacatgatacc
tcacccctttaatctaagcacttgggaggcaagtggaactctatgagttc
aaagccagcttcgtctgcattgcaaatcaccattcagtaagagctataaa
aggaaacaataatatatctcttttatatgtttcattaattctaacaatta
tttcttacaactacaaagaaagtacaaaaacacaaacaaacaagcaaaca
aacaaattcctatctctcagaccacacctgagagagatgagggttttttt
ttttattattattttttaacctggtctcttgaccttggcctgatacaact
tatttctttagactttcacaaatgtgggaacaagtacatggccttctcca
agaacttcttaggcagccagtagaagaaagcaaatagcatattcctaaaa
gtccatcaccttgatgtggcagctttttttgattaggaagaggagtgttt
tcattgctttgactactgtgcccatgtaagtgaggtcagatatgtgaaca
aagtggtcctgtgcctctggattgaagttgacttggtctagtctgttggc
atactttttttcatgattcccctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_49733906_49734087
seq2: B6Ng01-189B23.b_48_229 (reverse)

seq1  CTCCCCTTCCCTTCCATTCTCTTCTTCTTCCTCCACAAATGTGTGCCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTCCCTTCCATTCTCTTCTTCTTCCTCCACAAATGTGTGCCCCA  50

seq1  TTCTAAATTACAGATTTTTAAAAAAACATTTCAAAGTTCCCAGAATCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATTACAGATTTTTAAAAAAACATTTCAAAGTTCCCAGAATCTCT  100

seq1  CAGTGATAATATTACTATTTCCCTGCTTCAGATTTATATAGCACAGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATAATATTACTATTTCCCTGCTTCAGATTTATATAGCACAGGGAT  150

seq1  TATCCAAGAAAACATTTGTGTCCCTGAATACT  182
      ||||||||||||||||||||||||||||||||
seq2  TATCCAAGAAAACATTTGTGTCCCTGAATACT  182


seq1: chr3_49563122_49564094
seq2: B6Ng01-189B23.g_68_1040

seq1  GAATTCCAAAGACATCTAAGTCTATCAGTTTGAGGACTTTCATCTGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGACATCTAAGTCTATCAGTTTGAGGACTTTCATCTGTGAA  50

seq1  TGTGATAAGCATACTGCCACAACGCATGCCTTGGCTTGGTCATCTTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATAAGCATACTGCCACAACGCATGCCTTGGCTTGGTCATCTTCATT  100

seq1  TATGGGATGCGTCTTACATTTGCTTAGAGCACCATGCTTTAGCAAATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGATGCGTCTTACATTTGCTTAGAGCACCATGCTTTAGCAAATCTT  150

seq1  TCTCTTCCTCCAGGCAGTGTGCTTGCCCATAAATATTATGAAAATGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCTCCAGGCAGTGTGCTTGCCCATAAATATTATGAAAATGACTT  200

seq1  CATCTTCCAAGGTATTCACCATAAATTGACAGGTGAGATGTGGCCATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCAAGGTATTCACCATAAATTGACAGGTGAGATGTGGCCATTCA  250

seq1  GAATGTGTTTCTGTGCTTATGACTCTAGCAATCTTGGAATCATCTCGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTTTCTGTGCTTATGACTCTAGCAATCTTGGAATCATCTCGCGG  300

seq1  ATGCTTGCAATCTCTTTACACTTAGAGCAGAGGCTAATGTCTTCCTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCAATCTCTTTACACTTAGAGCAGAGGCTAATGTCTTCCTGAGT  350

seq1  GGTTTACATAGCTACTTGGTCTGGGATAGAATCTATGGGGACATGATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACATAGCTACTTGGTCTGGGATAGAATCTATGGGGACATGATACC  400

seq1  TCACCCCTTTAATCTAAGCACTTGGGAGGCAAGTGGAACTCTATGAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCTTTAATCTAAGCACTTGGGAGGCAAGTGGAACTCTATGAGTTC  450

seq1  AAAGCCAGCTTCGTCTGCATTGCAAATCACCATTCAGTAAGAGCTATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGCTTCGTCTGCATTGCAAATCACCATTCAGTAAGAGCTATAAA  500

seq1  AGGAAACAATAATATATCTCTTTTATATGTTTCATTAATTCTAACAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACAATAATATATCTCTTTTATATGTTTCATTAATTCTAACAATTA  550

seq1  TTTCTTACAACTACAAAGAAAGTACAAAAACACAAACAAACAAGCAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTACAACTACAAAGAAAGTACAAAAACACAAACAAACAAGCAAACA  600

seq1  AACAAATTCCTATCTCTCAGACCACACCTGAGAGAGATGAGGGTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTCCTATCTCTCAGACCACACCTGAGAGAGATGAGGGTTTTTTT  650

seq1  TTTTATTATTATTTTTTAACCTGGTCTCTTGACCTTGGCCTGATACAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTATTATTTTTTAACCTGGTCTCTTGACCTTGGCCTGATACAACT  700

seq1  TATTTCTTTAGACTTTCACAAATGTGGGAACAAGTACATGGCCTTCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTAGACTTTCACAAATGTGGGAACAAGTACATGGCCTTCTCCA  750

seq1  AGAACTTCTTAGGCAGCCAGTAGAAGAAAGCAAATAGCATATTCCTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCTTAGGCAGCCAGTAGAAGAAAGCAAATAGCATATTCCTAAAA  800

seq1  GTCCATCACCTTGATGTGGCAGC-TTTTTTGATTAGGAAGAGGAGTGTTT  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTCCATCACCTTGATGTGGCAGCTTTTTTTGATTAGGAAGAGGAGTGTTT  850

seq1  TCATTGC-TTGACTACTGTGCCCATGTAAGTGAGGTCAGATATGTGAACA  898
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCTTTGACTACTGTGCCCATGTAAGTGAGGTCAGATATGTGAACA  900

seq1  AAGTGGTCCTGTGCCTCTGGATTTGAAGTTGACTGGGTCTAGTCTGTTGG  948
      ||||||||||||||||||||| |||||||||||| ||||||||||||| |
seq2  AAGTGGTCCTGTGCCTCTGGA-TTGAAGTTGACTTGGTCTAGTCTGTT-G  948

seq1  GCATACTTTTTTCCATGATTCCCCT  973
      |||||||||||| ||||||||||||
seq2  GCATACTTTTTTTCATGATTCCCCT  973


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