BAC Information

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BAC

Clone NameB6Ng01-189G18
Chromosome3 (Build37)
Map Location 112,144,388 - 112,145,457
singlet/doubletsinglet
Overlap geneLOC668717
Upstream geneLOC625585, EG229746
Downstream geneUtp14B-ps, EG433643, OTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1, LOC100043684, LOC100043686
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189G18.g
ACCGA013448
length1,063
definitionB6Ng01-189G18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctgaaccctacatggataagtctatgttattttcaaaaactg
taattttggggggcaaatgtcctgtgtttatatttgttacacgttgctct
ttgctatctaatgggcttcacttcttgacacacatagcttactttaaagt
ctgtgtatgataaggtactgcagagaaaaagcatcaacatgaaatacaat
cgaggtggtgaaaatggtttgtaagtagaagctgacttacaaaattacaa
aaactgtcagttttatattctacaaaggcaaggctcagggagtatgttgg
acaaaaaaatagggaactaaaaaagcatgtatgccatgaaaagctgtcaa
tcagggagaatccttgtacttggaaaatattcaacttttagtatgtacag
ttgtatggataaaacaaatttattaaatctactacatactaactgtttta
aagtactgtctcaaaaacttatagaataaaatttaatgaaaatgcctaac
tactccatttccagtaaatttaaaatataaaattcactattattgaaaca
agaagacaaattaaaatacatctctccaattacattaattacacagtcag
cttacatgttaatttagaaagatgagctctcttgtggcctaggctcaccc
atttaccaaccttttaaattgttcttttatccccaaatttacatttaaaa
atgtaatcacaaacatgtcttggtacaagatgctacacaaaagtacactg
ggtaaattcttaacatttagaattttttctaaatatttgttttattttta
agatgtgtgtatgcatatgtgtctttacatggggattttgtttgtcagga
taagtgcttgcagaaagatcagatgttgagttgtttggatcaggagttac
aggctaacataagtcctgcatgctaaactcgagtcctcttggaaaacagt
gtgtacctttaaccactgagtcattcctcatctctgtttttaaaagtata
aacatgcagatttagatatttctgagtatgattcttttaacattagaaaa
aggtagtaagtct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_112144388_112145457
seq2: B6Ng01-189G18.g_66_1128 (reverse)

seq1  AGACCTACTACCTTTTTCTTAATGTTAAAGGAATTCAATACCTCAGAAAT  50
      |||| ||||||||||||| |||||||||| ||||   ||| |||||||||
seq2  AGACTTACTACCTTTTTC-TAATGTTAAAAGAAT--CATA-CTCAGAAAT  46

seq1  TATTCTTAAAATCTGCATGTTTATACTTTTAAAAACAGAGATGGAGAATG  100
         |||  |||||||||||||||||||||||||||||||||||  |||||
seq2  --ATCT--AAATCTGCATGTTTATACTTTTAAAAACAGAGATGAGGAATG  92

seq1  ACTCAGTGGTTAAGGGTACACACTGTTTTTCCAGAGGACTCGAGTTTAGC  150
      ||||||||||||| ||||||||||||||| | ||||||||||||||||||
seq2  ACTCAGTGGTTAAAGGTACACACTGTTTTCCAAGAGGACTCGAGTTTAGC  142

seq1  ATGCAGGACTTATGTTAGCCTGTAACTCCTGATCCAAACAACTCAACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGACTTATGTTAGCCTGTAACTCCTGATCCAAACAACTCAACATC  192

seq1  TGATCTTTCTGCAAGCACTTATCCTGACAAAC-AAATCCCCATGTAAAGA  249
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGATCTTTCTGCAAGCACTTATCCTGACAAACAAAATCCCCATGTAAAGA  242

seq1  CACATATGCATACACACATCTTAAAAATAAAACAAATATTTAGAAAAAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGCATACACACATCTTAAAAATAAAACAAATATTTAGAAAAAAT  292

seq1  TCTAAATGTTAAGAATTTACCCAGTGTACTTTTGTGTAGCATCTTGTACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATGTTAAGAATTTACCCAGTGTACTTTTGTGTAGCATCTTGTACC  342

seq1  AAGACATGTTTGTGATTACATTTTTAAATGTAAATTTGGGGATAAAAGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGTTTGTGATTACATTTTTAAATGTAAATTTGGGGATAAAAGAA  392

seq1  CAATTTAAAAGGTTGGTAAATGGGTGAGCCTAGGCCACAAGAGAGCTCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAAAAGGTTGGTAAATGGGTGAGCCTAGGCCACAAGAGAGCTCAT  442

seq1  CTTTCTAAATTAACATGTAAGCTGACTGTGTAATTAATGTAATTGGAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAAATTAACATGTAAGCTGACTGTGTAATTAATGTAATTGGAGAG  492

seq1  ATGTATTTTAATTTGTCTTCTTGTTTCAATAATAGTGAATTTTATATTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTTAATTTGTCTTCTTGTTTCAATAATAGTGAATTTTATATTTT  542

seq1  AAATTTACTGGAAATGGAGTAGTTAGGCATTTTCATTAAATTTTATTCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTACTGGAAATGGAGTAGTTAGGCATTTTCATTAAATTTTATTCTA  592

seq1  TAAGTTTTTGAGACAGTACTTTAAAACAGTTAGTATGTAGTAGATTTAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTTTGAGACAGTACTTTAAAACAGTTAGTATGTAGTAGATTTAAT  642

seq1  AAATTTGTTTTATCCATACAACTGTACATACTAAAAGTTGAATATTTTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTTTTATCCATACAACTGTACATACTAAAAGTTGAATATTTTCC  692

seq1  AAGTACAAGGATTCTCCCTGATTGACAGCTTTTCATGGCATACATGCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAAGGATTCTCCCTGATTGACAGCTTTTCATGGCATACATGCTTT  742

seq1  TTTAGTTCCCTATTTTTTTGTCCAACATACTCCCTGAGCCTTGCCTTTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTCCCTATTTTTTTGTCCAACATACTCCCTGAGCCTTGCCTTTGT  792

seq1  AGAATATAAAACTGACAGTTTTTGTAATTTTGTAAGTCAGCTTCTACTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAAAACTGACAGTTTTTGTAATTTTGTAAGTCAGCTTCTACTTA  842

seq1  CAAACCATTTTCACCACCTCGATTGTATTTCATGTTGATGCTTTTTCTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATTTTCACCACCTCGATTGTATTTCATGTTGATGCTTTTTCTCT  892

seq1  GCAGTACCTTATCATACACAGACTTTAAAGTAAGCTATGTGTGTCAAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTACCTTATCATACACAGACTTTAAAGTAAGCTATGTGTGTCAAGAA  942

seq1  GTGAAGCCCATTAGATAGCAAAGAGCAACGTGTAACAAATATAAACACAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGCCCATTAGATAGCAAAGAGCAACGTGTAACAAATATAAACACAG  992

seq1  GACATTTGCCCCCCAAAATTACAGTTTTTGAAAATAACATAGACTTATCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTGCCCCCCAAAATTACAGTTTTTGAAAATAACATAGACTTATCC  1042

seq1  ATGTATGGTTCAGAAGAATTC  1070
      ||||| |||||||||||||||
seq2  ATGTAGGGTTCAGAAGAATTC  1063