BAC Information

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BAC

Clone NameB6Ng01-189P24
Chromosome3 (Build37)
Map Location 20,731,284 - 20,830,246
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg, Cpa3, EG664965, LOC100040283, Cpb1, Agtr1b
Downstream geneEG665094, LOC100040325, 7530428D23Rik, LOC100039465
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189P24.bB6Ng01-189P24.g
ACCGA013873GA013874
length1831,095
definitionB6Ng01-189P24.b B6Ng01-189P24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,830,064 - 20,830,246)(20,731,284 - 20,732,375)
sequence
gaattcatgaaaatgtaatattgaaactcattattttgtctgttccagag
tctgagacaagaaaggcaatgaaaaatgcaggtctatcagggttacatag
tgacacctgctcataattgttttaaaggtggaaggaaggaaggaaggaag
gaaggaaggaaggaaggaaggaaggaaggaagg
gaattctctttacattggccttgaacttattggattaagtggctttcaga
ggcatgtcactagaggaaggatatcccattagaaacttttctctttgaat
tcttattttctgagacttgtactgtagaaagaacagtttatttttttttt
taatttttttattttgtttttttttaattaggtatttatttcatttacat
ttctaatgctatcccgaaaccaaaatgagaaattgtttgtgtgttcatgg
cagaatcagtctatgaggcttagattcaaatgcaaatagtttgctgacag
aagcagcaagcaggagtcctgggggggtgagtgacacctgtcaagaaata
ccttggtcaggccgagtagttcagactgcatccacaataggcaatcaaat
aaaattcttcccaggagacctagtaaacagcctgatatgtggacaagaat
tgtacatttcagggagttagaatagcctgggttatttgaacacaacgtta
tttgaattaatgttggggactgctgaaaacagggtgtgctaattccctag
tatttccacactcacacacacaggaaaaaaactcctagaagaatccccag
agaagtatcatctcagccacgttggtattgaattccttacccagggaggg
tttggagtccagaagaagccaagctgctggtgctgaaggcattgagggca
ttctattctctaaacccctgaagacttaaatttataatgattaatccata
ttttaggctaaaatttcctaaaacattaccaggtctagaatttcctttgt
gaatccttttgtgattacaacattccatattttttttccttaaaatattg
actacattttccattttgtcttagtttgaggcattgatttacaattagtg
tgctttttattttttagcatgttaaaaacaacataatattgtttattttt
cctgataatgattacttgagtcttacttttttttgtgttgagccatttta
agtagccttatgctgccagttaattactgttcatccaggagcctgacatg
tagtcttcttgagttcctggtgggtgtcacattttctgtacatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_20830064_20830246
seq2: B6Ng01-189P24.b_41_223 (reverse)

seq1  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC  50

seq1  TTCCACCTTTAAAACAATTATGAGCAGGTGTCACTATGTAACCCTGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTTTAAAACAATTATGAGCAGGTGTCACTATGTAACCCTGATAG  100

seq1  ACCTGCATTTTTCATTGCCTTTCTTGTCTCAGACTCTGGAACAGACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCATTTTTCATTGCCTTTCTTGTCTCAGACTCTGGAACAGACAAAA  150

seq1  TAATGAGTTTCAATATTACATTTTCATGAATTC  183
      |||||||||||||||||||||||||||||||||
seq2  TAATGAGTTTCAATATTACATTTTCATGAATTC  183

seq1: chr3_20731284_20732375
seq2: B6Ng01-189P24.g_60_1154

seq1  GAATTCTCTTTACATTGGCCTTGAACTTATTGGATTAAGTGGCTTTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTACATTGGCCTTGAACTTATTGGATTAAGTGGCTTTCAGA  50

seq1  GGCATGTCACTAGAGGAAGGATATCCCATTAGAAACTTTTCTCTTTGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTCACTAGAGGAAGGATATCCCATTAGAAACTTTTCTCTTTGAAT  100

seq1  TCTTATTTTCTGAGACTTGTACTGTAGAAAGAACAGTTTATTTTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTTCTGAGACTTGTACTGTAGAAAGAACAGTTTATTTTTTTTTT  150

seq1  TAATTTTTTTATTTTGTTTTTTTTTAATTAGGTATTTATTTCATTTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTTATTTTGTTTTTTTTTAATTAGGTATTTATTTCATTTACAT  200

seq1  TTCTAATGCTATCCCGAAACCAAAATGAGAAATTGTTTGTGTGTTCATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATGCTATCCCGAAACCAAAATGAGAAATTGTTTGTGTGTTCATGG  250

seq1  CAGAATCAGTCTATGAGGCTTAGATTCAAATGCAAATAGTTTGCTGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCAGTCTATGAGGCTTAGATTCAAATGCAAATAGTTTGCTGACAG  300

seq1  AAGCAGCAAGCAGGAGTCCTGGGGGGGTGAGTGACACCTGTCAAGAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCAAGCAGGAGTCCTGGGGGGGTGAGTGACACCTGTCAAGAAATA  350

seq1  CCTTGGTCAGGCCGAGTAGTTCAGACTGCATCCACAATAGGCAATCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTCAGGCCGAGTAGTTCAGACTGCATCCACAATAGGCAATCAAAT  400

seq1  AAAATTCTTCCCAGGAGACCTAGTAAACAGCCTGATATGTGGACAAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTTCCCAGGAGACCTAGTAAACAGCCTGATATGTGGACAAGAAT  450

seq1  TGTACATTTCAGGGAGTTAGAATAGCCTGGGTTATTTGAACACAACGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTTCAGGGAGTTAGAATAGCCTGGGTTATTTGAACACAACGTTA  500

seq1  TTTGAATTAATGTTGGGGACTGCTGAAAACAGGGTGTGCTAATTCCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTAATGTTGGGGACTGCTGAAAACAGGGTGTGCTAATTCCCTAG  550

seq1  TATTTCCACACTCACACACACAGGAAAAAAACTCCTAGAAGAATCCCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCACACTCACACACACAGGAAAAAAACTCCTAGAAGAATCCCCAG  600

seq1  AGAAGTATCATCTCAGCCACGTTGGTATTGAATTCCTTACCCAGGGAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTATCATCTCAGCCACGTTGGTATTGAATTCCTTACCCAGGGAGGG  650

seq1  TTTGGAGTCCAGAAGAAGCCAAGCTGCTGGTGCTGAAGGCATTGAGGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGTCCAGAAGAAGCCAAGCTGCTGGTGCTGAAGGCATTGAGGGCA  700

seq1  TTCTATTCTCTAAACCCCTGAAGACTTAAATTTATAATGATTAATCCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCTCTAAACCCCTGAAGACTTAAATTTATAATGATTAATCCATA  750

seq1  TTTTAGGCTAAAATTTCCTAAAACATTACCAGGTCTAGAATTTCCTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGCTAAAATTTCCTAAAACATTACCAGGTCTAGAATTTCCTTTGT  800

seq1  GAATCCTTTTGTGATTACAACATTCCATATTTTTTTTCCTTAAAATATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTTTTGTGATTACAACATTCCATATTTTTTTTCCTTAAAATATTG  850

seq1  ACTACATTTTCCATTTTGTCTTAGTTTGAGGCATTGATTTACAATTAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATTTTCCATTTTGTCTTAGTTTGAGGCATTGATTTACAATTAGTG  900

seq1  TGCTTTT--ATTTTTAGCATGTTTAAAAACAACAATAATATTGTTTA-TT  947
      |||||||   ||||||||||| ||||||||||| ||||||||||||| ||
seq2  TGCTTTTTATTTTTTAGCATG-TTAAAAACAAC-ATAATATTGTTTATTT  948

seq1  TTCCTGATAATGATTACTTGAGTCTTACTTTTTTTTGTGTTGAGCCATTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGATAATGATTACTTGAGTCTTACTTTTTTTTGTGTTGAGCCATTT  998

seq1  TAGGTAGCCTTATGGTGCCCAGTAAATTACTGTTCATCAAGGAG-CTGGC  1046
      || ||||||||||| || ||||| |||||||||||||| ||||| ||| |
seq2  TAAGTAGCCTTATGCTG-CCAGTTAATTACTGTTCATCCAGGAGCCTGAC  1047

seq1  ATGTAGTCTTCCTGAGTTTCTGGTGTGTGT-TCCTTTTCTGT-CATCA  1092
      ||||||||||| |||||| |||||| ||||  | |||||||| |||||
seq2  ATGTAGTCTTCTTGAGTTCCTGGTGGGTGTCACATTTTCTGTACATCA  1095