BAC Information

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BAC

Clone NameB6Ng01-190C09
Chromosome3 (Build37)
Map Location 76,463,139 - 76,464,371
singlet/doubletsinglet
Overlap geneFstl5
Upstream geneGolph4
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190C09.bB6Ng01-190C09.g
ACCGA013979GA013980
length1,2191,198
definitionB6Ng01-190C09.b B6Ng01-190C09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatctctcctgatgcccataagacctttagtgcagagatggcc
tttggaccctggtgacttcagttcagttatgttctctatggagatggtga
aaacagagaagagaaacacagccaaacagcgtcatcactgaactgcaatg
agcggacaaaccatattttataaaccttgattttagaaacatctcttctt
gactctaaatttactttatacactagaagaacagtattatataacattgt
gtaaatgttgaaggaaaatgaggttgaatatggtattttcaggttaatct
aatagggcttagaaaatcaggtatctggccaaatacaactttaatattat
tcctgagttcctggattctttcttcatttcttgtccagatttctaataat
gccaatattttaaaacattttttaaatgtttcttgattgcaggcagtgag
tacagatcctgtaccagttaaattacactacgacaagtcacatgaccaag
tctgggtgctgagctggggcagcatggagaagacatcaccaactctacag
gtagaacatgtcatgggagctgaagaagtgataatttaggtgtcttacag
atatttatgagcatttgactttcttcctatttggaactgtggtttcagtc
atcatctgtgcatagagaaggaaacatgtgtaaaatccaggttgttatgt
cagactaggatagtcacagatattatttattaaagattccaattatatga
taaaatattaagtgaccataagttaatgccattagaaaaaaatcattata
gtttgcctaatttcttatgctattactgaaacagaattcctgacactggg
tgatttatagagcataaagtactattttggctgacagttatagaatgaac
ctctgaactactaagaacagagaaagtttagtgaaataactgagccatat
cctaagtaaacatccatccattaataaataggtaaggacagatttgaatt
taggttctgcctgggtattcacagtgaagccatgaggtagaagactatgg
aacttgactaccatcctaaaggctgatctttcttaccatctagaggacag
gccctgttaactaaggaagaattctgtgttactctgggacattgccttat
taagtatagaatgatgactcacagaaacaaggcagaagtatatttggctg
aaccggtcatagaccctca

gaattcaaggcccatacataaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggatagaagctggaagaaatcccactaaa
atcagggactagacaaggctgcccactccctaacttttcaacatagtact
tgaagtattagccagagcaattcaacaacaaaaggagatcaaggggatac
aattggaaaagaggaagtcaaaatatcactttttgcagatgatatgatag
tatatataagtgaccctaaaaattccaccagagaaatcctaaacctgata
aaaagcttcggtgaagtagctggatataaaataaactcaaacaagtcaat
ggcctttctctacacaaagaataaacaggctgagaaagaaattacggaaa
caacacccttctcaattgtcacaaataatataaaatatctctgcgtgact
ctaactatggaagtgaaagatctgtatgataaaaacttcaagtctctgaa
gaaagaaattaaagaagatctcagaagatggaaagatctcccgtgctcat
ggattggcaggatcaacattgtaaaaatggctatcttgccaaaagcaatc
tacagattcaatgcaatccccatcaaaattccaactcatttcttccacga
attagaaggagcaatttgcaaattcatctggaataacaaaaaacctagga
tagcaaaaactcttctcaaggataaaagaaccactggtggaatcaccatg
actgacctaaagatttactacagagcaattgtgataaaaactgcatggta
ctggtgtagagacagacaagtagaccaatggaatagaattgaagacccag
aaatgaacccacacacatagggtcacttgatctttgataagggagctaaa
accattcagtggaagaaagacagcattttcaacaattgggtgctggcaca
actgggttgttatcgtgtagaagaatgcgaatcgatccatactatctctg
tactaaggtcaaatctaagtggatcaggacttcaacataaacagagacac
tgaaactatagaggagaaagtggggaaaagctgaagatttggcacaggga
aaattcttgacagacagccattgcttgtgctgtagatcgaattgacatgg
aactatgaactcaaggtttcggcaaggcaaaaggaccaccgcgtctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76463139_76464371
seq2: B6Ng01-190C09.b_45_1263

seq1  GAATTCAAATCTCTCCTGATGCCCATAAGACCTTTAGTGCAGAGATGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCTCTCCTGATGCCCATAAGACCTTTAGTGCAGAGATGGCC  50

seq1  TTTGGACCCTGGTGACTTCAGTTCAGTTATGTTCTCTATGGAGATGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACCCTGGTGACTTCAGTTCAGTTATGTTCTCTATGGAGATGGTGA  100

seq1  AAACAGAGAAGAGAAACACAGCCAAACAGCGTCATCACTGAACTGCAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGAAGAGAAACACAGCCAAACAGCGTCATCACTGAACTGCAATG  150

seq1  AGCGGACAAACCATATTTTATAAACCTTGATTTTAGAAACATCTCTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGACAAACCATATTTTATAAACCTTGATTTTAGAAACATCTCTTCTT  200

seq1  GACTCTAAATTTACTTTATACACTAGAAGAACAGTATTATATAACATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTAAATTTACTTTATACACTAGAAGAACAGTATTATATAACATTGT  250

seq1  GTAAATGTTGAAGGAAAATGAGGTTGAATATGGTATTTTCAGGTTAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGTTGAAGGAAAATGAGGTTGAATATGGTATTTTCAGGTTAATCT  300

seq1  AATAGGGCTTAGAAAATCAGGTATCTGGCCAAATACAACTTTAATATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGCTTAGAAAATCAGGTATCTGGCCAAATACAACTTTAATATTAT  350

seq1  TCCTGAGTTCCTGGATTCTTTCTTCATTTCTTGTCCAGATTTCTAATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGTTCCTGGATTCTTTCTTCATTTCTTGTCCAGATTTCTAATAAT  400

seq1  GCCAATATTTTAAAACATTTTTTAAATGTTTCTTGATTGCAGGCAGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATATTTTAAAACATTTTTTAAATGTTTCTTGATTGCAGGCAGTGAG  450

seq1  TACAGATCCTGTACCAGTTAAATTACACTACGACAAGTCACATGACCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATCCTGTACCAGTTAAATTACACTACGACAAGTCACATGACCAAG  500

seq1  TCTGGGTGCTGAGCTGGGGCAGCATGGAGAAGACATCACCAACTCTACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTGCTGAGCTGGGGCAGCATGGAGAAGACATCACCAACTCTACAG  550

seq1  GTAGAACATGTCATGGGAGCTGAAGAAGTGATAATTTAGGTGTCTTACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACATGTCATGGGAGCTGAAGAAGTGATAATTTAGGTGTCTTACAG  600

seq1  ATATTTATGAGCATTTGACTTTCTTCCTATTTGGAACTGTGGTTTCAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATGAGCATTTGACTTTCTTCCTATTTGGAACTGTGGTTTCAGTC  650

seq1  ATCATCTGTGCATAGAGAAGGAAACATGTGTAAAATCCAGGTTGTTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTGTGCATAGAGAAGGAAACATGTGTAAAATCCAGGTTGTTATGT  700

seq1  CAGACTAGGATAGTCACAGATATTATTTATTAAAGATTCCAATTATATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAGGATAGTCACAGATATTATTTATTAAAGATTCCAATTATATGA  750

seq1  TAAAATATTAAGTGACCATAAGTTAATGCCATTAGAAAAAAATCATTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTAAGTGACCATAAGTTAATGCCATTAGAAAAAAATCATTATA  800

seq1  GTTTGCCTAATTTCTTATGCTATTACTGAAACAGAATTCCTGACACTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCTAATTTCTTATGCTATTACTGAAACAGAATTCCTGACACTGGG  850

seq1  TGATTTATAGAGCATAAAGTACTATTTTGGCTGACAGTTATAGAATGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATAGAGCATAAAGTACTATTTTGGCTGACAGTTATAGAATGAAC  900

seq1  CTCTGAACTACTAAGAACAGAGAAAGTTTAGTGAAATAACTGAGCCATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAACTACTAAGAACAGAGAAAGTTTAGTGAAATAACTGAGCCATAT  950

seq1  CCTAAGTAAACATCCATCCATTAATAAATAGGTAAGGACAGATTTGAATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTAAACATCCATCCATTAATAAATAGGTAAGGACAGATTTGAATT  1000

seq1  TAGGTTCTGCCTGGGTATTCACAGTGAAGCCATGAGGTAG-AGACTATGG  1049
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAGGTTCTGCCTGGGTATTCACAGTGAAGCCATGAGGTAGAAGACTATGG  1050

seq1  AACTTGACTACCATCCTAAAGGCTGATCTT--CTACCATCTAGAGGACAG  1097
      ||||||||||||||||||||||||||||||   |||||||||||||||||
seq2  AACTTGACTACCATCCTAAAGGCTGATCTTTCTTACCATCTAGAGGACAG  1100

seq1  GCCCCTGTTTAACTAAGGAAG-ATTCTGTGTTACTCTTGGGACAATTGTC  1146
      | ||||| ||||||||||||| |||||||||||||| |||||| |||| |
seq2  G-CCCTG-TTAACTAAGGAAGAATTCTGTGTTACTC-TGGGAC-ATTGCC  1146

seq1  TTTATTTTATGTTATTTAG-ATGATGACTTCACAGAAACAAGGAAAGAAA  1195
      |   | ||| |   | ||| |||||||| |||||||||||||| |   ||
seq2  T---TATTAAG---TATAGAATGATGAC-TCACAGAAACAAGGCA--GAA  1187

seq1  GTAATAATTTTGGCTGAAACCCCGTGTCATAG-CCCTCA  1233
      || |||  ||||||||||   ||| ||||||| ||||||
seq2  GT-ATA--TTTGGCTGAA---CCG-GTCATAGACCCTCA  1219


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