BAC Information

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BAC

Clone NameB6Ng01-190J19
Chromosome3 (Build37)
Map Location 14,532,359 - 14,533,473
singlet/doubletsinglet
Overlap genenone
Upstream gene0710005M24Rik, LOC100041679, LOC100041667, LOC100039882, EG622229, LOC668062, Slc7a12, LOC668068
Downstream geneLrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190J19.bB6Ng01-190J19.g
ACCGA014324GA014325
length1,0491,110
definitionB6Ng01-190J19.b B6Ng01-190J19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcattgtgtcccaaaagtttgggtatgttgaggcttcattct
cattaaactctaaaaagtctttaatttcactctttatttcttcctttacc
aaggtatcattgaggagattgttgttcagtttccacgtgaatattgttgg
ctttgtattatttatgttgttattgaagaacagctttagtccaaggttat
ctgataggatgcatggacaatttcaatatttttctatctgtggaggtctg
ttttgtgaccacttatatggtcagttttggagaaggtaccatgaggtgct
gagaagttgtataccctttttttttttttttttttttaggatgaaatgtt
ctgtagatatctgttaaatccatttgtttcataacttctgttagtttcac
tgtgtctctgtttagtttctgtttccaggatctgtccattagtgagagtg
gggtattgaagtctcccactattattgtgtgaggtgcaatgtgtgctttg
agctttactaaagtttctttaatgaatgtggcttcgcttgcatttggagc
atagatattcaaacttgagagttcctcttggaagattttacgtttgatga
gtataaagtgcccctccttgtcttttttgataactctgggttggaagtta
attttattagatattagaatgtctactccagcttgttttttcagacagtt
tgcttgtaaaattgttttcctgcctttcactctgaggtagtgtctgtctt
tttccctgagatgggtttcctgtaagcagcaaaatgttgggtcctgtttg
tgtagtcagtctgttagtctatgtctttttattggggaattgagtccatt
gatattaagagatattttaaacaagtaattgtttcttcctgttatttttg
ttattagagttggcattctgttgtggctgtctcttttaggtttgttgaag
tattacttcttgctttctagggcagagttctgtcctatatggattttttt
tttccgtattacccttggaaggctggatcgtgaaagaaatgtgggacta
ctcaagagacactcttcaatgcctctgcaaaagcaaacactccaaagata
cttcactgggctgtttcaaggtagagttggtgagacaatggtttttccat
tgtggtataaaatttttctttggtaggtgatgacagtcatgacataagtt
gaccccctttccctcccaactgatagactgatctcctttcagggacctta
tttccacagttcttcagaaaatctcacaaaatggtaggggatgttcagac
tatgttgaaaaagatattctaacgatgccaaagagtttgtacacctttgt
tagtgcacacgtgtgggaaaatatcctgatgttttagttttttatacagt
ggggacaacctatctacagcctcaaggatgtgtagccgccacacaaaggc
attgcaaagataaggagacagccaccaaaatacagttttcctggctacca
cataaataacttgttggggacagcataccatgacagcgactgcccgcagt
aggccaggatggagacatctcagtagcccactgcagctctttgtagaaaa
cagtcgttcccacttctaatcttatccctgaataacagctgtatagaatt
catttgtgggtgcctgtctttcagttggtcttggtgggcataattattct
attatatctgactttcttatttctttctcccttctgctctggtgaattct
gtgaaactagacgttccttgattcttaaacagttaaaaattgaggcatag
ggacacagcacagcacagtcctaatggtgcctgctgtgtgttctcatctt
gaaaacaatataataactgaacaatgatagttccagattaatgcttgact
tgcaaagaaagtttgaagaaattattagaaaatgaattagagccaacatt
ggtatcccaagaaagggaatagttttttttgaattatgaaataaattttg
cacaacatttaagagtggtttctgaatagaagtaaagaatacataaaatt
atatatattcgtaacctaagtcaaacaactggaactctagaaagcattgt
gtgcattgtgccaaagcagaagctagcagaactattgagttatgttaacc
tgatcctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14532359_14533473
seq2: B6Ng01-190J19.g_74_1183 (reverse)

seq1  GAAAGAATCAAGTTAACCCTTAACTCAATAGTTCTGCTAGCTTTCTGCTT  50
      ||||| |||| |||||  | ||||||||||||||||||||| ||||||||
seq2  GAAAGGATCAGGTTAA--CATAACTCAATAGTTCTGCTAGC-TTCTGCTT  47

seq1  TTGCACATTGCACACAATGGCTTTCCTAAGAGTCCCAGTGTTTTGACTTA  100
      | ||||| |||||||||| ||||||   ||||| |||||  |||||||||
seq2  TGGCACAATGCACACAAT-GCTTTC--TAGAGTTCCAGTTGTTTGACTTA  94

seq1  GGTTTACGA--ATATATAATTTTATGTA-TCTTTACTTTCTTATTCAGAA  147
      || ||||||  ||||||||||||||||| |||||||||   |||||||||
seq2  GG-TTACGAATATATATAATTTTATGTATTCTTTACTT--CTATTCAGAA  141

seq1  ACCACTCTTAAATGTTGTGCAAAATTTATTTCATAATTTCAAAAAAACTA  197
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  ACCACTCTTAAATGTTGTGCAAAATTTATTTCATAATTCAAAAAAAACTA  191

seq1  TT-CCTTTCTTGGGATACCAATGTTGGCTCTAATTCATTTTCTAATAATT  246
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTCTTGGGATACCAATGTTGGCTCTAATTCATTTTCTAATAATT  241

seq1  TCTTCAAACTTTCTTTGCAAGTCAAGCATTAATCTGGAACTATCATTGTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAACTTTCTTTGCAAGTCAAGCATTAATCTGGAACTATCATTGTT  291

seq1  CAGTTATTATATTGTTTTCAAGATGAGAACACACAGCAGGCACCATTAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTATATTGTTTTCAAGATGAGAACACACAGCAGGCACCATTAGG  341

seq1  ACTGTGCTGTGCTGTGTCCCTATGCCTCAATTTTTAACTGTTTAAGAATC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCTGTGCTGTGTCCCTATGCCTCAATTTTTAACTGTTTAAGAATC  391

seq1  AAGGAACGTCTAGTTTCACAGAATTCACCAGAGCAGAAGGGAGAAAGAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACGTCTAGTTTCACAGAATTCACCAGAGCAGAAGGGAGAAAGAAA  441

seq1  TAAGAAAGTCAGATATAATAGAATAATTATGCCCACCAAGACCAACTGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGTCAGATATAATAGAATAATTATGCCCACCAAGACCAACTGAA  491

seq1  AGACAGGCACCCACAAATGAATTCTATACAGCTGTTATTCAGGGATAAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGCACCCACAAATGAATTCTATACAGCTGTTATTCAGGGATAAGA  541

seq1  TTAGAAGTGGGAACGACTGTTTTCTACAAAGAGCTGCAGTGGGCTACTGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTGGGAACGACTGTTTTCTACAAAGAGCTGCAGTGGGCTACTGA  591

seq1  GATGTCTCCATCCTGGCCTACTGCGGGCAGTCGCTGTCATGGTATGCTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTCCATCCTGGCCTACTGCGGGCAGTCGCTGTCATGGTATGCTGT  641

seq1  CCCCAACAAGTTATTTATGTGGTAGCCAGGAAAACTGTATTTTGGTGGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACAAGTTATTTATGTGGTAGCCAGGAAAACTGTATTTTGGTGGCT  691

seq1  GTCTCCTTATCTTTGCAATGCCTTTGTGTGGCGGCTACACATCCTTGAGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTTATCTTTGCAATGCCTTTGTGTGGCGGCTACACATCCTTGAGG  741

seq1  CTGTAGATAGGTTGTCCCCACTGTATAAAAAACTAAAACATCAGGATATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGATAGGTTGTCCCCACTGTATAAAAAACTAAAACATCAGGATATT  791

seq1  TTCCCACACGTGTGCACTAACAAAGGTGTACAAACTCTTTGGCATCGTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACACGTGTGCACTAACAAAGGTGTACAAACTCTTTGGCATCGTTA  841

seq1  GAATATCTTTTTCAACATAGTCTGAACATCCCCTACCATTTTGTGAGATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCTTTTTCAACATAGTCTGAACATCCCCTACCATTTTGTGAGATT  891

seq1  TTCTGAAGAACTGTGGAAATAAGGTCCCTGAAAGGAGATCAGTCTATCAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGAACTGTGGAAATAAGGTCCCTGAAAGGAGATCAGTCTATCAG  941

seq1  TTGGGAGGGAAAGGGGGTCAACTTATGTCATGACTGTCATCACCTACCAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGGAAAGGGGGTCAACTTATGTCATGACTGTCATCACCTACCAA  991

seq1  AGAAAAATTTTATACCACAATGGAAAAACCATTGTCTCACCAACTCTACC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTTTATACCACAATGGAAAAACCATTGTCTCACCAACTCTACC  1041

seq1  TTGAAACAGCCCAGTGAAGTATCTTTGGAGTGTTTGCTTTTGCAGAGGCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACAGCCCAGTGAAGTATCTTTGGAGTGTTTGCTTTTGCAGAGGCA  1091

seq1  TTGAAGAGTGTCTCTTGAG  1115
      |||||||||||||||||||
seq2  TTGAAGAGTGTCTCTTGAG  1110