BAC Information

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BAC

Clone NameB6Ng01-190M13
Chromosome3 (Build37)
Map Location 23,719,453 - 23,720,612
singlet/doubletsinglet
Overlap geneEG635702
Upstream geneLOC623751, LOC100039548
Downstream geneEG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190M13.bB6Ng01-190M13.g
ACCGA014454GA014455
length1,161995
definitionB6Ng01-190M13.b B6Ng01-190M13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgaatcactactacatttttacatttatatctattcttaaat
aacttaaactacaaaataactaaatacatgtttcttttacttaatatcca
tattttagagatacttgagaatctatttcataagatctaagtgttacgaa
ttaaaaatcaaatacctgtattgtcattgacttcttcaattaatgaaaat
ttccttacctgaaaccttatttcttaaattctaatacttaatgcatgaaa
aaaaagtgcatgtgcctctgggttggaccctttggaattgtagatgaaag
ctgagaggaaagatgttaatggatttttgaaacaggcacgttggtacatg
tcacttgacatttattcctcactcagtgaatattctggcagacacattag
tccagtatccccaaaccaataccattcagtgaactgactggtatgcaaag
atcaagacctcttggagaagaatatgtcctcagcctaaattatacaagtg
tcagggagtctgggagataatcttacaatatcactaaatatttcacaatt
gtaaagttataaaggaaatatttaagatacaggactttgttacttttagc
acagaatatggaagaacatttacattttgatagcaaaagaagaaataaca
tatttgcatccttcactcaatcagaaggaaaattggggagggagtgggat
taaaaatgtggtttttagtgaatctctttactaacctcaaaagacaggaa
atgttgggtaatttttttcgtagaatttgaaaatcgtttttcaattccca
aatgcagatgaggtacatttaaaacaaagctattgctactgttcaacagc
tgtgaataaataacgtctttgaagctaagctacacatgctctgccctcct
gtggctttgtgagcacataaagcatcagttcagagaagccttatgcctgt
cagcatgtgggaattcgtcttgtcattcctgctattttcatttttattac
tgtatatacattttaagatacatacatgtatgtatatatttatgcatgat
tacctgttcaaatttatatatacagatttgttatatgtcatacaaggtta
tatggtatacagacaggatcacggtcacttaatacattacacacaatatt
tactactgttc

gaattctttgtttagctctgtacccaaaaatttaaaattaggtactttct
tcatttacatttccaatgttatcccaaaagtctcccatacccccccccac
tcccctacccacccactcccacttctttgttctgacattcccctgtactg
aggcatataaagtttgcaagaccaatgggcctctctttccaatgatggcc
gactaggccagcttctgctacatatgcagctagagacaagaactctgggg
gatactggttagttcatattgttgttctacctatagggttgtagacccct
ttagctccttggtactttctctagctcctccattaggggtcctgtgatcc
atccaatagctgactgtgagcatccactattgtgtttgctaggccccggc
atagccttacaagagatagctatatcagggtcctttcagcaaaatctttc
tagtgtatgcaatggtgtcagcgtttggaggctgattatgggataggtcc
ccgggtatggcagtctctagatggtccatccttttgtctcagctccaaac
tttatctctgtaactccttccatgggtgatgctccactatgttcatagca
gccttatttataatagccagaagctggaaagaacccagatgcccctcaac
agaggaatggatacagaaaatgtggtacatttacacaatggagtactact
cagctattaaaaacaatgaatttatgaaattcctaggcaaatggatggac
ctgtagggcatcatcctgagtgaggtaacccaatcacaaaaagaactcac
atgatatgtactcactgataagtggaattagcccagaaacttagaatacc
caagatacaagatacaatttgcaaaacacatgaaactcaagaacaatgaa
gaccaagtgtggacactttgccccttcttagaactgggatctgtaccaaa
ttttaatagggtatttgattctttggagtctaatttctgagtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23719453_23720612
seq2: B6Ng01-190M13.b_42_1202

seq1  GAATTCATTGAATCACTACTACATTTTTACATTTATATCTATTCTTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAATCACTACTACATTTTTACATTTATATCTATTCTTAAAT  50

seq1  AACTTAAACTACAAAATAACTAAATACATGTTTCTTTTACTTAATATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAACTACAAAATAACTAAATACATGTTTCTTTTACTTAATATCCA  100

seq1  TATTTTAGAGATACTTGAGAATCTATTTCATAAGATCTAAGTGTTACGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGAGATACTTGAGAATCTATTTCATAAGATCTAAGTGTTACGAA  150

seq1  TTAAAAATCAAATACCTGTATTGTCATTGACTTCTTCAATTAATGAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATCAAATACCTGTATTGTCATTGACTTCTTCAATTAATGAAAAT  200

seq1  TTCCTTACCTGAAACCTTATTTCTTAAATTCTAATACTTAATGCATGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTACCTGAAACCTTATTTCTTAAATTCTAATACTTAATGCATGAAA  250

seq1  AAAAAGTGCATGTGCCTCTGGGTTGGACCCTTTGGAATTGTAGATGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGCATGTGCCTCTGGGTTGGACCCTTTGGAATTGTAGATGAAAG  300

seq1  CTGAGAGGAAAGATGTTAATGGATTTTTGAAACAGGCACGTTGGTACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGGAAAGATGTTAATGGATTTTTGAAACAGGCACGTTGGTACATG  350

seq1  TCACTTGACATTTATTCCTCACTCAGTGAATATTCTGGCAGACACATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGACATTTATTCCTCACTCAGTGAATATTCTGGCAGACACATTAG  400

seq1  TCCAGTATCCCCAAACCAATACCATTCAGTGAACTGACTGGTATGCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTATCCCCAAACCAATACCATTCAGTGAACTGACTGGTATGCAAAG  450

seq1  ATCAAGACCTCTTGGAGAAGAATATGTCCTCAGCCTAAATTATACAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGACCTCTTGGAGAAGAATATGTCCTCAGCCTAAATTATACAAGTG  500

seq1  TCAGGGAGTCTGGGAGATAATCTTACAATATCACTAAATATTTCACAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAGTCTGGGAGATAATCTTACAATATCACTAAATATTTCACAATT  550

seq1  GTAAAGTTATAAAGGAAATATTTAAGATACAGGACTTTGTTACTTTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTTATAAAGGAAATATTTAAGATACAGGACTTTGTTACTTTTAGC  600

seq1  ACAGAATATGGAAGAACATTTACATTTTGATAGCAAAAGAAGAAATAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATATGGAAGAACATTTACATTTTGATAGCAAAAGAAGAAATAACA  650

seq1  TATTTGCATCCTTCACTCAATCAGAAGGAAAATTGGGGAGGGAGTGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCATCCTTCACTCAATCAGAAGGAAAATTGGGGAGGGAGTGGGAT  700

seq1  TAAAAATGTGGTTTTTAGTGAATCTCTTTACTAACCTCAAAAGACAGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTGGTTTTTAGTGAATCTCTTTACTAACCTCAAAAGACAGGAA  750

seq1  ATGTTGGGTAATTTTTTTCGTAGAATTTGAAAATCGTTTTTCAATTCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGGTAATTTTTTTCGTAGAATTTGAAAATCGTTTTTCAATTCCCA  800

seq1  AATGCAGATGAGGTACATTTAAAACAAAGCTATTGCTACTGTTCAACAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGATGAGGTACATTTAAAACAAAGCTATTGCTACTGTTCAACAGC  850

seq1  TGTGAATAAATAACGTCTTTGAAGCTAAGCTACACATGCTCTGCCCTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATAAATAACGTCTTTGAAGCTAAGCTACACATGCTCTGCCCTCCT  900

seq1  GTGGCTTTGTGAGCACATAAAGCATCAGGTTCAGAGAAGCCTTATGCCTG  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTGGCTTTGTGAGCACATAAAGCATCA-GTTCAGAGAAGCCTTATGCCTG  949

seq1  TCAGCATGTGGGAATTCGTTCTTGTTCATTCCTGCTATTTTCATTTTTAT  1000
      |||||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  TCAGCATGTGGGAATTCG-TCTTG-TCATTCCTGCTATTTTCATTTTTAT  997

seq1  TACTTGTATATACATTTTAAGATACATACATGTATGTATATATTTATGCA  1050
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAC-TGTATATACATTTTAAGATACATACATGTATGTATATATTTATGCA  1046

seq1  TGATTACCTGTTCAAATTTATATATACAGATTTG-TATATGTCATACA--  1097
      |||||||||||||||||||||||||||||||||| |||||||||||||  
seq2  TGATTACCTGTTCAAATTTATATATACAGATTTGTTATATGTCATACAAG  1096

seq1  GGTATAT-GTATACAAGAACAGAT-ACAGTCACTTAATACA-TACACAC-  1143
      | ||||| |||||| |||   ||| || ||||||||||||| ||||||| 
seq2  GTTATATGGTATAC-AGACAGGATCACGGTCACTTAATACATTACACACA  1145

seq1  ATATATACATACTGTTC  1160
      |||| ||| ||||||||
seq2  ATATTTAC-TACTGTTC  1161


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