BAC Information

Click to search

BAC

Clone NameB6Ng01-190O14
Chromosome3 (Build37)
Map Location 48,801,982 - 48,802,610
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666202, LOC666208, 1700018B24Rik, LOC100039404
Downstream geneEG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779, Pcdh18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190O14.b
ACCGA014548
length1,140
definitionB6Ng01-190O14.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataagttcagaatggcttgtagtggaagtattactagagtttca
taaacagtttatcataatactacagtcatctgattattttgtgaactttg
tgtgtgtgtttcaccatgaactactgcctgtagcatgtatcctcatgttt
tcttgaatcatgaagattgaacacactgatgagtagcaatgaggttcaat
ggttgagcagttttcaagcaacaggattttgtgactaaagcaatagagtc
tttctccaattagcagtgttgttctcagagaaacatcagaatgatgtggc
aacattttcaacaaaagcacgggaatgaaaagtggaagaaaaacatgaaa
ccatagtgcaaaataaagaatcacaaggagatttgcttacagtttaatgc
ctgaaacaaaaaagttccacttgtcctcagctacaaacatacaagctgag
cacctccagtttctcctgatttgttacatgcttgggactataacacgcat
gttgatttgggaattcggtataagtttcaacatctatgttaactcataga
ttagaatccttgaaaaacaaccattgccctacgttttgaatctatctatc
tatctatctatctatctatctatctatctatctatctatctatctatcta
tctatctatctatctatctacctacctacctacctacctacctacctacc
tacctacctacctacctacctacctacctatctatctatctatctatcta
tctatctatctatctatctatctatctatctatctatcatctatctatac
aaaactaaaaattataatcatctaccttctagattatttccaatagtata
tttagcagttctctgtttctcttcttgcttcatttctattttactcccta
ttctaaagctgtaacttagagatatggggaagatggcaaaaggctatagc
ctcatccaaacagtaaacgccaactctgcatagctttgtttctcattaag
taaatcctcctctcttgggaaagagatgttcagaaggttagtactgccta
ttatcatgtctggtgtacctctgttgatgattattcagaagatgcctaaa
ttctgggaatattctttaaacctgaacaaatacaatattt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_48801982_48802610
seq2: B6Ng01-190O14.b_554_1187 (reverse)

seq1  AAATATTGTATTTTGTCAGTTTTAAGAAATATTTCCCCAGATTTTTAGCA  50
      |||||||||||||  |||| |||||  ||||||  |||||| |||  |||
seq2  AAATATTGTATTTGTTCAGGTTTAAAGAATATT--CCCAGAATTTAGGCA  48

seq1  TC-TCTGAAATTATCATC-ACAGAAGGTACA-CAGACATGATAATAAGCA  97
      || |||| ||| |||||| |||| ||||||| |||||||||||||| |||
seq2  TCTTCTG-AATAATCATCAACAG-AGGTACACCAGACATGATAATAGGCA  96

seq1  GTACTAA-CTTCTGAACATTCTCTTTCCCAAGAGAGGA-GATTTACTTAA  145
      ||||||| |||||||||| ||||||||||||||||||| |||||||||||
seq2  GTACTAACCTTCTGAACA-TCTCTTTCCCAAGAGAGGAGGATTTACTTAA  145

seq1  TGAGAAACAAAGCTATGCAGAGTTGGCGTTTACTGTTTGGATGA-GCTAT  194
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGAGAAACAAAGCTATGCAGAGTTGGCGTTTACTGTTTGGATGAGGCTAT  195

seq1  AGCCTTTTGCCATCTT-CCCATATCTCTAAGTTACAGCTTTAGAATAGGG  243
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGCCTTTTGCCATCTTCCCCATATCTCTAAGTTACAGCTTTAGAATAGGG  245

seq1  AGTAAAATAG-AATGAAGCAAGAAGAGAAACAGAGAACTGCTAAATATAC  292
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATAGAAATGAAGCAAGAAGAGAAACAGAGAACTGCTAAATATAC  295

seq1  TATTGG-AATAATCTAGAAGGTAGATGATTATAA-TTTTAGTTTTGTATA  340
      |||||| ||||||||||||||||||||||||||| |||||||||||||||
seq2  TATTGGAAATAATCTAGAAGGTAGATGATTATAATTTTTAGTTTTGTATA  345

seq1  GATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  395

seq1  AGATAGATAGATAGATAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAG  445

seq1  GTAGGTAGGTAGGTAGGTAGGTAGGTAGATAGATAGATAGATAGATAGAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTAGGTAGGTAGGTAGGTAGGTAGATAGATAGATAGATAGATAGAT  495

seq1  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG  545

seq1  ATAGATTCAAAACGTAGGGCAATGGTTGTTTTTCAAGGATTCTAATCTAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTCAAAACGTAGGGCAATGGTTGTTTTTCAAGGATTCTAATCTAT  595

seq1  GAGTTAACATAGATGTTGAAACTTATACCGAATTCCCAA  629
      |||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAACATAGATGTTGAAACTTATACCGAATTCCCAA  634