BAC Information

Click to search

BAC

Clone NameB6Ng01-191D13
Chromosome3 (Build37)
Map Location 23,605,022 - 23,606,201
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623751, LOC100039548
Downstream geneEG635702, EG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191D13.bB6Ng01-191D13.g
ACCGA014774GA014775
length1,171737
definitionB6Ng01-191D13.b B6Ng01-191D13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatttgtaaagttgcactcagatatagttgagttctccactga
tagatattaactgttattagtcaggtcttcatcattataaggaaatgcct
aagataatttatctttgaaaaaaatgttattttttttacagttttggata
cataagtctaaaattggtgggtgcattatttgtacctgttactgaatgtc
aagtgtagcagaaacaactgctcaactcagtcatgaagtgaagagagaag
agggcaaggcagagagtggtattccagtgtccttgtctgcagcacctaag
atcacccattaggacccagttggcaaggaagacaggacctcctgatcaat
gcagttatggagaacaaaacgctaattaatggagaacataactcatccaa
agtatgcagccatctgaggaaacttctgggatttgaatgacttcaattga
atcctgccctagacacttaacatatgtcacttatcagttcaggcacaagt
ctttatttatggtcttcctaaggtgctattgcatgctgttggtctctact
ttacccatattctcacattaacttctttctacagtagactgacacttgtg
gaattgacctgaactcaaaatagaagtaagacaataccaggagaactcaa
gacaaaaaccttccctgctttctatattatctaaatattctctgaaaatt
cttattttttcttctcaaatgaaatgccaatattccaatgctgtaattta
gttcatacactaagattcaaggaaatgaatatttatgcccttccccagga
gctgaagcattttggcagttgctcaatatactagctatgcttttgtaaca
atagtgctgactcagtgttttcattcaagtgcaggtttgcctaatggtgg
cctcctgcagtaatatggacatataagtaggtaattcaatggatacatca
gttttattatcatcaagcacaggtttcatagtgacttgcagtcattttct
tattataatttctctcttttcccttatgtcttactaacacacaggtgaac
aaaacccacatgatacacatttagctttaggaaaaactgtcagtataact
accttatgaggagaaagtcttttgtcccatacctattgcatattatcatt
ttagcttggaatgttagtatc

gaattctcaccagaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcatg
aaagaatgaagactgaagtgtggacactatgcccctcccttagatttggg
atcaaaacacccatggaaggagttacagatcctaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23605022_23606201
seq2: B6Ng01-191D13.b_41_1211

seq1  GAATTCTTATTTGTAAAGTTGCACTCAGATATAGTTGAGTTCTCCACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTGTAAAGTTGCACTCAGATATAGTTGAGTTCTCCACTGA  50

seq1  TAGATATTAACTGTTATTAGTCAGGTCTTCATCATTATAAGGAAATGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTAACTGTTATTAGTCAGGTCTTCATCATTATAAGGAAATGCCT  100

seq1  AAGATAATTTATCTTTGAAAAAAATGTTATTTTTTTTACAGTTTTGGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATTTATCTTTGAAAAAAATGTTATTTTTTTTACAGTTTTGGATA  150

seq1  CATAAGTCTAAAATTGGTGGGTGCATTATTTGTACCTGTTACTGAATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTCTAAAATTGGTGGGTGCATTATTTGTACCTGTTACTGAATGTC  200

seq1  AAGTGTAGCAGAAACAACTGCTCAACTCAGTCATGAAGTGAAGAGAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAGCAGAAACAACTGCTCAACTCAGTCATGAAGTGAAGAGAGAAG  250

seq1  AGGGCAAGGCAGAGAGTGGTATTCCAGTGTCCTTGTCTGCAGCACCTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAGGCAGAGAGTGGTATTCCAGTGTCCTTGTCTGCAGCACCTAAG  300

seq1  ATCACCCATTAGGACCCAGTTGGCAAGGAAGACAGGACCTCCTGATCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCATTAGGACCCAGTTGGCAAGGAAGACAGGACCTCCTGATCAAT  350

seq1  GCAGTTATGGAGAACAAAACGCTAATTAATGGAGAACATAACTCATCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTATGGAGAACAAAACGCTAATTAATGGAGAACATAACTCATCCAA  400

seq1  AGTATGCAGCCATCTGAGGAAACTTCTGGGATTTGAATGACTTCAATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCAGCCATCTGAGGAAACTTCTGGGATTTGAATGACTTCAATTGA  450

seq1  ATCCTGCCCTAGACACTTAACATATGTCACTTATCAGTTCAGGCACAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCCCTAGACACTTAACATATGTCACTTATCAGTTCAGGCACAAGT  500

seq1  CTTTATTTATGGTCTTCCTAAGGTGCTATTGCATGCTGTTGGTCTCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTATGGTCTTCCTAAGGTGCTATTGCATGCTGTTGGTCTCTACT  550

seq1  TTACCCATATTCTCACATTAACTTCTTTCTACAGTAGACTGACACTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCATATTCTCACATTAACTTCTTTCTACAGTAGACTGACACTTGTG  600

seq1  GAATTGACCTGAACTCAAAATAGAAGTAAGACAATACCAGGAGAACTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGACCTGAACTCAAAATAGAAGTAAGACAATACCAGGAGAACTCAA  650

seq1  GACAAAAACCTTCCCTGCTTTCTATATTATCTAAATATTCTCTGAAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAACCTTCCCTGCTTTCTATATTATCTAAATATTCTCTGAAAATT  700

seq1  CTTATTTTTTCTTCTCAAATGAAATGCCAATATTCCAATGCTGTAATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTTCTTCTCAAATGAAATGCCAATATTCCAATGCTGTAATTTA  750

seq1  GTTCATACACTAAGATTCAAGGAAATGAATATTTATGCCCTTCCCCAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATACACTAAGATTCAAGGAAATGAATATTTATGCCCTTCCCCAGGA  800

seq1  GCTGAAGCATTTTGGCAGTTGCTCAATATACTAGCTATGCTTTTGTAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGCATTTTGGCAGTTGCTCAATATACTAGCTATGCTTTTGTAACA  850

seq1  ATAGTGCTGACTCAGTGTTTTCATTCAAGTGCAGGTTTGCCTAATGGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCTGACTCAGTGTTTTCATTCAAGTGCAGGTTTGCCTAATGGTGG  900

seq1  CCTCCTGCAGTAATATGGACATATAAGTAGGTAATTCAATGGATACATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCAGTAATATGGACATATAAGTAGGTAATTCAATGGATACATCA  950

seq1  GTTTTATTATCATCAAGCACAGGTTTCATAGTGACTTGCAGTCATTTTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTATCATCAAGCACAGGTTTCATAGTGACTTGCAGTCATTTTCT  1000

seq1  TAATTATAATTTCTCTCTTTTCCCTTATGTTCTTTACCTAACACACAGGT  1050
      | ||||||||||||||||||||||||||| ||||   |||||||||||||
seq2  T-ATTATAATTTCTCTCTTTTCCCTTATG-TCTT--ACTAACACACAGGT  1046

seq1  G-ACAAAACCCACATGATTACACAATTAGC-TTAGGAAAAACTGTCAGTA  1098
      | ||||||||||||||| |||||| ||||| |||||||||||||||||||
seq2  GAACAAAACCCACATGA-TACACATTTAGCTTTAGGAAAAACTGTCAGTA  1095

seq1  TAACTTACTTATGA-GAGAAAGTCTTTTGTTCCCCATA-CTATTGCATAT  1146
      |||||  ||||||| |||||||||||||||  |||||| |||||||||||
seq2  TAACTACCTTATGAGGAGAAAGTCTTTTGT--CCCATACCTATTGCATAT  1143

seq1  TATTTCTATTTTTAGCTTGAAAAATGTTATTATC  1180
      ||    |  ||||||||||   ||||||| ||||
seq2  TA----TCATTTTAGCTTG--GAATGTTAGTATC  1171


| Home | SequenceCutter | Blast | Download |