BAC Information

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BAC

Clone NameB6Ng01-191E02
Chromosome3 (Build37)
Map Location 66,211,054 - 66,212,206
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1, LOC625048, Veph1, Tpi-rs2, Ptx3
Downstream geneLOC625115, Shox2, Rsrc1, Mlf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191E02.bB6Ng01-191E02.g
ACCGA014795GA014796
length1,2031,157
definitionB6Ng01-191E02.b B6Ng01-191E02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttcttttatttctttcttcagggacttgaagtttttatcata
cagatctttcactttccttcgttagagtcacgccgagatatttttatatt
tatttgtggctattgaagaagggtgttgtttccctaatttcttttcctca
gcctgttattctttgtgtagagaatggcaatgactttgtttgagtttaat
tataatccagctactcccgaagctgtttaatcaggtttaggagctctctg
ttggaattttaaggtcacttatttatactcatccatattcatctctgcaa
aggaaattgaacctcccttccagttgtatccccccttgactcctcttgtt
agg
gaattcctgcatcccgctgaagtggcatgcaatataggaagtggatacca
tgagctatgcacagtgctggacagggtggggtaaggaagatgagaacatg
ctccctgctcccaaaagcaggctgtgcctactacaaggcactgtggggca
gagcaacatgatacatctgtgccttgggttttcttcatatttgtaaaacg
gaaagaatacctactagctatgttgggtgatataggaggaaaaaatcatg
gttaatacacagtctggtacctaaagtatgtgtctcacacaccctcggtt
gtaagtcaccactgtcagacagaccctgctcttccagtgtctgtgatgta
gtacgacctagagcatggctgactgagtctctcacacatgagagggtgaa
tagactatgagtttaactttatgagaatcaatccaagttgcttggcattc
aaccctctggaaagggcctctctctttgtctctctttgtctgtctctttg
tctgtctctgtctctgtctgtctctgtctgtctctgtctctctctgtctc
tctctctctgcctctctctctgtctctctctctctctccctctttctctc
atgtctgtctctatcctctcctctcctctctctcaccccagggtgagagg
ggtgaagagacaggcagatgagtcttgagaagatctattacagtgcttgg
agcagatgatcaatggttctaatttagctcctgggttgagcaggggtgat
cccgtggtttggatgtacaatgtcctcattggtttgtgtatttcagcatt
ttggtttcccagatggaccattgatttgaagagcttactgaaacctttag
aaggtgaagcttaactggaagagttggtcactgttgaggcaggtcttacc
agtgattgcctggcctcattccaggctgagtgttcctcggtgttttcttg
ttctgctgagatgttaagcaatcaccctcaacgtagactggaagctgctg
tccccaccagagccattagtcagaataagccctccctttagttatctctt
gtactgatcccacgccatgttagcagaagtaacgatcccaatgaagcagc
acttaaattcatccagctactgaaggctgggagatccaaccccgaggtgc
tgtccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_66211054_66212206
seq2: B6Ng01-191E02.g_66_1222 (reverse)

seq1  GTGG-CAGCA-CTGGGGGTTGGGACTCCTCCAAGCTTCAGTAGCTGGTTT  48
      |||| ||||| || ||||||||  |||  |||  |||||||||||||  |
seq2  GTGGACAGCACCTCGGGGTTGGATCTC--CCAGCCTTCAGTAGCTGG-AT  47

seq1  GATATTAGTTGCTGC-TCATTGGTTTGGTTTCTTTTCTTGCTA--CTGTG  95
      ||  |||  |||||| |||||||  | ||| |||    |||||   ||  
seq2  GAATTTAAGTGCTGCTTCATTGGGATCGTTACTT---CTGCTAACATGGC  94

seq1  GTGAGATAAGTAACAGAGATAACTTAAGGGAGGGCTTATTCTGACTAATG  145
      ||| ||| ||||  |||||||||| |||||||||||||||||||||||||
seq2  GTGGGATCAGTACAAGAGATAACTAAAGGGAGGGCTTATTCTGACTAATG  144

seq1  GCTTCCTGGTGGGGACAGCAGC-TCCAGTCTACGTTGA-GGTGATTTGCT  193
      |||  ||||||||||||||||| ||||||||||||||| ||||| |||||
seq2  GCT--CTGGTGGGGACAGCAGCTTCCAGTCTACGTTGAGGGTGA-TTGCT  191

seq1  T-ACATCTCAGCAGAACAAG-AAACACCGA-GAACACTCAGCCTGGAATG  240
      | |||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  TAACATCTCAGCAGAACAAGAAAACACCGAGGAACACTCAGCCTGGAATG  241

seq1  AGGCCAGGCAATCACTTGTAAGACCTGCCTC-ACAGTGACCAACTTCTTC  289
      |||||||||||||||| |||||||||||||| |||||||||||| |||||
seq2  AGGCCAGGCAATCACTGGTAAGACCTGCCTCAACAGTGACCAAC-TCTTC  290

seq1  CAGTTAAGCTTCACCTTCT-AAGGGTTCAGTAAGCTCTTCAAATCAATGG  338
      ||||||||||||||||||| |||| |||||||||||||||||||||||||
seq2  CAGTTAAGCTTCACCTTCTAAAGGTTTCAGTAAGCTCTTCAAATCAATGG  340

seq1  TCCATCTGGGAA--CCAAATGCTGAAATACACAAACCAATGAGGACATTG  386
      ||||||||||||  | ||||||||||||||||||||||||||||||||||
seq2  TCCATCTGGGAAACCAAAATGCTGAAATACACAAACCAATGAGGACATTG  390

seq1  TACATCCAAACCACGGGATCACCCCTGCTCAACCCAGGAGCTAAATTAGA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCAAACCACGGGATCACCCCTGCTCAACCCAGGAGCTAAATTAGA  440

seq1  ACCATTGATCATCTGCTCCAAGCACTGTAATAGATCTTCTCAAGACTCAT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGATCATCTGCTCCAAGCACTGTAATAGATCTTCTCAAGACTCAT  490

seq1  CTGCCTGTCTCTTCACCCCTCTCACCCTGGGGTGAGAGAGAGGAGAGGAG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTCTCTTCACCCCTCTCACCCTGGGGTGAGAGAGAGGAGAGGAG  540

seq1  AGGATAGAGACAGACATGAGAGAAAGAGGGAGAGAGAGAGAGAGACAGAG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGAGACAGACATGAGAGAAAGAGGGAGAGAGAGAGAGAGACAGAG  590

seq1  AGAGAGGCAGAGAGAGAGAGACAGAGAGAGACAGAGACAGACAGAGACAG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCAGAGAGAGAGAGACAGAGAGAGACAGAGACAGACAGAGACAG  640

seq1  ACAGAGACAGAGACAGACAAAGAGACAGACAAAGAGAGACAAAGAGAGAG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACAGAGACAGACAAAGAGACAGACAAAGAGAGACAAAGAGAGAG  690

seq1  GCCCTTTCCAGAGGGTTGAATGCCAAGCAACTTGGATTGATTCTCATAAA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTCCAGAGGGTTGAATGCCAAGCAACTTGGATTGATTCTCATAAA  740

seq1  GTTAAACTCATAGTCTATTCACCCTCTCATGTGTGAGAGACTCAGTCAGC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACTCATAGTCTATTCACCCTCTCATGTGTGAGAGACTCAGTCAGC  790

seq1  CATGCTCTAGGTCGTACTACATCACAGACACTGGAAGAGCAGGGTCTGTC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCTAGGTCGTACTACATCACAGACACTGGAAGAGCAGGGTCTGTC  840

seq1  TGACAGTGGTGACTTACAACCGAGGGTGTGTGAGACACATACTTTAGGTA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTGGTGACTTACAACCGAGGGTGTGTGAGACACATACTTTAGGTA  890

seq1  CCAGACTGTGTATTAACCATGATTTTTTCCTCCTATATCACCCAACATAG  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTGTGTATTAACCATGATTTTTTCCTCCTATATCACCCAACATAG  940

seq1  CTAGTAGGTATTCTTTCCGTTTTACAAATATGAAGAAAACCCAAGGCACA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGGTATTCTTTCCGTTTTACAAATATGAAGAAAACCCAAGGCACA  990

seq1  GATGTATCATGTTGCTCTGCCCCACAGTGCCTTGTAGTAGGCACAGCCTG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATCATGTTGCTCTGCCCCACAGTGCCTTGTAGTAGGCACAGCCTG  1040

seq1  CTTTTGGGAGCAGGGAGCATGTTCTCATCTTCCTTACCCCACCCTGTCCA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGGAGCAGGGAGCATGTTCTCATCTTCCTTACCCCACCCTGTCCA  1090

seq1  GCACTGTGCATAGCTCATGGTATCCACTTCCTATATTGCATGCCACTTCA  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGCATAGCTCATGGTATCCACTTCCTATATTGCATGCCACTTCA  1140

seq1  GCGGGATGCAGGAATTC  1153
      |||||||||||||||||
seq2  GCGGGATGCAGGAATTC  1157