BAC Information

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BAC

Clone NameB6Ng01-191G03
Chromosome3 (Build37)
Map Location 29,710,279 - 29,900,150
singlet/doubletdoublet
Overlap geneLOC100040676, Evi1
Upstream geneGm1527, 6130401L20Rik
Downstream geneMds1, LOC100040727, LOC100040734, LOC100040749, Arpm1, Mynn, Lrrc34, 4930558O21Rik, E230002P03Rik, Samd7, Tloc1, Gpr160, Phc3, LOC100040809, Prkci
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191G03.bB6Ng01-191G03.g
ACCGA014887GA014888
length1,1511,113
definitionB6Ng01-191G03.b B6Ng01-191G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,710,279 - 29,711,433)(29,899,021 - 29,900,150)
sequence
gaattctaaaccataaaagtaggctgataatgtctttataccctttgaat
taggggaggtttgaaaaatgagttgaaaatgtcaatagctcagccttctg
cctagaacctaatgagtttctgaaaacagtaaactcagagctgaaaccct
ctgcatgaagctttctgaaggtaagattcagacatgttcattctttttct
gaccccagtaaatcagtgtcaccgtgtcaccattcaatcccatattattt
cttccattttggccatctctcccacctctgctttaaatattgtttcaaaa
tgaccttgtagtcatgataatagtagtcatttacctgtcaccctgcactg
ctcagccattgcacataatctccagagcagcagtggaaggcaggtgttcc
cctgcttggaggttgggccaggtcatatttcattaaatgtccccatgaaa
cctagcactgtgccttggatacacaagaccctcgtcacacatgttttgat
tgactgaaactcggcagtatgtcccactccctttctttgtaatgtatgta
ggtgtttgatttataaggaatttctgtccctggatgtggccggctattga
atttatgtgtgacaaggaaaccatacagtttggcaactctatagtgatag
gtgatgtgtgattcatttgggggaagataaacattttctattcagacttt
gaatacctgggcctacggttagctaatcaagtctctgcatggctgaacag
acatcttcaaagggactttactctaaattactccattgtgtgtttctaga
tgctgtcctgttgcatattgataatatttcttatagccactgcttaaagt
aggaaacaaacataatttagactttactcatcttaaagaaagccagtggt
gttataaacctaagtccatgctagaaaccaggaccccaagaccctttgag
aggccaggatgcgctcacataagttacatctgtctgtaacgtaaggcaca
caaagagagactcagagagtgttgcctttcttaaagaatgtgtcaagcag
gaatcctaagttggtctggaagacgtatagaataggtggccgggccatgg
aacagcaaacctgcaggacaatggatcagcctctctgaatccatctccct
c
gaattcatcacaaaccctaggacattttaattttggatccagttaagttt
ttccacacaactacaatggggaaggagaactgttaactcttttatggaat
ttagcagacaaatcaactcccatttttttccacagcacaaaccccagaaa
agtagtgtattttcttctgctgcataactcagatgacacagggtttacag
gcttgcagtgcagccaagtctctggggatgccctggtcttaaaggcgggc
tgtctatagcatccacaccggtaagcgcctgcacacaccactcctgacgc
tgtcagtttcttatttaccacaagatgtttttataactcgaaaggagaga
catagcatttcctgagaatagagacacagcatttcctgaaggaggaggtt
cattcagggttgtctcccatcgttttcccatgtaattcagtttgagggga
aacaaaaaaaaaaaaaaaaaaaaaaaaggaaaagaaaagccattttgtct
tgtattataggacttctctcacatgtcaaaagcttgatagtatatttcta
ttgtcgtaggcatatctgggctcaagtatttgaattatactttggtgcca
ttctaattagaaaaggccatggagtttgaatgtgggtcttctaagatccc
agggaatggcagacagcaaggaccacaggggcagaaaacaccttgagtgg
aagaccggaccctcgagggtgtggagggtgcgacttcgaggcacattctt
attgctgcatggggaagcatgcccagaatttgccctcgttatgactggcg
cttgccagttcttttcaaaccccagtttcatgagcaccataaaaattcag
ttaaaatagaaaagaacaccctgaagttaaaatccactctgctttgccct
tgcctttcatggcctggaatgtcaccttttacctcagtaataagcaacgt
caacactcttcatgtcttttatattttatgcactcaatatctcacatgac
atctgacactaaagggtatacagagtgatctatgtcccggcaagagaatg
tctcataataataggttgcaagtgtatctatccattccttgtcttgaact
gctcacagtggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_29710279_29711433
seq2: B6Ng01-191G03.b_44_1194

seq1  GAATTCTAAACCATAAAAGTAGGCTGATAATGTCTTTATACCCTTTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAACCATAAAAGTAGGCTGATAATGTCTTTATACCCTTTGAAT  50

seq1  TAGGGGAGGTTTGAAAAATGAGTTGAAAATGTCAATAGCTCAGCCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGAGGTTTGAAAAATGAGTTGAAAATGTCAATAGCTCAGCCTTCTG  100

seq1  CCTAGAACCTAATGAGTTTCTGAAAACAGTAAACTCAGAGCTGAAACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAACCTAATGAGTTTCTGAAAACAGTAAACTCAGAGCTGAAACCCT  150

seq1  CTGCATGAAGCTTTCTGAAGGTAAGATTCAGACATGTTCATTCTTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGAAGCTTTCTGAAGGTAAGATTCAGACATGTTCATTCTTTTTCT  200

seq1  GACCCCAGTAAATCAGTGTCACCGTGTCACCATTCAATCCCATATTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCAGTAAATCAGTGTCACCGTGTCACCATTCAATCCCATATTATTT  250

seq1  CTTCCATTTTGGCCATCTCTCCCACCTCTGCTTTAAATATTGTTTCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTTTGGCCATCTCTCCCACCTCTGCTTTAAATATTGTTTCAAAA  300

seq1  TGACCTTGTAGTCATGATAATAGTAGTCATTTACCTGTCACCCTGCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGTAGTCATGATAATAGTAGTCATTTACCTGTCACCCTGCACTG  350

seq1  CTCAGCCATTGCACATAATCTCCAGAGCAGCAGTGGAAGGCAGGTGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCATTGCACATAATCTCCAGAGCAGCAGTGGAAGGCAGGTGTTCC  400

seq1  CCTGCTTGGAGGTTGGGCCAGGTCATATTTCATTAAATGTCCCCATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTGGAGGTTGGGCCAGGTCATATTTCATTAAATGTCCCCATGAAA  450

seq1  CCTAGCACTGTGCCTTGGATACACAAGACCCTCGTCACACATGTTTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCACTGTGCCTTGGATACACAAGACCCTCGTCACACATGTTTTGAT  500

seq1  TGACTGAAACTCGGCAGTATGTCCCACTCCCTTTCTTTGTAATGTATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAAACTCGGCAGTATGTCCCACTCCCTTTCTTTGTAATGTATGTA  550

seq1  GGTGTTTGATTTATAAGGAATTTCTGTCCCTGGATGTGGCCGGCTATTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTGATTTATAAGGAATTTCTGTCCCTGGATGTGGCCGGCTATTGA  600

seq1  ATTTATGTGTGACAAGGAAACCATACAGTTTGGCAACTCTATAGTGATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTGTGACAAGGAAACCATACAGTTTGGCAACTCTATAGTGATAG  650

seq1  GTGATGTGTGATTCATTTGGGGGAAGATAAACATTTTCTATTCAGACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTGTGATTCATTTGGGGGAAGATAAACATTTTCTATTCAGACTTT  700

seq1  GAATACCTGGGCCTACGGTTAGCTAATCAAGTCTCTGCATGGCTGAACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACCTGGGCCTACGGTTAGCTAATCAAGTCTCTGCATGGCTGAACAG  750

seq1  ACATCTTCAAAGGGACTTTACTCTAAATTACTCCATTGTGTGTTTCTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCAAAGGGACTTTACTCTAAATTACTCCATTGTGTGTTTCTAGA  800

seq1  TGCTGTCCTGTTGCATATTGATAATATTTCTTATAGCCACTGCTTAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGCTGTCCTGTTGCATATTGATAATATTTCTTATAGCCACTGCTT-AAAG  849

seq1  TAGGAAACAAACATAATTTAGACTTTACTCATCTTAAAAGAAAGCCAGTG  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAGGAAACAAACATAATTTAGACTTTACTCATCTT-AAAGAAAGCCAGTG  898

seq1  GTGTTATAAACCTAAGTCCATGCTAGAAAACCAGGACCCCAAGACCCTTT  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTGTTATAAACCTAAGTCCATGCTAG-AAACCAGGACCCCAAGACCCTTT  947

seq1  GAGAGGCCAGGATGCGCTCACAATAAGTTACATCTGTCTGTAACGTAAGG  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGAGGCCAGGATGCGCTCAC-ATAAGTTACATCTGTCTGTAACGTAAGG  996

seq1  CACACAAAGAGAGACTCAGAGAGTG-TGCCTTTCTTAAAAGATGTGTCAA  1049
      ||||||||||||||||||||||||| |||||||||||||  ||||||| |
seq2  CACACAAAGAGAGACTCAGAGAGTGTTGCCTTTCTTAAAGAATGTGTC-A  1045

seq1  AGCAGGAAT-CTAAGTTGGTCCTGGAAGACCGTATAG-ATAGGTGG-CGG  1096
      ||||||||| |||||||||| |||||||| ||||||| |||||||| |||
seq2  AGCAGGAATCCTAAGTTGGT-CTGGAAGA-CGTATAGAATAGGTGGCCGG  1093

seq1  GGCATGGGACAGCAAAAACTGCAGGGGCCATTGATCAGCCTCTCTG-AGC  1145
      | ||||| ||||| ||| ||||| || | || |||||||||||||| | |
seq2  GCCATGGAACAGC-AAACCTGCA-GGACAATGGATCAGCCTCTCTGAATC  1141

seq1  CATCTCCCTC  1155
      ||||||||||
seq2  CATCTCCCTC  1151

seq1: chr3_29899021_29900150
seq2: B6Ng01-191G03.g_65_1177 (reverse)

seq1  ATCCAATGTGAGCAGTCCAAGGAACAAAAGAAAATGATAGATACAC-TGC  49
      ||||| |||||||||| ||||    | ||| ||  ||||||||||| |||
seq2  ATCCACTGTGAGCAGTTCAAG----ACAAGGAATGGATAGATACACTTGC  46

seq1  AA-CTATATATTATGAAGACAATTCTCTTTGCCGGGACATAGATCACTCC  98
      || |||| ||||||| |||| |||||| |||||||||||||||||||| |
seq2  AACCTAT-TATTATG-AGAC-ATTCTC-TTGCCGGGACATAGATCACT-C  91

seq1  TGTAATTACCCTTTAAGTGTCCAGATTGTCATGTGAAGAATATTGAGTGC  148
      ||||  |||||||| ||||| |||| ||||||||||   |||||||||||
seq2  TGTA--TACCCTTT-AGTGT-CAGA-TGTCATGTGA--GATATTGAGTGC  134

seq1  ATAAAATATAAAAGACATGGAAGAGTGTTGACGTTGGCTTTATTTACTGG  198
      |||||||||||||||||| |||||||||||||||| ||||   ||||| |
seq2  ATAAAATATAAAAGACAT-GAAGAGTGTTGACGTT-GCTT--ATTACT-G  179

seq1  AGGTAAAAGGTGACATTCCAGGCCATGAAAGGCAA-GGCAAAGCAGAGTG  247
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGGTAAAAGGTGACATTCCAGGCCATGAAAGGCAAGGGCAAAGCAGAGTG  229

seq1  GATTTTAACTTCAGGGTGTTCTTTTCTATTTTAACTGAATTTTTATGGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAACTTCAGGGTGTTCTTTTCTATTTTAACTGAATTTTTATGGTG  279

seq1  CTCATGAAACTGGGGTTTGAAAAGAACTGGCAAGCGCCAGTCATAACGAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAAACTGGGGTTTGAAAAGAACTGGCAAGCGCCAGTCATAACGAG  329

seq1  GGCAAATTCTGGGCATGCTTCCCCATGCAGCAATAAGAATGTGCCTCGAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATTCTGGGCATGCTTCCCCATGCAGCAATAAGAATGTGCCTCGAA  379

seq1  GTCGCACCCTCCACACCCTCGAGGGTCCGGTCTTCCACTCAAGGTG-TTT  446
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTCGCACCCTCCACACCCTCGAGGGTCCGGTCTTCCACTCAAGGTGTTTT  429

seq1  CTGCCCCTGTGGTCCTTGCTGTCTGCCATTCCCTGGGATCTTAGAAGACC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTGTGGTCCTTGCTGTCTGCCATTCCCTGGGATCTTAGAAGACC  479

seq1  CACATTCAAACTCCATGGCCTTTTCTAATTAGAATGGCACCAAAGTATAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCAAACTCCATGGCCTTTTCTAATTAGAATGGCACCAAAGTATAA  529

seq1  TTCAAATACTTGAGCCCAGATATGCCTACGACAATAGAAATATACTATCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATACTTGAGCCCAGATATGCCTACGACAATAGAAATATACTATCA  579

seq1  AGCTTTTGACATGTGAGAGAAGTCCTATAATACAAGACAAAATGGCTTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTGACATGTGAGAGAAGTCCTATAATACAAGACAAAATGGCTTTT  629

seq1  CTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGTTTCCCCTCAAACTGAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGTTTCCCCTCAAACTGAAT  679

seq1  TACATGGGAAAACGATGGGAGACAACCCTGAATGAACCTCCTCCTTCAGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGGAAAACGATGGGAGACAACCCTGAATGAACCTCCTCCTTCAGG  729

seq1  AAATGCTGTGTCTCTATTCTCAGGAAATGCTATGTCTCTCCTTTCGAGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGTGTCTCTATTCTCAGGAAATGCTATGTCTCTCCTTTCGAGTT  779

seq1  ATAAAAACATCTTGTGGTAAATAAGAAACTGACAGCGTCAGGAGTGGTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACATCTTGTGGTAAATAAGAAACTGACAGCGTCAGGAGTGGTGT  829

seq1  GTGCAGGCGCTTACCGGTGTGGATGCTATAGACAGCCCGCCTTTAAGACC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGCGCTTACCGGTGTGGATGCTATAGACAGCCCGCCTTTAAGACC  879

seq1  AGGGCATCCCCAGAGACTTGGCTGCACTGCAAGCCTGTAAACCCTGTGTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATCCCCAGAGACTTGGCTGCACTGCAAGCCTGTAAACCCTGTGTC  929

seq1  ATCTGAGTTATGCAGCAGAAGAAAATACACTACTTTTCTGGGGTTTGTGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGTTATGCAGCAGAAGAAAATACACTACTTTTCTGGGGTTTGTGC  979

seq1  TGTGGAAAAAAATGGGAGTTGATTTGTCTGCTAAATTCCATAAAAGAGTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAAAAATGGGAGTTGATTTGTCTGCTAAATTCCATAAAAGAGTT  1029

seq1  AACAGTTCTCCTTCCCCATTGTAGTTGTGTGGAAAAACTTAACTGGATCC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTCTCCTTCCCCATTGTAGTTGTGTGGAAAAACTTAACTGGATCC  1079

seq1  AAAATTAAAATGTCCTAGGGTTTGTGATGAATTC  1130
      ||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAATGTCCTAGGGTTTGTGATGAATTC  1113