BAC Information

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BAC

Clone NameB6Ng01-191J03
Chromosome3 (Build37)
Map Location 22,928,960 - 23,069,137
singlet/doubletdoublet
Overlap geneLOC623751
Upstream geneLOC100040353, Tbl1xr1, LOC545506, LOC675593, LOC100040378
Downstream geneLOC100039548, EG635702
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191J03.bB6Ng01-191J03.g
ACCGA015027GA015028
length1,104225
definitionB6Ng01-191J03.b B6Ng01-191J03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,928,960 - 22,930,072)(23,068,913 - 23,069,137)
sequence
gaattcttgcattttatttcaaatatatttttgatatagttatatataac
tctatgtatttttcttatctgtatgtactaaatacctgatgtattaaaaa
cctagagtaatatcatgaaataattcatttattttgtctacctgcttctg
tgtattgatctgtttcatttttcatattggtaatctgcatcttccctttt
ttcatccatttgtatactaagcacttattataatcataaaatattttgta
acaagtagatattaaattatatacctttagattcactaatttctgctctt
ctaaaaatatcttattttcttaggtggatgtgtaagaaattggttttagg
ccctactccctctaaataattttttattttattatgttttaaatgagtgt
ttgcctgtgtttgtgtctgtacaccatgtggccatggagaccaagagatt
ggtgtcaaattccccagtactgtggttagaaatatctgtgggccaccaca
taggtgttgggacttcctaactgctgagccattcattaattaggtcttta
tttctttaagaactacatgaagttgcattttccatctaagcactctgttc
tatgagttgaaatactcaataattttggaatacatttagtttacactttg
aacttcttctttgaccacataaaagtaaatcttatcttttactgatttaa
tttttttacattttggtatttacctattaataccatgtgactactaaaca
taatttgttccattttttctttcatatttatttattctactttttggctc
agtttgtggtaaatttgggtgacttttctgttttcttaaaaataaacata
tatctcttatgtttatagtcttcagctataatttattgcttcccgctatg
ctatttttgctgtctaaatgatgcctagacagacatccatttttggtgct
aggtctactgattgcagagtgaagactgttgaaactattcagtgttcaaa
atatccatcctggttatgtcatatttgtttgtctttccttggcttgtcac
ttcatttcttaattttaaatttaaaaagatttagttttgagaatgaaact
aaag

cttgggatgggtacacctgtgcgggtaaggaaggcacctgtccccattct
gcgggccaaggcatgaaggtaattgcctgggcattcctataagcaggcgg
gaactctagtggtggatgtatttgtgcttgccctggctcagcctgcagga
gtgcaggcagaagtggtagaccatttgccagccaagaagcttgccctgtg
gaagtgtaggcggggagggggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_22928960_22930072
seq2: B6Ng01-191J03.b_43_1146

seq1  GAATTCTTGCATTTTATTTCAAATATATTTTTGATATAGTTATATATAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCATTTTATTTCAAATATATTTTTGATATAGTTATATATAAC  50

seq1  TCTATGTATTTTTCTTATCTGTATGTACTAAATACCTGATGTATTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTATTTTTCTTATCTGTATGTACTAAATACCTGATGTATTAAAAA  100

seq1  CCTAGAGTAATATCATGAAATAATTCATTTATTTTGTCTACCTGCTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAGTAATATCATGAAATAATTCATTTATTTTGTCTACCTGCTTCTG  150

seq1  TGTATTGATCTGTTTCATTTTTCATATTGGTAATCTGCATCTTCCCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGATCTGTTTCATTTTTCATATTGGTAATCTGCATCTTCCCTTTT  200

seq1  TTCATCCATTTGTATACTAAGCACTTATTATAATCATAAAATATTTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCATTTGTATACTAAGCACTTATTATAATCATAAAATATTTTGTA  250

seq1  ACAAGTAGATATTAAATTATATACCTTTAGATTCACTAATTTCTGCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAGATATTAAATTATATACCTTTAGATTCACTAATTTCTGCTCTT  300

seq1  CTAAAAATATCTTATTTTCTTAGGTGGATGTGTAAGAAATTGGTTTTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATATCTTATTTTCTTAGGTGGATGTGTAAGAAATTGGTTTTAGG  350

seq1  CCCTACTCCCTCTAAATAATTTTTTATTTTATTATGTTTTAAATGAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACTCCCTCTAAATAATTTTTTATTTTATTATGTTTTAAATGAGTGT  400

seq1  TTGCCTGTGTTTGTGTCTGTACACCATGTGGCCATGGAGACCAAGAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTGTTTGTGTCTGTACACCATGTGGCCATGGAGACCAAGAGATT  450

seq1  GGTGTCAAATTCCCCAGTACTGTGGTTAGAAATATCTGTGGGCCACCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAAATTCCCCAGTACTGTGGTTAGAAATATCTGTGGGCCACCACA  500

seq1  TAGGTGTTGGGACTTCCTAACTGCTGAGCCATTCATTAATTAGGTCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTTGGGACTTCCTAACTGCTGAGCCATTCATTAATTAGGTCTTTA  550

seq1  TTTCTTTAAGAACTACATGAAGTTGCATTTTCCATCTAAGCACTCTGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAAGAACTACATGAAGTTGCATTTTCCATCTAAGCACTCTGTTC  600

seq1  TATGAGTTGAAATACTCAATAATTTTGGAATACATTTAGTTTACACTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTTGAAATACTCAATAATTTTGGAATACATTTAGTTTACACTTTG  650

seq1  AACTTCTTCTTTGACCACATAAAAGTAAATCTTATCTTTTACTGATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTCTTTGACCACATAAAAGTAAATCTTATCTTTTACTGATTTAA  700

seq1  TTTTTTTACATTTTGGTATTTACCTATTAATACCATGTGACTACTAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTACATTTTGGTATTTACCTATTAATACCATGTGACTACTAAACA  750

seq1  TAATTTGTTCCATTTTTTCTTTCATATTTATTTATTCTACTTTTTGGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTTCCATTTTTTCTTTCATATTTATTTATTCTACTTTTTGGCTC  800

seq1  AGTTTGTGGTAAATTTGGGTGACTTTTCTGTTTTCTTAAAAAT-AACATA  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGTTTGTGGTAAATTTGGGTGACTTTTCTGTTTTCTTAAAAATAAACATA  850

seq1  TATCTCTTATGTTTATAGTCTTCAGCTATAATTTTATTGCTT-CCGCTAT  898
      ||||||||||||||||||||||||||||||| |||||||||| |||||||
seq2  TATCTCTTATGTTTATAGTCTTCAGCTATAA-TTTATTGCTTCCCGCTAT  899

seq1  GCTATTTTTGCTGTCTAAATGATGCCTAGACAGACATCCATTTTT-GTGC  947
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTATTTTTGCTGTCTAAATGATGCCTAGACAGACATCCATTTTTGGTGC  949

seq1  TAGGTCTACTGATTGCAGAGTGAAGACTGTTGAAACTA-TCAGTGTTCAA  996
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAGGTCTACTGATTGCAGAGTGAAGACTGTTGAAACTATTCAGTGTTCAA  999

seq1  AATATCCATCCTGGTTTATGTCATATTTTGTTTTGTCTTTTCTTTTGCCT  1046
      |||||||||||||| |||||||||||||   ||||||||| |  ||| | 
seq2  AATATCCATCCTGG-TTATGTCATATTT--GTTTGTCTTTCC--TTGGC-  1043

seq1  TTGTCACTTCATTTCTTTTATTTTTAAATTTTAAAAAAAGTATTTAGTTT  1096
      |||||||||||||||  ||| ||||||||||   |||||| |||||||||
seq2  TTGTCACTTCATTTC--TTAATTTTAAATTT---AAAAAG-ATTTAGTTT  1087

seq1  TGAGAATGAAACTAAAG  1113
      |||||||||||||||||
seq2  TGAGAATGAAACTAAAG  1104


seq1: chr3_23068913_23069137
seq2: B6Ng01-191J03.g_71_295 (reverse)

seq1  CTCCCCCCCTCCCCGCCTACACTTCCACAGGGCAAGCTTCTTGGCTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCCTCCCCGCCTACACTTCCACAGGGCAAGCTTCTTGGCTGGCA  50

seq1  AATGGTCTACCACTTCTGCCTGCACTCCTGCAGGCTGAGCCAGGGCAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCTACCACTTCTGCCTGCACTCCTGCAGGCTGAGCCAGGGCAAGC  100

seq1  ACAAATACATCCACCACTAGAGTTCCCGCCTGCTTATAGGAATGCCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATACATCCACCACTAGAGTTCCCGCCTGCTTATAGGAATGCCCAGG  150

seq1  CAATTACCTTCATGCCTTGGCCCGCAGAATGGGGACAGGTGCCTTCCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACCTTCATGCCTTGGCCCGCAGAATGGGGACAGGTGCCTTCCTTA  200

seq1  CCCGCACAGGTGTACCCATCCCAAG  225
      |||||||||||||||||||||||||
seq2  CCCGCACAGGTGTACCCATCCCAAG  225


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