BAC Information

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BAC

Clone NameB6Ng01-191J04
Chromosome3 (Build37)
Map Location 18,573,637 - 18,574,684
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
Downstream geneArmc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191J04.bB6Ng01-191J04.g
ACCGA015029GA015030
length1,0221,222
definitionB6Ng01-191J04.b B6Ng01-191J04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgtcctgtgtgcttcctagaaggtctagatcctcctgggggt
agtaccttaagtgtgcccagtgcaagggtccatcaaacctgtgcaaatag
gtgaggcactgtcctttaactgtgagttaaacaggtgaataaggttgtaa
ttgcccatgagtttactatttcaccagtttctccacctttgcaatttatc
acaggtgagcgttctctgtgttttgaagcatagtaagaaaaggaaaagtt
ttgtcatcagtgctaacaccattttactataaaggtataaaatattttat
ttatttgtgagaatatatggattagaccatatgcagatatatgaatgtgg
tagtcaaatggattggtcaaaatgaaaaaaaaaatggaatcaagtcctct
ccaagacaggtcctgttacatcctgtaatttataccttagaactctgaca
gagtcattttgagtgaggactgtagttctatttacaacgacaaccacatc
caaacaaaattatgcttccagtaagagtaatgattacttaattctttgga
aactttttttttttttttttttttttttttttttccgagacagggtttct
ctgtgtagccctgcctgtctgggaactcactctgtagaccaggctggcct
cgaactcagaaattcacctgcctctgcctcccgagtgctgggattaaagg
catgttgcgccaccacgcccggctcatataaatttacttttattaattta
aattttttcacaatgcaaagtaattgtttctttttgaccctaaagggtat
ataaatatactttatcaaaattactttaagattaaaaggtcagtttctta
aaagtgcatgaagtttgagtggagatcagagtcattttctttggggacat
ttggaaagatgtacaattctatttcttggctaagtagagatctaaaatat
ctgcccaacaacttaagtctttaagcatcattctgtgtaaaatcattaat
acccagtcatgttattactctc
gaattcttaattgaggaaaaccaaatggctgagaagcacttaaaaaaatg
tacaatatctaaataatcagggaaatgcaattcaaaacaaccctgagatt
ccacctcacaccagtcagaatgtctaagctcaaaaagtcaggtgacagca
gatgttggtgaggtcatggagaaaaaagaacactcctccattgctggtgg
ttttgcaaatcattttggcagttcctcagaaaattggacatagttctact
ggaagatccaacaatactactccggggcatatatccagaagatgctccaa
cttgtaataaggacacaggctccactatgttcatagcaaccttatttata
agccagaagctagaaagaacccagatgtccctcaacagaggaatggatac
agaaaatgtggtacatttacacagtggagtactacacaacaattaaaaac
aatgaatttatgaaattcttaggcaaattgacagatctggaggatatcat
cctgagtgaggtaacccaataataaatgaacacacatggtatacactcac
tgataagtggatattagcccagaagctcagaatacccaagatacagtttg
caaaacacatgaaactcaagaagaaagaccaaagtatggatatttggatt
cttcttagaagggggaacaaaatactcatggaaggagtaacagagacaaa
gtttggagtagagactgaaggaatgactatccagacactgctctacctgg
ggatccatcccataaacaatcagcaaacccagacactatatcagatgtca
gcaagagctagctgacaggagcctgataaagctgactcccgtgaggctct
gccagttcctgacaaatacagaagtggaggctcacagccatctattggag
gaagcacagagtttcccaatgaaggggctagaggaagtacccaagaagct
gaaggagtttgtagcccacatgaagaaacaacaatatgaactacccagta
cccccagaattccctgggactaaccaccaatcaaagaaaacacatggtga
gaactcattgactctagctgcatatgtagccaggaggatggcctagttgg
ttcatcaattgcaagggaaggcccttgatctgtgtaaagttctatgccta
gtataggcaatggctaggctagccagctagggaatagcagtggcgcttgg
cgcgtagcatcgacagagtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18573637_18574684
seq2: B6Ng01-191J04.b_46_1067 (reverse)

seq1  GAGAGGTTAATAACATTTGACTGTGGGTATTTATTGATTTTTACACAGAA  50
      |||||  ||||||||  ||||  |||||| ||| ||| ||||||||||||
seq2  GAGAG--TAATAACA--TGAC--TGGGTA-TTAATGA-TTTTACACAGAA  42

seq1  GTGATTGCTTTAAGAACTTAAAGTTGTAGGGCAGATATTTTTTAAGATCT  100
       ||| ||||| ||| |||| ||||||| |||||||||||||   ||||||
seq2  -TGA-TGCTTAAAG-ACTT-AAGTTGTTGGGCAGATATTTT---AGATCT  85

seq1  CTACTTTAGCAAAAAAAAAAAAAAAAAAAAATTGTACATCTTTCCAAATG  150
      |||| |||||          || ||| | |||||||||||||||||||||
seq2  CTAC-TTAGC---------CAAGAAATAGAATTGTACATCTTTCCAAATG  125

seq1  T-CCCAAAGAAAATGACTCTGATCTCAACTCAAACTTCATGCACTTTTTA  199
      | |||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  TCCCCAAAGAAAATGACTCTGATCTCCACTCAAACTTCATGCAC-TTTTA  174

seq1  AGAAACTGACTTTTTAATCTTAAAGTAATTTTGATAAAGTATATTTATAT  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTGACCTTTTAATCTTAAAGTAATTTTGATAAAGTATATTTATAT  224

seq1  ACCCTTTAGGGTCAAAAAGAAACAATTACTTTGCATTGTGAAAAAATTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTAGGGTCAAAAAGAAACAATTACTTTGCATTGTGAAAAAATTTA  274

seq1  AATTAATAAAAGTAAATTTATATGAGCCGGGCGTGGTGGCGCAACATGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAAAAGTAAATTTATATGAGCCGGGCGTGGTGGCGCAACATGCC  324

seq1  TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGAATTTCTGAGTTCGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGAATTTCTGAGTTCGAG  374

seq1  GCCAGCCTGGTCTACAGAGTGAGTTCCCAGACAGGCAGGGCTACACAGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGGTCTACAGAGTGAGTTCCCAGACAGGCAGGGCTACACAGAG  424

seq1  AAACCCTGTCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTT  499
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTCTCG-GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTT  473

seq1  CCAAAGAATTAAGTAATCATTACTCTTACTGGAAGCATAATTTTGTTTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAATTAAGTAATCATTACTCTTACTGGAAGCATAATTTTGTTTGG  523

seq1  ATGTGGTTGTCGTTGTAAATAGAACTACAGTCCTCACTCAAAATGACTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTTGTCGTTGTAAATAGAACTACAGTCCTCACTCAAAATGACTCT  573

seq1  GTCAGAGTTCTAAGGTATAAATTACAGGATGTAACAGGACCTGTCTTGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGTTCTAAGGTATAAATTACAGGATGTAACAGGACCTGTCTTGGA  623

seq1  GAGGACTTGATTCCATTTTTTTTTTCATTTTGACCAATCCATTTGACTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTTGATTCCATTTTTTTTTTCATTTTGACCAATCCATTTGACTAC  673

seq1  CACATTCATATATCTGCATATGGTCTAATCCATATATTCTCACAAATAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCATATATCTGCATATGGTCTAATCCATATATTCTCACAAATAAA  723

seq1  TAAAATATTTTATACCTTTATAGTAAAATGGTGTTAGCACTGATGACAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTTTATACCTTTATAGTAAAATGGTGTTAGCACTGATGACAAA  773

seq1  ACTTTTCCTTTTCTTACTATGCTTCAAAACACAGAGAACGCTCACCTGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCCTTTTCTTACTATGCTTCAAAACACAGAGAACGCTCACCTGTG  823

seq1  ATAAATTGCAAAGGTGGAGAAACTGGTGAAATAGTAAACTCATGGGCAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTGCAAAGGTGGAGAAACTGGTGAAATAGTAAACTCATGGGCAAT  873

seq1  TACAACCTTATTCACCTGTTTAACTCACAGTTAAAGGACAGTGCCTCACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCTTATTCACCTGTTTAACTCACAGTTAAAGGACAGTGCCTCACC  923

seq1  TATTTGCACAGGTTTGATGGACCCTTGCACTGGGCACACTTAAGGTACTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCACAGGTTTGATGGACCCTTGCACTGGGCACACTTAAGGTACTA  973

seq1  CCCCCAGGAGGATCTAGACCTTCTAGGAAGCACACAGGACATAGAATTC  1048
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGGAGGATCTAGACCTTCTAGGAAGCACACAGGACATAGAATTC  1022